EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020007525 (Gene tree)
Gene ID: -
Gene Symbol: polr3a
Alias: -
Full Name: polymerase (RNA) III (DNA directed) polypeptide A
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 20325 bases
Position: chr19:9641137-9661461
Accession: ZDB-GENE-050208-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020006572	RNA_pol_Rpb1_5	PF04998.17	1.5e-88	1	1
ENSORLP00020006483	RNA_pol_Rpb1_5	PF04998.17	1.5e-88	1	1
ENSORLP00020006626	RNA_pol_Rpb1_5	PF04998.17	1.7e-88	1	1
ENSORLP00020006626	RNA_pol_Rpb1_4	PF05000.17	1e-31	1	1
ENSORLP00020006572	RNA_pol_Rpb1_4	PF05000.17	1e-31	1	1
ENSORLP00020006483	RNA_pol_Rpb1_4	PF05000.17	2.6e-16	1	1
ENSORLP00020006483	RNA_pol_Rpb1_2	PF00623.20	1.6e-73	1	1
ENSORLP00020006572	RNA_pol_Rpb1_2	PF00623.20	1.6e-73	1	1
ENSORLP00020006626	RNA_pol_Rpb1_2	PF00623.20	1.6e-73	1	1
ENSORLP00020006572	RNA_pol_Rpb1_3	PF04983.18	3.7e-41	1	1
ENSORLP00020006626	RNA_pol_Rpb1_3	PF04983.18	3.8e-41	1	1
ENSORLP00020006483	RNA_pol_Rpb1_3	PF04983.18	3.8e-41	1	1
ENSORLP00020006626	RNA_pol_Rpb1_1	PF04997.12	1.1e-92	1	1
ENSORLP00020006483	RNA_pol_Rpb1_1	PF04997.12	1.1e-92	1	1
ENSORLP00020006572	RNA_pol_Rpb1_1	PF04997.12	1.1e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004360	-	5110	-	ENSORLP00020006572	1368 (aa)	-	-
ENSORLT00020004505	-	4098	-	ENSORLP00020006483	1365 (aa)	-	-
ENSORLT00020004262	-	5146	-	ENSORLP00020006626	1380 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020007525	polr3a	74	33.558	ENSORLG00020020726	polr1a	69	32.971
ENSORLG00020007525	polr3a	90	38.268	ENSORLG00020010235	polr2a	68	37.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007525	polr3a	98	90.164	ENSG00000148606	POLR3A	98	93.038	Homo_sapiens
ENSORLG00020007525	polr3a	63	92.915	ENSAPOG00000022727	polr3a	99	92.915	Acanthochromis_polyacanthus
ENSORLG00020007525	polr3a	98	89.888	ENSAMEG00000017801	POLR3A	100	87.437	Ailuropoda_melanoleuca
ENSORLG00020007525	polr3a	95	96.308	ENSACIG00000024504	polr3a	97	96.308	Amphilophus_citrinellus
ENSORLG00020007525	polr3a	98	96.349	ENSAOCG00000002071	polr3a	100	93.741	Amphiprion_ocellaris
ENSORLG00020007525	polr3a	98	92.846	ENSAOCG00000003949	-	100	90.432	Amphiprion_ocellaris
ENSORLG00020007525	polr3a	98	96.349	ENSAPEG00000013351	polr3a	100	93.741	Amphiprion_percula
ENSORLG00020007525	polr3a	98	96.125	ENSAPEG00000001966	-	100	93.525	Amphiprion_percula
ENSORLG00020007525	polr3a	98	96.274	ENSATEG00000023277	polr3a	100	93.525	Anabas_testudineus
ENSORLG00020007525	polr3a	97	90.882	ENSAPLG00000015878	POLR3A	99	88.218	Anas_platyrhynchos
ENSORLG00020007525	polr3a	95	89.534	ENSACAG00000007985	POLR3A	99	89.534	Anolis_carolinensis
ENSORLG00020007525	polr3a	98	87.435	ENSANAG00000028922	POLR3A	96	93.631	Aotus_nancymaae
ENSORLG00020007525	polr3a	98	96.125	ENSACLG00000005914	polr3a	99	95.949	Astatotilapia_calliptera
ENSORLG00020007525	polr3a	98	89.046	ENSAMXG00000018852	polr3a	99	86.671	Astyanax_mexicanus
