EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020007798 (Gene tree)
Gene ID: -
Gene Symbol: slbp
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5662 bases
Position: chr10:3744994-3750655
Accession: ZDB-GENE-030131-9686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025698	SLBP_RNA_bind	PF15247.6	9.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020003785	-	2535	-	ENSORLP00020025698	261 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007798's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007798	slbp	89	49.372	ENSG00000163950	SLBP	82	54.808	Homo_sapiens
ENSORLG00020007798	slbp	99	63.345	ENSAPOG00000004953	slbp	99	62.989	Acanthochromis_polyacanthus
ENSORLG00020007798	slbp	77	50.732	ENSAMEG00000016915	SLBP	89	55.072	Ailuropoda_melanoleuca
ENSORLG00020007798	slbp	88	69.136	ENSACIG00000022308	slbp	93	69.136	Amphilophus_citrinellus
ENSORLG00020007798	slbp	100	62.057	ENSAOCG00000024545	slbp	100	62.057	Amphiprion_ocellaris
ENSORLG00020007798	slbp	100	62.411	ENSAPEG00000017629	slbp	100	62.411	Amphiprion_percula
ENSORLG00020007798	slbp	98	62.590	ENSATEG00000016358	slbp	98	62.590	Anabas_testudineus
ENSORLG00020007798	slbp	78	48.544	ENSAPLG00000015989	-	90	51.707	Anas_platyrhynchos
ENSORLG00020007798	slbp	89	47.561	ENSANAG00000034769	SLBP	83	54.762	Aotus_nancymaae
ENSORLG00020007798	slbp	90	63.424	ENSACLG00000007036	-	92	63.424	Astatotilapia_calliptera
ENSORLG00020007798	slbp	94	54.753	ENSAMXG00000014527	slbp	96	54.753	Astyanax_mexicanus
ENSORLG00020007798	slbp	73	54.040	ENSBTAG00000001328	SLBP	84	52.049	Bos_taurus
ENSORLG00020007798	slbp	90	49.388	ENSCJAG00000001790	SLBP	84	50.400	Callithrix_jacchus
ENSORLG00020007798	slbp	73	54.545	ENSCAFG00000015016	SLBP	71	57.921	Canis_familiaris
ENSORLG00020007798	slbp	73	54.545	ENSCAFG00020012334	SLBP	71	57.921	Canis_lupus_dingo
ENSORLG00020007798	slbp	76	53.365	ENSCHIG00000019364	SLBP	88	51.575	Capra_hircus
ENSORLG00020007798	slbp	79	51.456	ENSTSYG00000000376	SLBP	82	54.808	Carlito_syrichta
ENSORLG00020007798	slbp	63	48.795	ENSCAPG00000016340	SLBP	87	53.571	Cavia_aperea
ENSORLG00020007798	slbp	82	50.463	ENSCPOG00000000031	SLBP	82	52.500	Cavia_porcellus
ENSORLG00020007798	slbp	89	49.372	ENSCATG00000029173	SLBP	82	54.808	Cercocebus_atys
ENSORLG00020007798	slbp	89	48.729	ENSCLAG00000008157	SLBP	84	52.101	Chinchilla_lanigera
ENSORLG00020007798	slbp	89	37.815	ENSCSAG00000015628	SLBP	83	40.909	Chlorocebus_sabaeus
ENSORLG00020007798	slbp	88	47.934	ENSCPBG00000000746	SLBP	84	47.934	Chrysemys_picta_bellii
ENSORLG00020007798	slbp	77	51.485	ENSCANG00000041008	SLBP	89	54.369	Colobus_angolensis_palliatus
