EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020007509 (Gene tree)
Gene ID: -
Gene Symbol: thumpd3
Alias: -
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 18679 bases
Position: chr5:2609548-2628226
Accession: ZDB-GENE-030131-9745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025493	THUMP	PF02926.17	2.1e-10	1	1
ENSORLP00020025509	THUMP	PF02926.17	2.1e-10	1	1
ENSORLP00020025527	THUMP	PF02926.17	2.1e-10	1	1
ENSORLP00020025493	UPF0020	PF01170.18	1.8e-39	1	1
ENSORLP00020025509	UPF0020	PF01170.18	1.8e-39	1	1
ENSORLP00020025527	UPF0020	PF01170.18	1.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004260	-	2339	-	ENSORLP00020025509	478 (aa)	-	-
ENSORLT00020004212	-	2415	-	ENSORLP00020025527	478 (aa)	-	-
ENSORLT00020004299	-	2291	-	ENSORLP00020025493	478 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007509	thumpd3	93	57.082	ENSG00000134077	THUMPD3	93	57.928	Homo_sapiens
ENSORLG00020007509	thumpd3	97	80.665	ENSAPOG00000015836	thumpd3	99	80.665	Acanthochromis_polyacanthus
ENSORLG00020007509	thumpd3	94	58.836	ENSAMEG00000011321	THUMPD3	95	59.875	Ailuropoda_melanoleuca
ENSORLG00020007509	thumpd3	99	79.065	ENSACIG00000020096	thumpd3	99	79.108	Amphilophus_citrinellus
ENSORLG00020007509	thumpd3	99	79.675	ENSAOCG00000004399	thumpd3	99	80.081	Amphiprion_ocellaris
ENSORLG00020007509	thumpd3	99	80.325	ENSAPEG00000016740	thumpd3	99	80.730	Amphiprion_percula
ENSORLG00020007509	thumpd3	99	77.755	ENSATEG00000005345	thumpd3	99	77.551	Anabas_testudineus
ENSORLG00020007509	thumpd3	77	61.990	ENSAPLG00000003598	THUMPD3	99	62.755	Anas_platyrhynchos
ENSORLG00020007509	thumpd3	90	60.083	ENSACAG00000014974	THUMPD3	93	60.499	Anolis_carolinensis
ENSORLG00020007509	thumpd3	93	56.871	ENSANAG00000002365	THUMPD3	93	57.717	Aotus_nancymaae
ENSORLG00020007509	thumpd3	99	79.210	ENSACLG00000023333	thumpd3	97	79.210	Astatotilapia_calliptera
ENSORLG00020007509	thumpd3	84	54.612	ENSACLG00000013504	-	87	54.612	Astatotilapia_calliptera
ENSORLG00020007509	thumpd3	91	71.397	ENSAMXG00000015683	thumpd3	95	71.397	Astyanax_mexicanus
ENSORLG00020007509	thumpd3	94	59.044	ENSBTAG00000003112	THUMPD3	95	59.044	Bos_taurus
ENSORLG00020007509	thumpd3	86	36.779	WBGene00010846	M04B2.2	96	37.019	Caenorhabditis_elegans
ENSORLG00020007509	thumpd3	93	56.660	ENSCJAG00000015949	THUMPD3	93	57.505	Callithrix_jacchus
ENSORLG00020007509	thumpd3	75	59.326	ENSCAFG00000008060	-	93	60.363	Canis_familiaris
ENSORLG00020007509	thumpd3	94	59.044	ENSCAFG00000005499	THUMPD3	95	59.875	Canis_familiaris