ENSORLG00020007525	polr3a	98	90.238	ENSBTAG00000013259	POLR3A	100	87.698	Bos_taurus
ENSORLG00020007525	polr3a	98	56.433	WBGene00004411	rpc-1	99	55.093	Caenorhabditis_elegans
ENSORLG00020007525	polr3a	98	90.089	ENSCJAG00000001015	POLR3A	96	93.038	Callithrix_jacchus
ENSORLG00020007525	polr3a	98	90.089	ENSCAFG00000015546	POLR3A	100	87.626	Canis_familiaris
ENSORLG00020007525	polr3a	98	90.089	ENSCAFG00020014711	POLR3A	100	87.626	Canis_lupus_dingo
ENSORLG00020007525	polr3a	98	90.015	ENSCHIG00000000352	POLR3A	100	87.482	Capra_hircus
ENSORLG00020007525	polr3a	98	89.642	ENSTSYG00000006671	POLR3A	100	87.194	Carlito_syrichta
ENSORLG00020007525	polr3a	97	90.128	ENSCAPG00000016031	POLR3A	100	87.564	Cavia_aperea
ENSORLG00020007525	polr3a	98	90.164	ENSCPOG00000022387	POLR3A	100	87.626	Cavia_porcellus
ENSORLG00020007525	polr3a	98	88.748	ENSCCAG00000032995	POLR3A	96	93.038	Cebus_capucinus
ENSORLG00020007525	polr3a	98	90.164	ENSCATG00000035842	POLR3A	98	93.038	Cercocebus_atys
ENSORLG00020007525	polr3a	98	89.940	ENSCLAG00000009629	POLR3A	100	87.338	Chinchilla_lanigera
ENSORLG00020007525	polr3a	98	90.164	ENSCSAG00000009292	POLR3A	100	87.698	Chlorocebus_sabaeus
ENSORLG00020007525	polr3a	82	81.710	ENSCHOG00000008368	POLR3A	95	81.710	Choloepus_hoffmanni
ENSORLG00020007525	polr3a	98	90.462	ENSCPBG00000002079	POLR3A	97	90.462	Chrysemys_picta_bellii
ENSORLG00020007525	polr3a	98	69.048	ENSCSAVG00000009925	-	99	67.291	Ciona_savignyi
ENSORLG00020007525	polr3a	84	85.639	ENSCANG00000041071	POLR3A	98	92.405	Colobus_angolensis_palliatus
ENSORLG00020007525	polr3a	79	90.527	ENSCGRG00001015599	-	92	90.527	Cricetulus_griseus_chok1gshd
ENSORLG00020007525	polr3a	89	88.954	ENSCGRG00000001019	Polr3a	100	88.954	Cricetulus_griseus_crigri
ENSORLG00020007525	polr3a	98	95.753	ENSCSEG00000016653	polr3a	100	93.165	Cynoglossus_semilaevis
ENSORLG00020007525	polr3a	98	95.455	ENSCVAG00000023049	polr3a	100	93.022	Cyprinodon_variegatus
ENSORLG00020007525	polr3a	98	92.250	ENSDARG00000102569	polr3a	97	92.250	Danio_rerio
ENSORLG00020007525	polr3a	98	89.344	ENSDNOG00000010194	POLR3A	100	86.835	Dasypus_novemcinctus
ENSORLG00020007525	polr3a	98	90.238	ENSDORG00000000184	Polr3a	100	87.626	Dipodomys_ordii
ENSORLG00020007525	polr3a	98	56.761	FBgn0030687	CG17209	99	55.137	Drosophila_melanogaster
ENSORLG00020007525	polr3a	86	92.462	ENSETEG00000007477	POLR3A	89	89.879	Echinops_telfairi
ENSORLG00020007525	polr3a	60	76.464	ENSEBUG00000013761	polr3a	98	76.464	Eptatretus_burgeri
ENSORLG00020007525	polr3a	98	90.164	ENSEASG00005023053	POLR3A	100	87.626	Equus_asinus_asinus
ENSORLG00020007525	polr3a	98	89.807	ENSECAG00000019416	POLR3A	99	89.940	Equus_caballus
ENSORLG00020007525	polr3a	98	85.384	ENSEEUG00000001774	POLR3A	100	85.384	Erinaceus_europaeus
ENSORLG00020007525	polr3a	98	90.929	ENSELUG00000014016	polr3a	100	88.658	Esox_lucius
ENSORLG00020007525	polr3a	98	90.238	ENSFCAG00000000843	POLR3A	100	87.770	Felis_catus
