EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020007735 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 18205 bases
Position: chr7:93954-112158
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025641	RRM_5	PF13893.6	2.4e-07	1	2
ENSORLP00020025641	RRM_5	PF13893.6	2.4e-07	2	2
ENSORLP00020025655	RRM_5	PF13893.6	2.5e-07	1	2
ENSORLP00020025655	RRM_5	PF13893.6	2.5e-07	2	2
ENSORLP00020025641	RRM_1	PF00076.22	2.2e-20	1	2
ENSORLP00020025641	RRM_1	PF00076.22	2.2e-20	2	2
ENSORLP00020025655	RRM_1	PF00076.22	2.2e-20	1	2
ENSORLP00020025655	RRM_1	PF00076.22	2.2e-20	2	2
ENSORLP00020006858	RRM_1	PF00076.22	9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020003935	-	9401	-	ENSORLP00020025641	2983 (aa)	-	-
ENSORLT00020003875	-	12034	-	ENSORLP00020006858	2929 (aa)	-	-
ENSORLT00020003892	-	11933	-	ENSORLP00020025655	3021 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020007735	-	89	82.249	ENSORLG00020009351	si:ch1073-335m2.2	79	82.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007735	-	85	76.650	ENSG00000065526	SPEN	71	75.743	Homo_sapiens
ENSORLG00020007735	-	66	82.840	ENSAPOG00000011411	si:ch1073-335m2.2	88	37.476	Acanthochromis_polyacanthus
ENSORLG00020007735	-	100	68.084	ENSAPOG00000009853	-	87	68.148	Acanthochromis_polyacanthus
ENSORLG00020007735	-	63	81.667	ENSAMEG00000011817	SPEN	82	81.667	Ailuropoda_melanoleuca
ENSORLG00020007735	-	100	67.955	ENSAOCG00000014505	-	87	68.052	Amphiprion_ocellaris
ENSORLG00020007735	-	100	68.019	ENSAPEG00000010288	-	87	68.116	Amphiprion_percula
ENSORLG00020007735	-	100	66.238	ENSATEG00000005627	-	87	66.367	Anabas_testudineus
ENSORLG00020007735	-	78	83.237	ENSACAG00000013761	SPEN	81	79.235	Anolis_carolinensis
ENSORLG00020007735	-	84	84.756	ENSANAG00000034428	SPEN	70	84.756	Aotus_nancymaae
ENSORLG00020007735	-	97	69.213	ENSACLG00000021433	si:ch1073-335m2.2	88	69.213	Astatotilapia_calliptera
ENSORLG00020007735	-	100	66.366	ENSACLG00000016922	-	89	66.688	Astatotilapia_calliptera
ENSORLG00020007735	-	100	47.000	ENSAMXG00000012485	spen	87	47.290	Astyanax_mexicanus
ENSORLG00020007735	-	99	77.665	ENSBTAG00000018729	SPEN	83	77.665	Bos_taurus
ENSORLG00020007735	-	84	84.756	ENSCJAG00000008527	SPEN	74	84.756	Callithrix_jacchus
ENSORLG00020007735	-	85	44.990	ENSCAFG00000016132	-	79	44.990	Canis_familiaris
ENSORLG00020007735	-	99	77.228	ENSCHIG00000025070	SPEN	83	77.228	Capra_hircus
ENSORLG00020007735	-	63	77.157	ENSTSYG00000036016	SPEN	90	77.157	Carlito_syrichta
ENSORLG00020007735	-	99	77.665	ENSCAPG00000013803	SPEN	87	77.665	Cavia_aperea
ENSORLG00020007735	-	85	77.157	ENSCCAG00000020258	SPEN	71	77.157	Cebus_capucinus