ENSORLG00020007509	thumpd3	94	59.044	ENSCAFG00020008895	-	95	59.875	Canis_lupus_dingo
ENSORLG00020007509	thumpd3	80	60.341	ENSCAFG00020025887	-	94	61.314	Canis_lupus_dingo
ENSORLG00020007509	thumpd3	94	59.044	ENSCHIG00000024037	THUMPD3	94	59.459	Capra_hircus
ENSORLG00020007509	thumpd3	92	59.062	ENSTSYG00000000159	THUMPD3	92	59.062	Carlito_syrichta
ENSORLG00020007509	thumpd3	85	41.106	ENSCAPG00000017486	THUMPD3	83	41.346	Cavia_aperea
ENSORLG00020007509	thumpd3	91	58.734	ENSCPOG00000033287	THUMPD3	91	58.734	Cavia_porcellus
ENSORLG00020007509	thumpd3	91	52.165	ENSCCAG00000021429	-	93	52.967	Cebus_capucinus
ENSORLG00020007509	thumpd3	93	56.871	ENSCCAG00000027067	-	93	57.717	Cebus_capucinus
ENSORLG00020007509	thumpd3	93	57.082	ENSCATG00000040999	THUMPD3	93	57.928	Cercocebus_atys
ENSORLG00020007509	thumpd3	91	59.436	ENSCLAG00000000690	THUMPD3	91	59.436	Chinchilla_lanigera
ENSORLG00020007509	thumpd3	94	56.667	ENSCSAG00000010753	THUMPD3	95	57.500	Chlorocebus_sabaeus
ENSORLG00020007509	thumpd3	80	50.000	ENSCHOG00000012851	THUMPD3	79	50.000	Choloepus_hoffmanni
ENSORLG00020007509	thumpd3	89	61.771	ENSCPBG00000014771	THUMPD3	91	61.987	Chrysemys_picta_bellii
ENSORLG00020007509	thumpd3	90	43.488	ENSCSAVG00000008668	-	97	43.488	Ciona_savignyi
ENSORLG00020007509	thumpd3	93	57.082	ENSCANG00000031901	THUMPD3	93	57.928	Colobus_angolensis_palliatus
ENSORLG00020007509	thumpd3	91	59.436	ENSCGRG00001024117	Thumpd3	91	59.436	Cricetulus_griseus_chok1gshd
ENSORLG00020007509	thumpd3	91	59.436	ENSCGRG00000018116	Thumpd3	91	59.436	Cricetulus_griseus_crigri
ENSORLG00020007509	thumpd3	94	78.696	ENSCSEG00000002546	thumpd3	99	75.720	Cynoglossus_semilaevis
ENSORLG00020007509	thumpd3	94	80.652	ENSCVAG00000001019	thumpd3	98	76.923	Cyprinodon_variegatus
ENSORLG00020007509	thumpd3	95	67.091	ENSDARG00000059634	thumpd3	99	67.091	Danio_rerio
ENSORLG00020007509	thumpd3	95	58.004	ENSDNOG00000047668	THUMPD3	91	58.836	Dasypus_novemcinctus
ENSORLG00020007509	thumpd3	93	58.105	ENSDORG00000003257	Thumpd3	94	58.105	Dipodomys_ordii
ENSORLG00020007509	thumpd3	58	55.263	ENSETEG00000020239	-	59	56.250	Echinops_telfairi
ENSORLG00020007509	thumpd3	88	54.195	ENSEBUG00000004221	thumpd3	97	54.195	Eptatretus_burgeri
ENSORLG00020007509	thumpd3	94	57.796	ENSEASG00005013327	THUMPD3	95	58.420	Equus_asinus_asinus
ENSORLG00020007509	thumpd3	94	59.667	ENSECAG00000002016	THUMPD3	95	60.291	Equus_caballus
ENSORLG00020007509	thumpd3	95	53.498	ENSEEUG00000014696	THUMPD3	95	54.527	Erinaceus_europaeus
