EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020007561 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 23891 bases
Position: chr1:24981338-25005228
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020006618	TRM	PF02005.16	1.3e-139	1	1
ENSORLP00020006646	TRM	PF02005.16	2.7e-139	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004282	-	1965	-	ENSORLP00020006618	654 (aa)	-	-
ENSORLT00020004236	-	1899	-	ENSORLP00020006646	632 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007561	trmt1	89	65.849	ENSG00000104907	TRMT1	100	72.775	Homo_sapiens
ENSORLG00020007561	trmt1	91	64.433	ENSAMEG00000012598	TRMT1	87	64.605	Ailuropoda_melanoleuca
ENSORLG00020007561	trmt1	96	77.213	ENSACIG00000018680	trmt1	99	76.715	Amphilophus_citrinellus
ENSORLG00020007561	trmt1	99	81.442	ENSAOCG00000006781	trmt1	98	81.442	Amphiprion_ocellaris
ENSORLG00020007561	trmt1	99	81.595	ENSAPEG00000007712	trmt1	98	81.595	Amphiprion_percula
ENSORLG00020007561	trmt1	98	82.372	ENSATEG00000001872	trmt1	99	80.211	Anabas_testudineus
ENSORLG00020007561	trmt1	94	64.058	ENSACAG00000003825	TRMT1	99	64.058	Anolis_carolinensis
ENSORLG00020007561	trmt1	90	64.634	ENSANAG00000023016	TRMT1	92	64.634	Aotus_nancymaae
ENSORLG00020007561	trmt1	97	80.844	ENSACLG00000010073	trmt1	99	81.683	Astatotilapia_calliptera
ENSORLG00020007561	trmt1	98	73.450	ENSAMXG00000012026	trmt1	94	73.450	Astyanax_mexicanus
ENSORLG00020007561	trmt1	90	64.360	ENSBTAG00000019325	TRMT1	82	64.533	Bos_taurus
ENSORLG00020007561	trmt1	81	40.952	WBGene00006613	trm-1	93	40.952	Caenorhabditis_elegans
ENSORLG00020007561	trmt1	89	63.525	ENSCJAG00000004566	TRMT1	88	63.525	Callithrix_jacchus
ENSORLG00020007561	trmt1	91	64.605	ENSCAFG00000017070	TRMT1	91	64.777	Canis_familiaris
ENSORLG00020007561	trmt1	94	62.520	ENSCAFG00020005397	TRMT1	94	62.623	Canis_lupus_dingo
ENSORLG00020007561	trmt1	90	64.767	ENSCHIG00000013569	TRMT1	87	64.767	Capra_hircus
ENSORLG00020007561	trmt1	89	63.351	ENSTSYG00000003207	TRMT1	87	63.462	Carlito_syrichta
ENSORLG00020007561	trmt1	84	60.829	ENSCAPG00000003355	TRMT1	94	61.205	Cavia_aperea
ENSORLG00020007561	trmt1	89	64.747	ENSCPOG00000011754	TRMT1	87	65.096	Cavia_porcellus
ENSORLG00020007561	trmt1	92	62.267	ENSCCAG00000022263	TRMT1	92	63.398	Cebus_capucinus
ENSORLG00020007561	trmt1	89	65.499	ENSCATG00000039850	TRMT1	86	65.499	Cercocebus_atys
ENSORLG00020007561	trmt1	79	53.913	ENSCATG00000038220	-	90	53.913	Cercocebus_atys
ENSORLG00020007561	trmt1	89	65.499	ENSCLAG00000015295	TRMT1	89	63.351	Chinchilla_lanigera
ENSORLG00020007561	trmt1	75	67.932	ENSCSAG00000006500	TRMT1	89	67.932	Chlorocebus_sabaeus