ENSORLG00020007735	-	85	77.157	ENSCATG00000015079	SPEN	78	77.157	Cercocebus_atys
ENSORLG00020007735	-	59	77.157	ENSCLAG00000002018	SPEN	73	77.157	Chinchilla_lanigera
ENSORLG00020007735	-	85	77.157	ENSCSAG00000000841	SPEN	82	77.157	Chlorocebus_sabaeus
ENSORLG00020007735	-	56	37.861	ENSCPBG00000010477	SPEN	89	40.703	Chrysemys_picta_bellii
ENSORLG00020007735	-	85	77.157	ENSCANG00000034547	SPEN	75	77.157	Colobus_angolensis_palliatus
ENSORLG00020007735	-	89	77.551	ENSCGRG00001007725	Spen	72	77.551	Cricetulus_griseus_chok1gshd
ENSORLG00020007735	-	89	77.551	ENSCGRG00000010581	Spen	73	77.551	Cricetulus_griseus_crigri
ENSORLG00020007735	-	100	62.303	ENSCSEG00000003915	-	87	63.278	Cynoglossus_semilaevis
ENSORLG00020007735	-	97	65.618	ENSCVAG00000009075	si:ch1073-335m2.2	87	36.798	Cyprinodon_variegatus
ENSORLG00020007735	-	100	64.937	ENSCVAG00000016346	-	87	64.937	Cyprinodon_variegatus
ENSORLG00020007735	-	100	45.469	ENSDARG00000074245	spen	87	45.509	Danio_rerio
ENSORLG00020007735	-	84	45.798	ENSDARG00000074332	si:ch1073-335m2.2	74	45.188	Danio_rerio
ENSORLG00020007735	-	72	77.665	ENSDNOG00000041948	SPEN	78	77.665	Dasypus_novemcinctus
ENSORLG00020007735	-	96	40.757	ENSDORG00000023909	Spen	89	38.300	Dipodomys_ordii
ENSORLG00020007735	-	99	77.157	ENSEASG00005015911	SPEN	86	77.157	Equus_asinus_asinus
ENSORLG00020007735	-	99	77.157	ENSECAG00000008833	SPEN	86	77.157	Equus_caballus
ENSORLG00020007735	-	95	44.882	ENSELUG00000007726	si:ch1073-335m2.2	81	45.276	Esox_lucius
ENSORLG00020007735	-	78	46.718	ENSFALG00000003551	SPEN	100	42.118	Ficedula_albicollis
ENSORLG00020007735	-	100	53.273	ENSGMOG00000008397	-	88	53.079	Gadus_morhua
ENSORLG00020007735	-	100	37.686	ENSGMOG00000008156	si:ch1073-335m2.2	85	66.079	Gadus_morhua
ENSORLG00020007735	-	56	38.664	ENSGALG00000036932	SPEN	88	41.375	Gallus_gallus
ENSORLG00020007735	-	97	66.441	ENSGAFG00000021570	si:ch1073-335m2.2	87	37.146	Gambusia_affinis
ENSORLG00020007735	-	100	65.517	ENSGAFG00000015819	-	87	65.517	Gambusia_affinis
ENSORLG00020007735	-	100	62.601	ENSGACG00000005341	-	88	62.762	Gasterosteus_aculeatus
ENSORLG00020007735	-	100	41.486	ENSGAGG00000020785	SPEN	90	41.274	Gopherus_agassizii
ENSORLG00020007735	-	85	76.650	ENSGGOG00000012041	SPEN	71	76.650	Gorilla_gorilla
ENSORLG00020007735	-	97	68.989	ENSHBUG00000023253	si:ch1073-335m2.2	85	68.989	Haplochromis_burtoni
ENSORLG00020007735	-	100	66.677	ENSHBUG00000020626	-	87	66.838	Haplochromis_burtoni
ENSORLG00020007735	-	90	77.157	ENSHGLG00000019259	SPEN	77	77.157	Heterocephalus_glaber_female
ENSORLG00020007735	-	61	77.157	ENSHGLG00100019294	SPEN	60	77.157	Heterocephalus_glaber_male
ENSORLG00020007735	-	100	45.167	ENSIPUG00000021668	spen	87	45.403	Ictalurus_punctatus