ENSORLG00020007798	slbp	75	53.431	ENSCGRG00001009760	-	84	51.029	Cricetulus_griseus_chok1gshd
ENSORLG00020007798	slbp	73	52.792	ENSCGRG00001012991	-	85	50.622	Cricetulus_griseus_chok1gshd
ENSORLG00020007798	slbp	75	53.431	ENSCGRG00000004506	Slbp	84	51.029	Cricetulus_griseus_crigri
ENSORLG00020007798	slbp	99	61.538	ENSCSEG00000020337	-	99	61.538	Cynoglossus_semilaevis
ENSORLG00020007798	slbp	92	67.717	ENSCVAG00000019592	-	95	68.504	Cyprinodon_variegatus
ENSORLG00020007798	slbp	90	54.941	ENSDARG00000100558	slbp	83	55.336	Danio_rerio
ENSORLG00020007798	slbp	73	51.942	ENSDNOG00000047539	SLBP	73	55.238	Dasypus_novemcinctus
ENSORLG00020007798	slbp	62	55.556	ENSDORG00000003028	Slbp	90	62.745	Dipodomys_ordii
ENSORLG00020007798	slbp	78	51.389	ENSETEG00000004641	SLBP	88	53.812	Echinops_telfairi
ENSORLG00020007798	slbp	51	57.778	ENSEASG00005022714	SLBP	90	52.198	Equus_asinus_asinus
ENSORLG00020007798	slbp	68	56.757	ENSECAG00000011689	SLBP	59	60.317	Equus_caballus
ENSORLG00020007798	slbp	100	52.297	ENSELUG00000012854	slbp	100	54.770	Esox_lucius
ENSORLG00020007798	slbp	65	57.647	ENSFCAG00000000169	SLBP	83	54.762	Felis_catus
ENSORLG00020007798	slbp	89	47.951	ENSFALG00000010003	-	86	47.951	Ficedula_albicollis
ENSORLG00020007798	slbp	66	56.322	ENSFDAG00000007592	SLBP	90	51.852	Fukomys_damarensis
ENSORLG00020007798	slbp	95	67.578	ENSFHEG00000007497	slbp	97	67.188	Fundulus_heteroclitus
ENSORLG00020007798	slbp	58	70.130	ENSGMOG00000015352	slbp	98	68.153	Gadus_morhua
ENSORLG00020007798	slbp	89	48.770	ENSGALG00000015712	SLBP	86	48.770	Gallus_gallus
ENSORLG00020007798	slbp	96	65.779	ENSGAFG00000019577	slbp	100	66.406	Gambusia_affinis
ENSORLG00020007798	slbp	90	60.569	ENSGACG00000019596	slbp	92	60.569	Gasterosteus_aculeatus
ENSORLG00020007798	slbp	73	53.695	ENSGAGG00000012096	SLBP	81	54.680	Gopherus_agassizii
ENSORLG00020007798	slbp	89	49.372	ENSGGOG00000003167	SLBP	82	54.808	Gorilla_gorilla
ENSORLG00020007798	slbp	90	63.813	ENSHBUG00000003338	-	92	63.813	Haplochromis_burtoni
ENSORLG00020007798	slbp	62	54.167	ENSHGLG00000010461	-	76	46.919	Heterocephalus_glaber_female
ENSORLG00020007798	slbp	62	51.786	ENSHGLG00000008313	-	86	44.118	Heterocephalus_glaber_female
ENSORLG00020007798	slbp	66	56.977	ENSHGLG00100014018	-	90	60.000	Heterocephalus_glaber_male
ENSORLG00020007798	slbp	62	52.976	ENSHGLG00100010510	-	86	44.958	Heterocephalus_glaber_male
ENSORLG00020007798	slbp	79	47.393	ENSHGLG00100014906	-	76	47.393	Heterocephalus_glaber_male
ENSORLG00020007798	slbp	100	60.662	ENSHCOG00000013425	slbp	100	60.662	Hippocampus_comes
ENSORLG00020007798	slbp	79	60.185	ENSIPUG00000016780	slbp	81	59.908	Ictalurus_punctatus