ENSORLG00020007561	trmt1	89	69.406	ENSCPBG00000023866	TRMT1	85	70.547	Chrysemys_picta_bellii
ENSORLG00020007561	trmt1	87	47.276	ENSCING00000002884	-	99	47.535	Ciona_intestinalis
ENSORLG00020007561	trmt1	85	50.551	ENSCSAVG00000010927	-	100	49.632	Ciona_savignyi
ENSORLG00020007561	trmt1	86	50.725	ENSCANG00000031650	-	86	50.998	Colobus_angolensis_palliatus
ENSORLG00020007561	trmt1	89	52.273	ENSCANG00000040631	TRMT1	86	52.273	Colobus_angolensis_palliatus
ENSORLG00020007561	trmt1	89	64.965	ENSCGRG00001022594	Trmt1	87	65.026	Cricetulus_griseus_chok1gshd
ENSORLG00020007561	trmt1	89	64.965	ENSCGRG00000017732	Trmt1	86	65.026	Cricetulus_griseus_crigri
ENSORLG00020007561	trmt1	97	79.119	ENSCSEG00000001643	trmt1	100	76.233	Cynoglossus_semilaevis
ENSORLG00020007561	trmt1	98	80.906	ENSCVAG00000011886	trmt1	98	79.535	Cyprinodon_variegatus
ENSORLG00020007561	trmt1	99	72.231	ENSDARG00000010978	trmt1	95	72.231	Danio_rerio
ENSORLG00020007561	trmt1	81	43.346	ENSDNOG00000048240	-	89	43.536	Dasypus_novemcinctus
ENSORLG00020007561	trmt1	95	59.652	ENSDORG00000014298	Trmt1	94	59.652	Dipodomys_ordii
ENSORLG00020007561	trmt1	87	48.036	FBgn0032430	CG6388	95	48.036	Drosophila_melanogaster
ENSORLG00020007561	trmt1	50	64.103	ENSETEG00000015483	-	50	64.103	Echinops_telfairi
ENSORLG00020007561	trmt1	81	51.663	ENSEBUG00000003449	trmt1	75	51.845	Eptatretus_burgeri
ENSORLG00020007561	trmt1	90	64.111	ENSEASG00005004050	TRMT1	90	64.286	Equus_asinus_asinus
ENSORLG00020007561	trmt1	90	64.111	ENSECAG00000016149	TRMT1	90	64.286	Equus_caballus
ENSORLG00020007561	trmt1	62	55.556	ENSEEUG00000014102	-	100	56.203	Erinaceus_europaeus
ENSORLG00020007561	trmt1	91	77.015	ENSELUG00000021659	trmt1	87	77.663	Esox_lucius
ENSORLG00020007561	trmt1	89	64.522	ENSFCAG00000000483	TRMT1	87	64.696	Felis_catus
ENSORLG00020007561	trmt1	89	64.860	ENSFDAG00000007386	TRMT1	87	65.035	Fukomys_damarensis
ENSORLG00020007561	trmt1	87	82.696	ENSFHEG00000012865	trmt1	97	80.379	Fundulus_heteroclitus
ENSORLG00020007561	trmt1	90	72.456	ENSGMOG00000006564	trmt1	99	73.286	Gadus_morhua
ENSORLG00020007561	trmt1	96	82.810	ENSGAFG00000011862	trmt1	96	81.994	Gambusia_affinis
ENSORLG00020007561	trmt1	90	80.210	ENSGACG00000000227	trmt1	93	81.930	Gasterosteus_aculeatus
ENSORLG00020007561	trmt1	89	69.930	ENSGAGG00000016432	TRMT1	85	70.671	Gopherus_agassizii
ENSORLG00020007561	trmt1	89	66.025	ENSGGOG00000014007	TRMT1	87	66.025	Gorilla_gorilla
ENSORLG00020007561	trmt1	87	74.727	ENSHBUG00000008821	trmt1	92	75.774	Haplochromis_burtoni
ENSORLG00020007561	trmt1	89	64.572	ENSHGLG00000015972	TRMT1	87	64.747	Heterocephalus_glaber_female