ENSORLG00020007509	thumpd3	89	77.673	ENSELUG00000018246	thumpd3	86	77.673	Esox_lucius
ENSORLG00020007509	thumpd3	92	58.333	ENSFCAG00000006171	THUMPD3	93	59.402	Felis_catus
ENSORLG00020007509	thumpd3	84	57.763	ENSFALG00000013631	THUMPD3	91	58.219	Ficedula_albicollis
ENSORLG00020007509	thumpd3	90	58.553	ENSFDAG00000014825	THUMPD3	90	59.868	Fukomys_damarensis
ENSORLG00020007509	thumpd3	99	78.340	ENSFHEG00000006006	thumpd3	99	78.947	Fundulus_heteroclitus
ENSORLG00020007509	thumpd3	92	70.444	ENSGMOG00000007923	thumpd3	92	71.333	Gadus_morhua
ENSORLG00020007509	thumpd3	89	58.887	ENSGALG00000044813	THUMPD3	94	60.385	Gallus_gallus
ENSORLG00020007509	thumpd3	99	78.586	ENSGAFG00000021645	thumpd3	99	78.586	Gambusia_affinis
ENSORLG00020007509	thumpd3	94	79.221	ENSGACG00000000930	thumpd3	98	79.221	Gasterosteus_aculeatus
ENSORLG00020007509	thumpd3	93	58.954	ENSGAGG00000022750	THUMPD3	97	58.954	Gopherus_agassizii
ENSORLG00020007509	thumpd3	93	56.660	ENSGGOG00000000604	THUMPD3	93	57.505	Gorilla_gorilla
ENSORLG00020007509	thumpd3	99	79.089	ENSHBUG00000013405	thumpd3	97	79.089	Haplochromis_burtoni
ENSORLG00020007509	thumpd3	91	57.826	ENSHGLG00000016200	THUMPD3	91	58.913	Heterocephalus_glaber_female
ENSORLG00020007509	thumpd3	93	49.894	ENSHGLG00100000505	-	96	50.743	Heterocephalus_glaber_male
ENSORLG00020007509	thumpd3	91	57.918	ENSHGLG00100017321	-	91	58.785	Heterocephalus_glaber_male
ENSORLG00020007509	thumpd3	95	77.322	ENSHCOG00000004871	thumpd3	97	77.970	Hippocampus_comes
ENSORLG00020007509	thumpd3	91	71.492	ENSIPUG00000019415	THUMPD3	92	71.492	Ictalurus_punctatus
ENSORLG00020007509	thumpd3	92	59.660	ENSSTOG00000003973	THUMPD3	93	59.660	Ictidomys_tridecemlineatus
ENSORLG00020007509	thumpd3	95	51.674	ENSJJAG00000017751	Thumpd3	93	52.720	Jaculus_jaculus
ENSORLG00020007509	thumpd3	99	78.675	ENSKMAG00000021025	thumpd3	93	78.675	Kryptolebias_marmoratus
ENSORLG00020007509	thumpd3	94	84.615	ENSLBEG00000012252	thumpd3	97	82.390	Labrus_bergylta
ENSORLG00020007509	thumpd3	90	61.171	ENSLACG00000018604	THUMPD3	90	61.656	Latimeria_chalumnae
ENSORLG00020007509	thumpd3	90	64.454	ENSLOCG00000009800	thumpd3	95	64.454	Lepisosteus_oculatus
ENSORLG00020007509	thumpd3	91	60.086	ENSLAFG00000005103	THUMPD3	92	60.086	Loxodonta_africana
ENSORLG00020007509	thumpd3	93	57.294	ENSMFAG00000044884	THUMPD3	93	58.140	Macaca_fascicularis
ENSORLG00020007509	thumpd3	93	57.294	ENSMMUG00000017307	THUMPD3	93	58.140	Macaca_mulatta
ENSORLG00020007509	thumpd3	93	57.294	ENSMNEG00000030529	THUMPD3	93	58.140	Macaca_nemestrina
