EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020007542 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 2592 bases
Position: chr10:4184465-4187056
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020006687	RVT_1	PF00078.27	1.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004160	-	2592	-	ENSORLP00020006687	836 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020007542	-	94	99.873	ENSORLG00020013618	-	100	99.873
ENSORLG00020007542	-	97	30.529	ENSORLG00020004575	-	65	30.529
ENSORLG00020007542	-	60	30.426	ENSORLG00020001651	-	60	30.426
ENSORLG00020007542	-	77	30.876	ENSORLG00020013149	-	71	30.876
ENSORLG00020007542	-	99	43.623	ENSORLG00020016870	-	67	43.623
ENSORLG00020007542	-	81	44.802	ENSORLG00020008557	-	62	44.802
ENSORLG00020007542	-	65	49.084	ENSORLG00020018783	-	55	49.084
ENSORLG00020007542	-	92	44.961	ENSORLG00020008765	-	98	44.961
ENSORLG00020007542	-	77	30.415	ENSORLG00020003980	-	78	30.415
ENSORLG00020007542	-	97	30.299	ENSORLG00020017758	-	65	30.299
ENSORLG00020007542	-	97	30.409	ENSORLG00020005656	-	65	30.409
ENSORLG00020007542	-	94	99.746	ENSORLG00020013755	-	100	99.746
ENSORLG00020007542	-	97	30.529	ENSORLG00020018889	-	65	30.529
ENSORLG00020007542	-	97	30.120	ENSORLG00020011033	-	65	30.120
ENSORLG00020007542	-	58	52.697	ENSORLG00020021090	-	54	52.697
ENSORLG00020007542	-	60	31.818	ENSORLG00020005776	-	53	31.818
ENSORLG00020007542	-	50	33.179	ENSORLG00020014626	-	79	33.179
ENSORLG00020007542	-	100	99.761	ENSORLG00020016067	-	90	99.761
ENSORLG00020007542	-	58	52.490	ENSORLG00020006818	-	54	52.490
ENSORLG00020007542	-	97	30.288	ENSORLG00020002923	-	65	30.288
ENSORLG00020007542	-	98	42.597	ENSORLG00020021337	-	81	42.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007542	-	99	43.894	ENSACLG00000014667	-	67	43.894	Astatotilapia_calliptera
ENSORLG00020007542	-	99	43.410	ENSACLG00000006792	-	68	43.410	Astatotilapia_calliptera
ENSORLG00020007542	-	90	43.461	ENSACLG00000016372	-	64	43.684	Astatotilapia_calliptera
ENSORLG00020007542	-	81	44.380	ENSACLG00000005544	-	61	44.380	Astatotilapia_calliptera
ENSORLG00020007542	-	98	44.310	ENSAMXG00000030338	-	73	44.310	Astyanax_mexicanus
ENSORLG00020007542	-	99	46.274	ENSDARG00000100925	CU104709.1	66	46.274	Danio_rerio
ENSORLG00020007542	-	66	57.923	ENSDARG00000098557	BX323564.1	57	57.923	Danio_rerio
ENSORLG00020007542	-	97	30.238	ENSDARG00000105157	BX649434.3	61	30.238	Danio_rerio
ENSORLG00020007542	-	66	57.923	ENSDARG00000086849	si:dkey-187k19.2	96	57.923	Danio_rerio
ENSORLG00020007542	-	99	53.828	ENSDARG00000099710	BX284696.1	67	53.828	Danio_rerio
ENSORLG00020007542	-	99	51.675	ENSDARG00000103841	CU024870.1	68	51.675	Danio_rerio
ENSORLG00020007542	-	99	51.675	ENSDARG00000103976	BX544877.1	67	51.675	Danio_rerio
ENSORLG00020007542	-	100	57.637	ENSDARG00000105300	BX927081.1	67	57.637	Danio_rerio
ENSORLG00020007542	-	99	53.708	ENSDARG00000100234	BX511246.1	67	53.708	Danio_rerio
ENSORLG00020007542	-	97	42.910	ENSKMAG00000014582	-	66	42.910	Kryptolebias_marmoratus
ENSORLG00020007542	-	70	47.966	ENSKMAG00000018235	-	63	47.966	Kryptolebias_marmoratus
ENSORLG00020007542	-	99	42.823	ENSKMAG00000011717	-	66	42.823	Kryptolebias_marmoratus