ENSORLG00020007525	polr3a	98	90.469	ENSFALG00000006913	POLR3A	100	87.922	Ficedula_albicollis
ENSORLG00020007525	polr3a	98	90.313	ENSFDAG00000007813	POLR3A	100	87.770	Fukomys_damarensis
ENSORLG00020007525	polr3a	93	96.067	ENSFHEG00000011922	polr3a	95	96.067	Fundulus_heteroclitus
ENSORLG00020007525	polr3a	98	87.910	ENSGMOG00000000291	polr3a	99	85.633	Gadus_morhua
ENSORLG00020007525	polr3a	98	90.909	ENSGALG00000004947	POLR3A	100	88.273	Gallus_gallus
ENSORLG00020007525	polr3a	98	95.380	ENSGAFG00000005112	polr3a	100	92.950	Gambusia_affinis
ENSORLG00020007525	polr3a	98	94.113	ENSGACG00000002304	polr3a	100	91.727	Gasterosteus_aculeatus
ENSORLG00020007525	polr3a	97	89.864	ENSGAGG00000010386	POLR3A	98	89.932	Gopherus_agassizii
ENSORLG00020007525	polr3a	98	89.072	ENSGGOG00000027729	POLR3A	98	93.038	Gorilla_gorilla
ENSORLG00020007525	polr3a	98	96.051	ENSHBUG00000018098	polr3a	100	93.381	Haplochromis_burtoni
ENSORLG00020007525	polr3a	98	90.462	ENSHGLG00000017899	POLR3A	100	87.914	Heterocephalus_glaber_female
ENSORLG00020007525	polr3a	98	90.462	ENSHGLG00100008483	POLR3A	100	87.914	Heterocephalus_glaber_male
ENSORLG00020007525	polr3a	98	95.156	ENSHCOG00000001075	polr3a	100	92.230	Hippocampus_comes
ENSORLG00020007525	polr3a	98	90.164	ENSSTOG00000012983	POLR3A	100	87.698	Ictidomys_tridecemlineatus
ENSORLG00020007525	polr3a	98	95.421	ENSKMAG00000015290	polr3a	100	92.806	Kryptolebias_marmoratus
ENSORLG00020007525	polr3a	98	94.635	ENSLBEG00000017214	polr3a	97	94.635	Labrus_bergylta
ENSORLG00020007525	polr3a	98	87.732	ENSLACG00000018557	POLR3A	99	87.732	Latimeria_chalumnae
ENSORLG00020007525	polr3a	98	92.565	ENSLOCG00000004942	polr3a	100	89.878	Lepisosteus_oculatus
ENSORLG00020007525	polr3a	98	88.831	ENSLAFG00000016719	POLR3A	100	86.341	Loxodonta_africana
ENSORLG00020007525	polr3a	98	90.089	ENSMFAG00000032218	POLR3A	96	93.038	Macaca_fascicularis
ENSORLG00020007525	polr3a	98	90.089	ENSMMUG00000005514	POLR3A	98	93.038	Macaca_mulatta
ENSORLG00020007525	polr3a	98	83.346	ENSMNEG00000035163	POLR3A	99	89.324	Macaca_nemestrina
ENSORLG00020007525	polr3a	98	86.215	ENSMLEG00000030014	POLR3A	98	93.038	Mandrillus_leucophaeus
ENSORLG00020007525	polr3a	98	95.380	ENSMAMG00000017497	polr3a	100	92.878	Mastacembelus_armatus
ENSORLG00020007525	polr3a	98	96.125	ENSMZEG00005000576	polr3a	100	93.381	Maylandia_zebra
ENSORLG00020007525	polr3a	100	70.892	ENSMGAG00000005713	-	100	70.892	Meleagris_gallopavo
ENSORLG00020007525	polr3a	100	88.252	ENSMAUG00000016247	Polr3a	100	88.252	Mesocricetus_auratus
ENSORLG00020007525	polr3a	98	90.164	ENSMICG00000005937	POLR3A	100	88.271	Microcebus_murinus
ENSORLG00020007525	polr3a	98	90.238	ENSMOCG00000012185	Polr3a	100	87.698	Microtus_ochrogaster
ENSORLG00020007525	polr3a	98	94.933	ENSMMOG00000013822	polr3a	100	92.374	Mola_mola
ENSORLG00020007525	polr3a	98	89.866	ENSMODG00000001036	POLR3A	100	87.338	Monodelphis_domestica
ENSORLG00020007525	polr3a	98	95.455	ENSMALG00000001249	polr3a	100	92.950	Monopterus_albus