ENSORLG00020007509	thumpd3	93	57.082	ENSMLEG00000032943	THUMPD3	93	57.928	Mandrillus_leucophaeus
ENSORLG00020007509	thumpd3	95	79.783	ENSMAMG00000023934	thumpd3	94	80.172	Mastacembelus_armatus
ENSORLG00020007509	thumpd3	99	79.210	ENSMZEG00005010623	thumpd3	97	79.210	Maylandia_zebra
ENSORLG00020007509	thumpd3	79	59.900	ENSMGAG00000010182	THUMPD3	100	61.153	Meleagris_gallopavo
ENSORLG00020007509	thumpd3	94	58.628	ENSMAUG00000012250	Thumpd3	95	58.628	Mesocricetus_auratus
ENSORLG00020007509	thumpd3	92	56.522	ENSMICG00000010095	THUMPD3	92	56.522	Microcebus_murinus
ENSORLG00020007509	thumpd3	93	57.474	ENSMOCG00000020148	Thumpd3	94	58.316	Microtus_ochrogaster
ENSORLG00020007509	thumpd3	99	78.706	ENSMMOG00000021791	thumpd3	97	81.678	Mola_mola
ENSORLG00020007509	thumpd3	95	55.102	ENSMODG00000004715	-	95	55.918	Monodelphis_domestica
ENSORLG00020007509	thumpd3	95	77.234	ENSMALG00000017316	thumpd3	99	77.234	Monopterus_albus
ENSORLG00020007509	thumpd3	57	53.872	MGP_CAROLIEiJ_G0028714	-	61	53.872	Mus_caroli
ENSORLG00020007509	thumpd3	93	57.505	ENSMUSG00000030264	Thumpd3	93	58.562	Mus_musculus
ENSORLG00020007509	thumpd3	90	58.772	MGP_PahariEiJ_G0022465	Thumpd3	92	59.698	Mus_pahari
ENSORLG00020007509	thumpd3	93	57.505	MGP_SPRETEiJ_G0029742	Thumpd3	93	58.562	Mus_spretus
ENSORLG00020007509	thumpd3	91	59.913	ENSMPUG00000017066	-	92	60.043	Mustela_putorius_furo
ENSORLG00020007509	thumpd3	91	54.605	ENSMPUG00000005219	-	91	54.825	Mustela_putorius_furo
ENSORLG00020007509	thumpd3	97	56.137	ENSMLUG00000008538	THUMPD3	97	56.942	Myotis_lucifugus
ENSORLG00020007509	thumpd3	90	58.862	ENSNGAG00000021014	-	90	59.737	Nannospalax_galili
ENSORLG00020007509	thumpd3	96	48.626	ENSNGAG00000001549	-	96	49.049	Nannospalax_galili
ENSORLG00020007509	thumpd3	99	78.882	ENSNBRG00000004886	thumpd3	97	78.882	Neolamprologus_brichardi
ENSORLG00020007509	thumpd3	93	57.082	ENSNLEG00000003863	THUMPD3	93	57.928	Nomascus_leucogenys
ENSORLG00020007509	thumpd3	81	59.466	ENSMEUG00000009819	THUMPD3	98	59.466	Notamacropus_eugenii
ENSORLG00020007509	thumpd3	81	58.838	ENSOPRG00000002020	THUMPD3	98	59.564	Ochotona_princeps
ENSORLG00020007509	thumpd3	69	55.899	ENSODEG00000018242	THUMPD3	100	57.022	Octodon_degus
ENSORLG00020007509	thumpd3	99	78.615	ENSONIG00000018977	thumpd3	99	79.022	Oreochromis_niloticus
ENSORLG00020007509	thumpd3	80	55.797	ENSOANG00000014481	THUMPD3	97	56.627	Ornithorhynchus_anatinus
ENSORLG00020007509	thumpd3	94	58.004	ENSOCUG00000010921	THUMPD3	95	57.456	Oryctolagus_cuniculus