ENSORLG00020007735	-	100	39.236	ENSIPUG00000018212	si:ch1073-335m2.2	89	41.195	Ictalurus_punctatus
ENSORLG00020007735	-	87	77.157	ENSSTOG00000021428	SPEN	74	77.157	Ictidomys_tridecemlineatus
ENSORLG00020007735	-	88	77.157	ENSJJAG00000010882	Spen	87	77.157	Jaculus_jaculus
ENSORLG00020007735	-	68	69.154	ENSKMAG00000021725	si:ch1073-335m2.2	59	66.897	Kryptolebias_marmoratus
ENSORLG00020007735	-	100	65.799	ENSKMAG00000003882	-	87	65.992	Kryptolebias_marmoratus
ENSORLG00020007735	-	99	62.617	ENSLBEG00000019129	-	100	62.650	Labrus_bergylta
ENSORLG00020007735	-	99	83.721	ENSLACG00000003258	SPEN	86	83.721	Latimeria_chalumnae
ENSORLG00020007735	-	100	46.845	ENSLOCG00000007896	si:ch1073-335m2.2	89	47.751	Lepisosteus_oculatus
ENSORLG00020007735	-	99	77.157	ENSLAFG00000004524	SPEN	73	77.157	Loxodonta_africana
ENSORLG00020007735	-	85	77.157	ENSMFAG00000041974	SPEN	76	77.157	Macaca_fascicularis
ENSORLG00020007735	-	85	77.157	ENSMMUG00000008026	SPEN	76	77.157	Macaca_mulatta
ENSORLG00020007735	-	85	77.157	ENSMNEG00000042402	SPEN	76	77.157	Macaca_nemestrina
ENSORLG00020007735	-	85	77.157	ENSMLEG00000039293	SPEN	76	77.157	Mandrillus_leucophaeus
ENSORLG00020007735	-	100	37.074	ENSMAMG00000023870	si:ch1073-335m2.2	88	37.260	Mastacembelus_armatus
ENSORLG00020007735	-	100	66.549	ENSMZEG00005021491	-	97	66.645	Maylandia_zebra
ENSORLG00020007735	-	97	69.213	ENSMZEG00005011762	si:ch1073-335m2.2	85	69.213	Maylandia_zebra
ENSORLG00020007735	-	68	77.228	ENSMAUG00000008318	Spen	77	77.228	Mesocricetus_auratus
ENSORLG00020007735	-	90	77.665	ENSMICG00000030994	SPEN	76	77.665	Microcebus_murinus
ENSORLG00020007735	-	64	80.769	ENSMOCG00000016083	Spen	51	80.769	Microtus_ochrogaster
ENSORLG00020007735	-	98	77.049	ENSMODG00000003411	SPEN	64	77.049	Monodelphis_domestica
ENSORLG00020007735	-	100	65.939	ENSMALG00000008625	-	87	65.939	Monopterus_albus
ENSORLG00020007735	-	62	77.665	MGP_CAROLIEiJ_G0026745	Spen	66	77.665	Mus_caroli
ENSORLG00020007735	-	63	77.157	ENSMUSG00000040761	Spen	66	77.157	Mus_musculus
ENSORLG00020007735	-	64	78.173	MGP_PahariEiJ_G0029076	Spen	56	78.173	Mus_pahari
ENSORLG00020007735	-	76	77.157	MGP_SPRETEiJ_G0027724	Spen	66	77.157	Mus_spretus
ENSORLG00020007735	-	96	83.908	ENSMPUG00000016317	SPEN	81	83.908	Mustela_putorius_furo
ENSORLG00020007735	-	93	89.247	ENSMLUG00000010144	SPEN	60	89.247	Myotis_lucifugus
ENSORLG00020007735	-	95	77.665	ENSNGAG00000000641	Spen	85	77.665	Nannospalax_galili
ENSORLG00020007735	-	89	68.989	ENSNBRG00000005733	si:ch1073-335m2.2	85	68.989	Neolamprologus_brichardi
ENSORLG00020007735	-	100	65.660	ENSNBRG00000022090	-	100	65.826	Neolamprologus_brichardi