ENSORLG00020007525	polr3a	98	90.313	MGP_CAROLIEiJ_G0019016	Polr3a	100	87.770	Mus_caroli
ENSORLG00020007525	polr3a	98	90.313	ENSMUSG00000025280	Polr3a	100	87.770	Mus_musculus
ENSORLG00020007525	polr3a	98	90.238	MGP_PahariEiJ_G0030029	Polr3a	100	87.698	Mus_pahari
ENSORLG00020007525	polr3a	98	87.630	MGP_SPRETEiJ_G0019894	Polr3a	97	97.000	Mus_spretus
ENSORLG00020007525	polr3a	98	90.030	ENSMPUG00000003790	POLR3A	97	90.030	Mustela_putorius_furo
ENSORLG00020007525	polr3a	98	89.046	ENSMLUG00000011522	POLR3A	100	86.619	Myotis_lucifugus
ENSORLG00020007525	polr3a	98	88.823	ENSNGAG00000015863	Polr3a	100	86.331	Nannospalax_galili
ENSORLG00020007525	polr3a	98	94.113	ENSNBRG00000014262	polr3a	100	91.511	Neolamprologus_brichardi
ENSORLG00020007525	polr3a	86	83.421	ENSNLEG00000010501	POLR3A	92	80.519	Nomascus_leucogenys
ENSORLG00020007525	polr3a	99	77.164	ENSMEUG00000012446	POLR3A	100	77.164	Notamacropus_eugenii
ENSORLG00020007525	polr3a	98	85.544	ENSOPRG00000001880	-	100	83.165	Ochotona_princeps
ENSORLG00020007525	polr3a	98	89.717	ENSODEG00000015146	POLR3A	100	87.050	Octodon_degus
ENSORLG00020007525	polr3a	98	96.349	ENSONIG00000016129	polr3a	100	93.669	Oreochromis_niloticus
ENSORLG00020007525	polr3a	97	89.705	ENSOANG00000007013	POLR3A	100	87.217	Ornithorhynchus_anatinus
ENSORLG00020007525	polr3a	98	90.015	ENSOCUG00000012450	POLR3A	100	87.482	Oryctolagus_cuniculus
ENSORLG00020007525	polr3a	98	99.852	ENSORLG00000008958	polr3a	100	97.482	Oryzias_latipes
ENSORLG00020007525	polr3a	98	99.852	ENSORLG00015006633	polr3a	100	97.482	Oryzias_latipes_hsok
ENSORLG00020007525	polr3a	98	97.392	ENSOMEG00000012865	polr3a	100	95.252	Oryzias_melastigma
ENSORLG00020007525	polr3a	98	90.015	ENSOGAG00000010995	POLR3A	100	87.482	Otolemur_garnettii
ENSORLG00020007525	polr3a	98	89.881	ENSOARG00000009656	POLR3A	100	87.356	Ovis_aries
ENSORLG00020007525	polr3a	98	90.238	ENSPPRG00000002128	POLR3A	100	87.770	Panthera_pardus
ENSORLG00020007525	polr3a	98	90.238	ENSPTIG00000020916	POLR3A	100	87.770	Panthera_tigris_altaica
ENSORLG00020007525	polr3a	98	90.238	ENSPTRG00000002664	POLR3A	98	93.038	Pan_troglodytes
ENSORLG00020007525	polr3a	98	90.089	ENSPANG00000022508	POLR3A	98	93.038	Papio_anubis
ENSORLG00020007525	polr3a	98	92.623	ENSPKIG00000008140	polr3a	100	90.072	Paramormyrops_kingsleyae
ENSORLG00020007525	polr3a	97	90.310	ENSPSIG00000002092	POLR3A	100	87.728	Pelodiscus_sinensis
ENSORLG00020007525	polr3a	98	90.015	ENSPEMG00000006768	Polr3a	100	87.482	Peromyscus_maniculatus_bairdii
ENSORLG00020007525	polr3a	98	89.791	ENSPCIG00000015842	POLR3A	100	87.266	Phascolarctos_cinereus
ENSORLG00020007525	polr3a	51	97.561	ENSPFOG00000006458	polr3a	100	92.886	Poecilia_formosa
ENSORLG00020007525	polr3a	98	95.902	ENSPLAG00000000997	polr3a	100	93.453	Poecilia_latipinna
ENSORLG00020007525	polr3a	98	95.827	ENSPMEG00000006821	polr3a	100	93.381	Poecilia_mexicana