ENSORLG00020007509	thumpd3	100	98.745	ENSORLG00000000676	thumpd3	100	98.745	Oryzias_latipes
ENSORLG00020007509	thumpd3	100	99.372	ENSORLG00015003615	thumpd3	100	99.372	Oryzias_latipes_hsok
ENSORLG00020007509	thumpd3	99	86.848	ENSOMEG00000014115	thumpd3	99	87.526	Oryzias_melastigma
ENSORLG00020007509	thumpd3	79	56.479	ENSOGAG00000017111	THUMPD3	99	57.702	Otolemur_garnettii
ENSORLG00020007509	thumpd3	97	58.032	ENSOARG00000007139	THUMPD3	95	58.434	Ovis_aries
ENSORLG00020007509	thumpd3	93	56.871	ENSPPAG00000025852	THUMPD3	93	57.717	Pan_paniscus
ENSORLG00020007509	thumpd3	92	59.149	ENSPPRG00000008071	THUMPD3	93	60.213	Panthera_pardus
ENSORLG00020007509	thumpd3	92	60.684	ENSPTIG00000017923	THUMPD3	93	60.684	Panthera_tigris_altaica
ENSORLG00020007509	thumpd3	93	56.871	ENSPTRG00000014585	THUMPD3	93	57.717	Pan_troglodytes
ENSORLG00020007509	thumpd3	96	55.918	ENSPANG00000016253	THUMPD3	96	56.735	Papio_anubis
ENSORLG00020007509	thumpd3	92	67.904	ENSPKIG00000014009	thumpd3	93	67.904	Paramormyrops_kingsleyae
ENSORLG00020007509	thumpd3	88	60.262	ENSPSIG00000007370	THUMPD3	91	59.698	Pelodiscus_sinensis
ENSORLG00020007509	thumpd3	92	78.202	ENSPMGG00000017563	thumpd3	94	78.202	Periophthalmus_magnuspinnatus
ENSORLG00020007509	thumpd3	93	57.773	ENSPEMG00000022411	Thumpd3	94	58.193	Peromyscus_maniculatus_bairdii
ENSORLG00020007509	thumpd3	90	54.362	ENSPMAG00000001291	thumpd3	99	55.257	Petromyzon_marinus
ENSORLG00020007509	thumpd3	91	58.511	ENSPCIG00000002049	THUMPD3	92	58.511	Phascolarctos_cinereus
ENSORLG00020007509	thumpd3	99	77.733	ENSPFOG00000002318	thumpd3	99	77.733	Poecilia_formosa
ENSORLG00020007509	thumpd3	99	77.733	ENSPLAG00000014804	thumpd3	99	77.733	Poecilia_latipinna
ENSORLG00020007509	thumpd3	99	77.733	ENSPMEG00000000582	thumpd3	99	77.733	Poecilia_mexicana
ENSORLG00020007509	thumpd3	99	78.471	ENSPREG00000009176	thumpd3	99	78.672	Poecilia_reticulata
ENSORLG00020007509	thumpd3	93	56.871	ENSPPYG00000029461	THUMPD3	93	57.717	Pongo_abelii
ENSORLG00020007509	thumpd3	88	45.309	ENSPPYG00000017616	-	89	45.309	Pongo_abelii
ENSORLG00020007509	thumpd3	80	59.080	ENSPCAG00000015398	THUMPD3	98	59.472	Procavia_capensis
ENSORLG00020007509	thumpd3	82	53.081	ENSPCOG00000023618	-	95	54.028	Propithecus_coquereli
ENSORLG00020007509	thumpd3	93	49.471	ENSPCOG00000018095	-	93	51.586	Propithecus_coquereli
ENSORLG00020007509	thumpd3	95	58.230	ENSPVAG00000008721	THUMPD3	96	58.230	Pteropus_vampyrus