ENSORLG00020007542	-	55	30.801	ENSLOCG00000000597	-	100	30.801	Lepisosteus_oculatus
ENSORLG00020007542	-	72	39.274	ENSLOCG00000000531	-	98	39.274	Lepisosteus_oculatus
ENSORLG00020007542	-	97	44.103	ENSONIG00000020693	-	97	44.103	Oreochromis_niloticus
ENSORLG00020007542	-	100	98.804	ENSORLG00000027382	-	67	98.804	Oryzias_latipes
ENSORLG00020007542	-	98	45.676	ENSORLG00000022718	-	66	45.676	Oryzias_latipes
ENSORLG00020007542	-	98	45.212	ENSORLG00000024817	-	88	45.212	Oryzias_latipes
ENSORLG00020007542	-	99	44.577	ENSORLG00000028372	-	86	44.577	Oryzias_latipes
ENSORLG00020007542	-	98	45.752	ENSORLG00000021884	-	66	45.752	Oryzias_latipes
ENSORLG00020007542	-	99	44.815	ENSORLG00000027203	-	67	44.815	Oryzias_latipes
ENSORLG00020007542	-	91	43.540	ENSORLG00000030600	-	65	43.540	Oryzias_latipes
ENSORLG00020007542	-	79	46.154	ENSORLG00000022810	-	60	46.154	Oryzias_latipes
ENSORLG00020007542	-	99	45.138	ENSORLG00000028539	-	66	45.138	Oryzias_latipes
ENSORLG00020007542	-	66	99.089	ENSORLG00000028041	-	57	99.089	Oryzias_latipes
ENSORLG00020007542	-	98	46.041	ENSORLG00000024361	-	66	46.041	Oryzias_latipes
ENSORLG00020007542	-	99	44.778	ENSORLG00000025257	-	66	44.778	Oryzias_latipes
ENSORLG00020007542	-	69	47.160	ENSORLG00000030108	-	58	47.160	Oryzias_latipes
ENSORLG00020007542	-	99	43.623	ENSORLG00000027316	-	67	43.623	Oryzias_latipes
ENSORLG00020007542	-	99	44.898	ENSORLG00000028184	-	66	44.898	Oryzias_latipes
ENSORLG00020007542	-	99	45.173	ENSORLG00000027038	-	67	45.173	Oryzias_latipes
ENSORLG00020007542	-	99	45.290	ENSORLG00000022021	-	66	45.290	Oryzias_latipes
ENSORLG00020007542	-	79	45.468	ENSORLG00000026865	-	61	45.468	Oryzias_latipes
ENSORLG00020007542	-	82	46.254	ENSORLG00000027119	-	62	46.254	Oryzias_latipes
ENSORLG00020007542	-	99	44.498	ENSORLG00015014452	-	67	44.498	Oryzias_latipes_hsok
ENSORLG00020007542	-	52	46.330	ENSORLG00015017584	-	62	46.330	Oryzias_latipes_hsok
ENSORLG00020007542	-	99	42.238	ENSORLG00015007330	-	67	42.238	Oryzias_latipes_hsok
ENSORLG00020007542	-	99	44.994	ENSORLG00015021204	-	98	44.994	Oryzias_latipes_hsok
ENSORLG00020007542	-	98	45.631	ENSORLG00015019816	-	66	45.631	Oryzias_latipes_hsok
ENSORLG00020007542	-	98	45.631	ENSORLG00015019437	-	84	45.631	Oryzias_latipes_hsok
ENSORLG00020007542	-	99	44.578	ENSOMEG00000021029	-	77	44.578	Oryzias_melastigma
ENSORLG00020007542	-	97	30.325	ENSOMEG00000013951	-	63	30.153	Oryzias_melastigma
ENSORLG00020007542	-	81	42.710	ENSOMEG00000015408	-	62	42.710	Oryzias_melastigma
ENSORLG00020007542	-	92	44.057	ENSPKIG00000020531	-	73	44.057	Paramormyrops_kingsleyae
ENSORLG00020007542	-	93	38.119	ENSPFOG00000013154	-	96	37.962	Poecilia_formosa
ENSORLG00020007542	-	65	44.853	ENSPFOG00000023623	-	83	44.853	Poecilia_formosa
ENSORLG00020007542	-	90	31.332	ENSSDUG00000015400	-	61	31.332	Seriola_dumerili
ENSORLG00020007542	-	82	46.734	ENSXMAG00000026019	-	62	46.734	Xiphophorus_maculatus
ENSORLG00020007542	-	85	45.404	ENSXMAG00000024671	-	63	45.404	Xiphophorus_maculatus
ENSORLG00020007542	-	98	30.559	ENSXMAG00000028372	-	63	30.559	Xiphophorus_maculatus
ENSORLG00020007542	-	82	47.033	ENSXMAG00000022515	-	71	47.033	Xiphophorus_maculatus