ENSORLG00020007561	trmt1	89	60.453	ENSHGLG00100018112	TRMT1	87	60.627	Heterocephalus_glaber_male
ENSORLG00020007561	trmt1	96	75.896	ENSHCOG00000009447	trmt1	94	77.138	Hippocampus_comes
ENSORLG00020007561	trmt1	90	74.914	ENSIPUG00000002899	trmt1	94	70.846	Ictalurus_punctatus
ENSORLG00020007561	trmt1	90	64.747	ENSSTOG00000012531	TRMT1	88	64.921	Ictidomys_tridecemlineatus
ENSORLG00020007561	trmt1	89	65.505	ENSJJAG00000017154	Trmt1	88	65.913	Jaculus_jaculus
ENSORLG00020007561	trmt1	99	80.894	ENSKMAG00000011809	trmt1	98	84.075	Kryptolebias_marmoratus
ENSORLG00020007561	trmt1	98	80.480	ENSLBEG00000012703	trmt1	100	77.645	Labrus_bergylta
ENSORLG00020007561	trmt1	90	59.413	ENSLACG00000014585	TRMT1	94	60.035	Latimeria_chalumnae
ENSORLG00020007561	trmt1	90	68.007	ENSLOCG00000006479	trmt1	99	68.476	Lepisosteus_oculatus
ENSORLG00020007561	trmt1	89	65.331	ENSLAFG00000014072	TRMT1	88	65.505	Loxodonta_africana
ENSORLG00020007561	trmt1	89	65.499	ENSMFAG00000033143	TRMT1	86	65.499	Macaca_fascicularis
ENSORLG00020007561	trmt1	89	62.148	ENSMMUG00000001167	TRMT1	87	62.148	Macaca_mulatta
ENSORLG00020007561	trmt1	89	65.324	ENSMNEG00000037867	TRMT1	86	65.324	Macaca_nemestrina
ENSORLG00020007561	trmt1	89	65.149	ENSMLEG00000016142	TRMT1	87	65.149	Mandrillus_leucophaeus
ENSORLG00020007561	trmt1	100	80.000	ENSMAMG00000004357	trmt1	99	78.963	Mastacembelus_armatus
ENSORLG00020007561	trmt1	97	81.169	ENSMZEG00005014510	trmt1	95	81.171	Maylandia_zebra
ENSORLG00020007561	trmt1	89	64.572	ENSMAUG00000011134	Trmt1	87	64.747	Mesocricetus_auratus
ENSORLG00020007561	trmt1	89	66.318	ENSMICG00000000793	TRMT1	86	66.492	Microcebus_murinus
ENSORLG00020007561	trmt1	89	65.088	ENSMOCG00000015895	Trmt1	86	65.263	Microtus_ochrogaster
ENSORLG00020007561	trmt1	98	77.617	ENSMMOG00000011097	trmt1	100	79.545	Mola_mola
ENSORLG00020007561	trmt1	96	63.107	ENSMODG00000011619	TRMT1	98	63.533	Monodelphis_domestica
ENSORLG00020007561	trmt1	89	66.138	MGP_CAROLIEiJ_G0031304	Trmt1	86	66.314	Mus_caroli
ENSORLG00020007561	trmt1	89	66.314	ENSMUSG00000001909	Trmt1	86	66.490	Mus_musculus
ENSORLG00020007561	trmt1	89	66.138	MGP_SPRETEiJ_G0032422	Trmt1	86	66.314	Mus_spretus
ENSORLG00020007561	trmt1	89	65.849	ENSMPUG00000004210	TRMT1	82	66.025	Mustela_putorius_furo
ENSORLG00020007561	trmt1	90	66.146	ENSMLUG00000012809	TRMT1	86	66.319	Myotis_lucifugus
ENSORLG00020007561	trmt1	90	64.583	ENSNGAG00000022486	Trmt1	87	64.583	Nannospalax_galili
ENSORLG00020007561	trmt1	79	87.683	ENSNBRG00000024376	trmt1	87	89.412	Neolamprologus_brichardi