ENSORLG00020007509	thumpd3	99	79.210	ENSPNYG00000006918	thumpd3	97	79.210	Pundamilia_nyererei
ENSORLG00020007509	thumpd3	94	69.956	ENSPNAG00000014936	thumpd3	95	69.956	Pygocentrus_nattereri
ENSORLG00020007509	thumpd3	94	56.639	ENSRNOG00000006941	Thumpd3	95	57.054	Rattus_norvegicus
ENSORLG00020007509	thumpd3	94	56.994	ENSRBIG00000035954	THUMPD3	95	57.829	Rhinopithecus_bieti
ENSORLG00020007509	thumpd3	94	56.785	ENSRROG00000035734	THUMPD3	95	57.620	Rhinopithecus_roxellana
ENSORLG00020007509	thumpd3	94	56.723	ENSSBOG00000023567	THUMPD3	96	58.190	Saimiri_boliviensis_boliviensis
ENSORLG00020007509	thumpd3	92	59.188	ENSSHAG00000014467	THUMPD3	93	59.236	Sarcophilus_harrisii
ENSORLG00020007509	thumpd3	96	67.300	ENSSFOG00015019210	thumpd3	96	67.300	Scleropages_formosus
ENSORLG00020007509	thumpd3	97	79.449	ENSSMAG00000000609	thumpd3	99	79.449	Scophthalmus_maximus
ENSORLG00020007509	thumpd3	99	79.466	ENSSDUG00000012179	thumpd3	99	80.085	Seriola_dumerili
ENSORLG00020007509	thumpd3	99	80.041	ENSSLDG00000022028	thumpd3	99	80.041	Seriola_lalandi_dorsalis
ENSORLG00020007509	thumpd3	78	66.234	ENSSARG00000002239	THUMPD3	79	66.234	Sorex_araneus
ENSORLG00020007509	thumpd3	94	59.426	ENSSPUG00000017461	THUMPD3	95	59.426	Sphenodon_punctatus
ENSORLG00020007509	thumpd3	99	78.937	ENSSPAG00000008345	thumpd3	98	79.226	Stegastes_partitus
ENSORLG00020007509	thumpd3	93	60.294	ENSSSCG00000011542	THUMPD3	94	60.924	Sus_scrofa
ENSORLG00020007509	thumpd3	88	61.745	ENSTGUG00000010440	THUMPD3	100	61.745	Taeniopygia_guttata
ENSORLG00020007509	thumpd3	94	71.239	ENSTRUG00000004420	thumpd3	96	71.239	Takifugu_rubripes
ENSORLG00020007509	thumpd3	92	80.227	ENSTNIG00000014627	thumpd3	96	80.227	Tetraodon_nigroviridis
ENSORLG00020007509	thumpd3	91	54.644	ENSTBEG00000003450	THUMPD3	90	55.724	Tupaia_belangeri
ENSORLG00020007509	thumpd3	93	57.962	ENSTTRG00000009694	THUMPD3	93	59.705	Tursiops_truncatus
ENSORLG00020007509	thumpd3	94	59.875	ENSUAMG00000009412	THUMPD3	95	59.875	Ursus_americanus
ENSORLG00020007509	thumpd3	94	62.664	ENSUMAG00000019241	THUMPD3	95	62.664	Ursus_maritimus
ENSORLG00020007509	thumpd3	79	55.392	ENSVPAG00000002855	THUMPD3	97	56.618	Vicugna_pacos
ENSORLG00020007509	thumpd3	94	59.044	ENSVVUG00000025278	THUMPD3	95	59.875	Vulpes_vulpes
ENSORLG00020007509	thumpd3	91	60.256	ENSXETG00000001447	thumpd3	91	60.256	Xenopus_tropicalis
ENSORLG00020007509	thumpd3	98	79.012	ENSXCOG00000000159	thumpd3	97	82.035	Xiphophorus_couchianus
ENSORLG00020007509	thumpd3	99	78.226	ENSXMAG00000001423	thumpd3	99	78.226	Xiphophorus_maculatus