ENSORLG00020007735	-	85	76.650	ENSNLEG00000007652	SPEN	70	76.650	Nomascus_leucogenys
ENSORLG00020007735	-	75	83.333	ENSMEUG00000002422	SPEN	78	83.333	Notamacropus_eugenii
ENSORLG00020007735	-	59	78.173	ENSOPRG00000015800	SPEN	69	61.322	Ochotona_princeps
ENSORLG00020007735	-	92	76.650	ENSODEG00000016644	SPEN	79	76.650	Octodon_degus
ENSORLG00020007735	-	100	65.799	ENSONIG00000006573	-	88	66.024	Oreochromis_niloticus
ENSORLG00020007735	-	74	77.665	ENSOCUG00000010840	SPEN	64	77.665	Oryctolagus_cuniculus
ENSORLG00020007735	-	89	82.249	ENSORLG00000018414	si:ch1073-335m2.2	79	82.249	Oryzias_latipes
ENSORLG00020007735	-	100	97.135	ENSORLG00000028894	-	100	97.135	Oryzias_latipes
ENSORLG00020007735	-	100	97.848	ENSORLG00015022085	-	87	97.848	Oryzias_latipes_hsok
ENSORLG00020007735	-	80	82.840	ENSORLG00015005537	si:ch1073-335m2.2	70	82.840	Oryzias_latipes_hsok
ENSORLG00020007735	-	96	82.249	ENSOMEG00000004509	si:ch1073-335m2.2	86	82.249	Oryzias_melastigma
ENSORLG00020007735	-	100	81.884	ENSOMEG00000007639	-	87	81.884	Oryzias_melastigma
ENSORLG00020007735	-	96	81.319	ENSOGAG00000025110	SPEN	83	78.173	Otolemur_garnettii
ENSORLG00020007735	-	99	77.228	ENSOARG00000008477	SPEN	83	77.228	Ovis_aries
ENSORLG00020007735	-	85	76.650	ENSPPAG00000035690	SPEN	72	76.650	Pan_paniscus
ENSORLG00020007735	-	85	76.650	ENSPTRG00000000210	SPEN	71	76.650	Pan_troglodytes
ENSORLG00020007735	-	85	77.157	ENSPANG00000006293	SPEN	76	77.157	Papio_anubis
ENSORLG00020007735	-	100	46.566	ENSPKIG00000002617	SPEN	87	46.623	Paramormyrops_kingsleyae
ENSORLG00020007735	-	100	50.297	ENSPKIG00000010492	si:ch1073-335m2.2	90	50.453	Paramormyrops_kingsleyae
ENSORLG00020007735	-	68	77.665	ENSPEMG00000022997	Spen	76	41.065	Peromyscus_maniculatus_bairdii
ENSORLG00020007735	-	93	45.408	ENSPFOG00000017986	si:ch1073-335m2.2	73	34.106	Poecilia_formosa
ENSORLG00020007735	-	97	65.843	ENSPLAG00000016625	si:ch1073-335m2.2	87	38.457	Poecilia_latipinna
ENSORLG00020007735	-	100	65.688	ENSPMEG00000006764	-	87	65.688	Poecilia_mexicana
ENSORLG00020007735	-	93	45.238	ENSPMEG00000002674	si:ch1073-335m2.2	90	37.516	Poecilia_mexicana
ENSORLG00020007735	-	100	65.527	ENSPREG00000010399	-	87	65.527	Poecilia_reticulata
ENSORLG00020007735	-	85	76.650	ENSPPYG00000001834	SPEN	71	76.650	Pongo_abelii
ENSORLG00020007735	-	90	78.173	ENSPCAG00000009543	SPEN	78	78.173	Procavia_capensis
ENSORLG00020007735	-	99	75.253	ENSPCOG00000021735	SPEN	73	75.253	Propithecus_coquereli
ENSORLG00020007735	-	65	76.650	ENSPVAG00000013794	SPEN	53	72.770	Pteropus_vampyrus
ENSORLG00020007735	-	100	66.613	ENSPNYG00000012379	-	87	66.774	Pundamilia_nyererei
ENSORLG00020007735	-	97	69.213	ENSPNYG00000009042	si:ch1073-335m2.2	85	69.213	Pundamilia_nyererei