ENSORLG00020007561	trmt1	70	64.505	ENSNLEG00000013019	-	83	64.505	Nomascus_leucogenys
ENSORLG00020007561	trmt1	90	65.972	ENSMEUG00000013756	TRMT1	97	66.261	Notamacropus_eugenii
ENSORLG00020007561	trmt1	72	76.000	ENSOPRG00000009471	-	71	76.000	Ochotona_princeps
ENSORLG00020007561	trmt1	93	64.310	ENSODEG00000010323	TRMT1	89	64.478	Octodon_degus
ENSORLG00020007561	trmt1	97	84.416	ENSONIG00000000400	trmt1	97	84.615	Oreochromis_niloticus
ENSORLG00020007561	trmt1	81	63.925	ENSOCUG00000021934	TRMT1	99	64.060	Oryctolagus_cuniculus
ENSORLG00020007561	trmt1	100	94.554	ENSORLG00000020074	trmt1	100	94.554	Oryzias_latipes
ENSORLG00020007561	trmt1	100	99.083	ENSORLG00015006547	trmt1	100	99.083	Oryzias_latipes_hsok
ENSORLG00020007561	trmt1	100	92.508	ENSOMEG00000019343	trmt1	100	92.508	Oryzias_melastigma
ENSORLG00020007561	trmt1	89	65.096	ENSOGAG00000025576	TRMT1	90	65.794	Otolemur_garnettii
ENSORLG00020007561	trmt1	90	53.093	ENSOARG00000009397	TRMT1	81	53.184	Ovis_aries
ENSORLG00020007561	trmt1	89	52.768	ENSPPRG00000012117	TRMT1	87	57.895	Panthera_pardus
ENSORLG00020007561	trmt1	66	64.685	ENSPTIG00000008833	TRMT1	82	64.685	Panthera_tigris_altaica
ENSORLG00020007561	trmt1	88	47.979	ENSPTRG00000050421	-	90	47.979	Pan_troglodytes
ENSORLG00020007561	trmt1	89	66.025	ENSPTRG00000010557	TRMT1	87	66.025	Pan_troglodytes
ENSORLG00020007561	trmt1	72	53.696	ENSPANG00000034058	-	81	53.696	Papio_anubis
ENSORLG00020007561	trmt1	89	65.499	ENSPANG00000009247	TRMT1	87	65.499	Papio_anubis
ENSORLG00020007561	trmt1	94	74.874	ENSPKIG00000005309	trmt1	91	73.409	Paramormyrops_kingsleyae
ENSORLG00020007561	trmt1	86	58.258	ENSPSIG00000008762	TRMT1	79	58.258	Pelodiscus_sinensis
ENSORLG00020007561	trmt1	90	81.690	ENSPMGG00000019764	trmt1	94	79.534	Periophthalmus_magnuspinnatus
ENSORLG00020007561	trmt1	89	65.385	ENSPEMG00000016247	Trmt1	86	65.559	Peromyscus_maniculatus_bairdii
ENSORLG00020007561	trmt1	91	63.058	ENSPMAG00000004329	trmt1	91	63.167	Petromyzon_marinus
ENSORLG00020007561	trmt1	94	63.218	ENSPCIG00000019273	TRMT1	93	64.013	Phascolarctos_cinereus
ENSORLG00020007561	trmt1	96	82.314	ENSPFOG00000008527	trmt1	99	78.834	Poecilia_formosa
ENSORLG00020007561	trmt1	96	80.992	ENSPLAG00000018788	trmt1	99	78.894	Poecilia_latipinna
ENSORLG00020007561	trmt1	96	82.149	ENSPMEG00000013120	trmt1	97	80.573	Poecilia_mexicana
ENSORLG00020007561	trmt1	94	81.376	ENSPREG00000000211	trmt1	91	80.587	Poecilia_reticulata
ENSORLG00020007561	trmt1	89	65.674	ENSPPYG00000009622	TRMT1	87	65.674	Pongo_abelii
ENSORLG00020007561	trmt1	92	60.169	ENSPCAG00000003698	TRMT1	90	60.508	Procavia_capensis
