EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020007518 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 118404 bases
Position: chr6:2156738-2275141
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020006633	zf-CCHC	PF00098.23	0.00035	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004254	-	975	-	ENSORLP00020006633	324 (aa)	-	-
ENSORLT00020004240	-	792	-	ENSORLP00020025531	263 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020007518	-	89	61.801	ENSORLG00020001780	-	88	61.801
ENSORLG00020007518	-	95	62.609	ENSORLG00020020969	-	86	62.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007518	-	55	30.899	ENSACAG00000027590	-	67	30.899	Anolis_carolinensis
ENSORLG00020007518	-	54	30.337	ENSACAG00000028040	-	69	30.337	Anolis_carolinensis
ENSORLG00020007518	-	56	30.435	ENSACAG00000026136	-	69	30.435	Anolis_carolinensis
ENSORLG00020007518	-	56	30.435	ENSACAG00000005423	-	78	30.435	Anolis_carolinensis
ENSORLG00020007518	-	56	30.601	ENSACAG00000023848	-	71	30.601	Anolis_carolinensis
ENSORLG00020007518	-	53	30.857	ENSACAG00000023852	-	68	30.857	Anolis_carolinensis
ENSORLG00020007518	-	53	30.508	ENSACAG00000001206	-	66	30.508	Anolis_carolinensis
ENSORLG00020007518	-	66	32.174	ENSAMXG00000036244	-	62	32.174	Astyanax_mexicanus
ENSORLG00020007518	-	90	31.613	ENSAMXG00000042165	-	83	31.613	Astyanax_mexicanus
ENSORLG00020007518	-	85	30.945	ENSFHEG00000001818	-	76	30.945	Fundulus_heteroclitus
ENSORLG00020007518	-	88	30.769	ENSHBUG00000010718	-	95	30.769	Haplochromis_burtoni
ENSORLG00020007518	-	87	32.063	ENSHCOG00000001473	-	89	32.063	Hippocampus_comes
ENSORLG00020007518	-	52	36.257	ENSLOCG00000010704	-	81	36.257	Lepisosteus_oculatus
ENSORLG00020007518	-	67	33.473	ENSMAMG00000007057	-	71	33.473	Mastacembelus_armatus
ENSORLG00020007518	-	66	31.466	ENSMZEG00005021915	-	71	32.906	Maylandia_zebra
ENSORLG00020007518	-	88	31.410	ENSMZEG00005007727	-	95	31.410	Maylandia_zebra
ENSORLG00020007518	-	95	77.581	ENSORLG00000023496	-	98	77.581	Oryzias_latipes
ENSORLG00020007518	-	91	78.354	ENSORLG00000029602	-	95	76.696	Oryzias_latipes
ENSORLG00020007518	-	94	57.726	ENSORLG00000027391	-	90	57.726	Oryzias_latipes
ENSORLG00020007518	-	69	35.628	ENSPREG00000001860	-	66	35.628	Poecilia_reticulata
ENSORLG00020007518	-	67	30.769	ENSPNAG00000011784	-	78	30.769	Pygocentrus_nattereri
ENSORLG00020007518	-	86	32.566	ENSPNAG00000026690	-	78	32.566	Pygocentrus_nattereri