ENSORLG00020007525	polr3a	98	95.678	ENSPREG00000002385	polr3a	100	93.309	Poecilia_reticulata
ENSORLG00020007525	polr3a	91	90.024	ENSPPYG00000002305	POLR3A	99	87.374	Pongo_abelii
ENSORLG00020007525	polr3a	86	78.435	ENSPCAG00000005690	POLR3A	87	78.435	Procavia_capensis
ENSORLG00020007525	polr3a	98	90.015	ENSPCOG00000028311	POLR3A	100	87.554	Propithecus_coquereli
ENSORLG00020007525	polr3a	98	88.599	ENSPVAG00000015553	POLR3A	100	86.187	Pteropus_vampyrus
ENSORLG00020007525	polr3a	98	96.051	ENSPNYG00000020987	polr3a	100	93.309	Pundamilia_nyererei
ENSORLG00020007525	polr3a	98	88.227	ENSPNAG00000006629	polr3a	99	85.951	Pygocentrus_nattereri
ENSORLG00020007525	polr3a	98	90.164	ENSRNOG00000010008	Polr3a	100	87.626	Rattus_norvegicus
ENSORLG00020007525	polr3a	98	86.289	ENSRBIG00000034967	POLR3A	98	93.038	Rhinopithecus_bieti
ENSORLG00020007525	polr3a	98	89.940	ENSRROG00000025527	POLR3A	98	93.038	Rhinopithecus_roxellana
ENSORLG00020007525	polr3a	98	49.576	YOR116C	RPO31	98	48.164	Saccharomyces_cerevisiae
ENSORLG00020007525	polr3a	98	90.164	ENSSBOG00000022199	POLR3A	95	93.038	Saimiri_boliviensis_boliviensis
ENSORLG00020007525	polr3a	98	89.717	ENSSHAG00000007588	POLR3A	94	87.338	Sarcophilus_harrisii
ENSORLG00020007525	polr3a	98	93.517	ENSSFOG00015014357	polr3a	100	90.935	Scleropages_formosus
ENSORLG00020007525	polr3a	98	95.380	ENSSMAG00000001780	polr3a	100	92.734	Scophthalmus_maximus
ENSORLG00020007525	polr3a	98	96.125	ENSSDUG00000019840	polr3a	100	93.525	Seriola_dumerili
ENSORLG00020007525	polr3a	98	96.125	ENSSLDG00000023908	polr3a	100	93.525	Seriola_lalandi_dorsalis
ENSORLG00020007525	polr3a	68	89.969	ENSSARG00000009916	POLR3A	86	89.969	Sorex_araneus
ENSORLG00020007525	polr3a	98	88.301	ENSSPUG00000013209	POLR3A	100	85.827	Sphenodon_punctatus
ENSORLG00020007525	polr3a	98	96.274	ENSSPAG00000017712	polr3a	100	93.741	Stegastes_partitus
ENSORLG00020007525	polr3a	91	97.826	ENSSSCG00000010327	POLR3A	96	97.826	Sus_scrofa
ENSORLG00020007525	polr3a	98	90.686	ENSTGUG00000006423	-	100	88.058	Taeniopygia_guttata
ENSORLG00020007525	polr3a	98	95.007	ENSTRUG00000013488	polr3a	100	92.230	Takifugu_rubripes
ENSORLG00020007525	polr3a	98	95.387	ENSTNIG00000013151	polr3a	100	92.744	Tetraodon_nigroviridis
ENSORLG00020007525	polr3a	70	91.489	ENSTBEG00000015288	POLR3A	75	91.489	Tupaia_belangeri
ENSORLG00020007525	polr3a	100	84.187	ENSTTRG00000007817	POLR3A	100	84.187	Tursiops_truncatus
ENSORLG00020007525	polr3a	100	87.798	ENSUAMG00000011283	POLR3A	100	87.798	Ursus_americanus
ENSORLG00020007525	polr3a	98	90.089	ENSUMAG00000013913	POLR3A	100	87.626	Ursus_maritimus
ENSORLG00020007525	polr3a	97	81.688	ENSVPAG00000003285	POLR3A	100	79.564	Vicugna_pacos
ENSORLG00020007525	polr3a	98	90.089	ENSVVUG00000025523	POLR3A	100	87.626	Vulpes_vulpes
ENSORLG00020007525	polr3a	88	90.226	ENSXETG00000018101	polr3a	100	90.226	Xenopus_tropicalis
ENSORLG00020007525	polr3a	98	95.678	ENSXMAG00000015213	polr3a	98	95.629	Xiphophorus_maculatus