ENSORLG00020007735	-	100	40.420	ENSPNAG00000011452	si:ch1073-335m2.2	72	36.096	Pygocentrus_nattereri
ENSORLG00020007735	-	100	48.434	ENSPNAG00000020795	spen	87	48.605	Pygocentrus_nattereri
ENSORLG00020007735	-	65	77.665	ENSRNOG00000033556	Spen	81	77.665	Rattus_norvegicus
ENSORLG00020007735	-	85	77.157	ENSRBIG00000039654	SPEN	76	77.157	Rhinopithecus_bieti
ENSORLG00020007735	-	85	77.157	ENSRROG00000035686	SPEN	76	77.157	Rhinopithecus_roxellana
ENSORLG00020007735	-	81	80.769	ENSSBOG00000028770	SPEN	69	80.769	Saimiri_boliviensis_boliviensis
ENSORLG00020007735	-	100	39.619	ENSSHAG00000004960	SPEN	89	39.863	Sarcophilus_harrisii
ENSORLG00020007735	-	99	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	100	50.078	Scleropages_formosus
ENSORLG00020007735	-	100	48.228	ENSSFOG00015010267	si:ch1073-335m2.2	87	48.605	Scleropages_formosus
ENSORLG00020007735	-	100	66.184	ENSSMAG00000008996	-	87	66.184	Scophthalmus_maximus
ENSORLG00020007735	-	100	38.131	ENSSMAG00000000125	si:ch1073-335m2.2	88	37.113	Scophthalmus_maximus
ENSORLG00020007735	-	100	67.375	ENSSDUG00000003476	-	89	67.471	Seriola_dumerili
ENSORLG00020007735	-	90	68.315	ENSSDUG00000008416	si:ch1073-335m2.2	78	46.414	Seriola_dumerili
ENSORLG00020007735	-	100	67.170	ENSSLDG00000012950	-	87	67.363	Seriola_lalandi_dorsalis
ENSORLG00020007735	-	63	68.315	ENSSLDG00000023347	si:ch1073-335m2.2	74	46.963	Seriola_lalandi_dorsalis
ENSORLG00020007735	-	100	40.472	ENSSPUG00000001866	-	100	40.533	Sphenodon_punctatus
ENSORLG00020007735	-	100	68.963	ENSSPAG00000006014	-	87	68.963	Stegastes_partitus
ENSORLG00020007735	-	85	38.570	ENSSSCG00000034484	SPEN	71	41.397	Sus_scrofa
ENSORLG00020007735	-	69	45.624	ENSTRUG00000021008	si:ch1073-335m2.2	73	36.260	Takifugu_rubripes
ENSORLG00020007735	-	100	61.022	ENSTRUG00000024350	-	87	61.343	Takifugu_rubripes
ENSORLG00020007735	-	85	33.295	ENSTNIG00000014666	si:ch1073-335m2.2	87	38.648	Tetraodon_nigroviridis
ENSORLG00020007735	-	96	84.389	ENSTNIG00000010907	-	88	84.389	Tetraodon_nigroviridis
ENSORLG00020007735	-	70	77.000	ENSTBEG00000003628	SPEN	54	77.000	Tupaia_belangeri
ENSORLG00020007735	-	69	77.665	ENSTTRG00000015704	SPEN	58	77.665	Tursiops_truncatus
ENSORLG00020007735	-	62	82.222	ENSUAMG00000009600	SPEN	81	82.222	Ursus_americanus
ENSORLG00020007735	-	62	82.222	ENSUMAG00000021641	SPEN	81	82.222	Ursus_maritimus
ENSORLG00020007735	-	96	81.667	ENSVVUG00000028951	SPEN	86	81.667	Vulpes_vulpes
ENSORLG00020007735	-	100	37.445	ENSXCOG00000004516	si:ch1073-335m2.2	87	39.988	Xiphophorus_couchianus
ENSORLG00020007735	-	100	65.236	ENSXMAG00000021384	-	87	65.236	Xiphophorus_maculatus