ENSORLG00020007561	trmt1	89	65.734	ENSPCOG00000008653	TRMT1	87	65.909	Propithecus_coquereli
ENSORLG00020007561	trmt1	89	64.623	ENSPVAG00000015076	TRMT1	87	64.799	Pteropus_vampyrus
ENSORLG00020007561	trmt1	96	79.572	ENSPNYG00000013960	trmt1	99	80.528	Pundamilia_nyererei
ENSORLG00020007561	trmt1	99	65.506	ENSPNAG00000024859	trmt1	99	65.674	Pygocentrus_nattereri
ENSORLG00020007561	trmt1	89	65.669	ENSRNOG00000002914	Trmt1	89	65.845	Rattus_norvegicus
ENSORLG00020007561	trmt1	89	66.200	ENSRBIG00000038324	TRMT1	86	66.200	Rhinopithecus_bieti
ENSORLG00020007561	trmt1	86	48.463	ENSRBIG00000037505	-	87	49.186	Rhinopithecus_bieti
ENSORLG00020007561	trmt1	89	66.200	ENSRROG00000028599	TRMT1	86	66.200	Rhinopithecus_roxellana
ENSORLG00020007561	trmt1	86	48.101	ENSRROG00000031847	-	86	48.825	Rhinopithecus_roxellana
ENSORLG00020007561	trmt1	80	37.570	YDR120C	-	92	38.086	Saccharomyces_cerevisiae
ENSORLG00020007561	trmt1	89	63.573	ENSSBOG00000028861	TRMT1	92	63.573	Saimiri_boliviensis_boliviensis
ENSORLG00020007561	trmt1	90	66.551	ENSSHAG00000014381	TRMT1	97	65.124	Sarcophilus_harrisii
ENSORLG00020007561	trmt1	93	75.468	ENSSFOG00015004139	trmt1	89	74.338	Scleropages_formosus
ENSORLG00020007561	trmt1	98	79.872	ENSSMAG00000021136	trmt1	100	78.144	Scophthalmus_maximus
ENSORLG00020007561	trmt1	98	82.692	ENSSDUG00000012740	trmt1	99	81.212	Seriola_dumerili
ENSORLG00020007561	trmt1	98	82.853	ENSSLDG00000005971	trmt1	99	81.212	Seriola_lalandi_dorsalis
ENSORLG00020007561	trmt1	84	62.873	ENSSARG00000005138	TRMT1	94	63.060	Sorex_araneus
ENSORLG00020007561	trmt1	89	50.953	ENSSPUG00000001084	TRMT1	89	51.923	Sphenodon_punctatus
ENSORLG00020007561	trmt1	99	78.506	ENSSPAG00000007153	trmt1	99	83.108	Stegastes_partitus
ENSORLG00020007561	trmt1	92	63.176	ENSSSCG00000013744	TRMT1	93	63.345	Sus_scrofa
ENSORLG00020007561	trmt1	97	73.095	ENSTRUG00000010700	trmt1	95	73.095	Takifugu_rubripes
ENSORLG00020007561	trmt1	90	81.818	ENSTNIG00000018808	trmt1	99	82.837	Tetraodon_nigroviridis
ENSORLG00020007561	trmt1	90	61.847	ENSTTRG00000006379	TRMT1	87	62.021	Tursiops_truncatus
ENSORLG00020007561	trmt1	91	64.948	ENSUAMG00000022911	TRMT1	95	62.969	Ursus_americanus
ENSORLG00020007561	trmt1	91	64.777	ENSUMAG00000006027	TRMT1	91	64.948	Ursus_maritimus
ENSORLG00020007561	trmt1	91	64.777	ENSVVUG00000024177	TRMT1	88	64.948	Vulpes_vulpes
ENSORLG00020007561	trmt1	73	68.980	ENSXETG00000033863	TRMT1	92	69.783	Xenopus_tropicalis
ENSORLG00020007561	trmt1	96	82.810	ENSXCOG00000015733	trmt1	95	82.068	Xiphophorus_couchianus
ENSORLG00020007561	trmt1	91	84.495	ENSXMAG00000013823	trmt1	99	85.166	Xiphophorus_maculatus