ENSORLG00020007798	slbp	66	55.491	ENSSTOG00000003262	SLBP	88	50.195	Ictidomys_tridecemlineatus
ENSORLG00020007798	slbp	89	49.372	ENSJJAG00000020549	-	84	52.263	Jaculus_jaculus
ENSORLG00020007798	slbp	81	53.182	ENSJJAG00000002394	-	90	51.136	Jaculus_jaculus
ENSORLG00020007798	slbp	99	64.748	ENSKMAG00000008187	slbp	99	64.748	Kryptolebias_marmoratus
ENSORLG00020007798	slbp	98	64.338	ENSLBEG00000024709	slbp	99	64.338	Labrus_bergylta
ENSORLG00020007798	slbp	92	47.471	ENSLACG00000014623	SLBP	90	47.471	Latimeria_chalumnae
ENSORLG00020007798	slbp	90	55.426	ENSLOCG00000011027	slbp	86	55.426	Lepisosteus_oculatus
ENSORLG00020007798	slbp	72	55.440	ENSLAFG00000012933	SLBP	82	57.789	Loxodonta_africana
ENSORLG00020007798	slbp	88	49.367	ENSMFAG00000030130	SLBP	71	54.237	Macaca_fascicularis
ENSORLG00020007798	slbp	89	47.967	ENSMMUG00000032303	SLBP	86	54.545	Macaca_mulatta
ENSORLG00020007798	slbp	52	46.309	ENSMNEG00000008082	SLBP	64	50.980	Macaca_nemestrina
ENSORLG00020007798	slbp	78	51.220	ENSMLEG00000024639	SLBP	84	51.092	Mandrillus_leucophaeus
ENSORLG00020007798	slbp	92	61.303	ENSMAMG00000001046	-	93	61.303	Mastacembelus_armatus
ENSORLG00020007798	slbp	90	63.813	ENSMZEG00005017261	-	92	63.813	Maylandia_zebra
ENSORLG00020007798	slbp	78	51.232	ENSMGAG00000013085	SLBP	90	51.232	Meleagris_gallopavo
ENSORLG00020007798	slbp	77	50.962	ENSMAUG00000009490	Slbp	84	50.617	Mesocricetus_auratus
ENSORLG00020007798	slbp	79	50.971	ENSMICG00000014244	SLBP	82	54.327	Microcebus_murinus
ENSORLG00020007798	slbp	73	53.535	ENSMOCG00000015826	Slbp	85	59.259	Microtus_ochrogaster
ENSORLG00020007798	slbp	92	60.729	ENSMMOG00000010181	slbp	96	60.729	Mola_mola
ENSORLG00020007798	slbp	90	46.825	ENSMODG00000004304	SLBP	91	50.988	Monodelphis_domestica
ENSORLG00020007798	slbp	99	59.075	ENSMALG00000013883	-	73	59.075	Monopterus_albus
ENSORLG00020007798	slbp	89	48.333	MGP_CAROLIEiJ_G0027117	Slbp	82	59.259	Mus_caroli
ENSORLG00020007798	slbp	89	48.319	ENSMUSG00000004642	Slbp	83	59.259	Mus_musculus
ENSORLG00020007798	slbp	89	48.319	MGP_PahariEiJ_G0016901	Slbp	82	59.259	Mus_pahari
ENSORLG00020007798	slbp	89	48.319	MGP_SPRETEiJ_G0028113	Slbp	83	59.259	Mus_spretus
ENSORLG00020007798	slbp	64	52.096	ENSMPUG00000011139	SLBP	83	56.140	Mustela_putorius_furo
ENSORLG00020007798	slbp	62	60.976	ENSMLUG00000004425	SLBP	84	55.072	Myotis_lucifugus
ENSORLG00020007798	slbp	73	53.535	ENSNGAG00000020799	Slbp	83	51.240	Nannospalax_galili
ENSORLG00020007798	slbp	78	66.216	ENSNBRG00000006044	-	84	66.216	Neolamprologus_brichardi
ENSORLG00020007798	slbp	89	47.967	ENSNLEG00000000048	SLBP	82	54.808	Nomascus_leucogenys
ENSORLG00020007798	slbp	64	56.287	ENSMEUG00000002501	SLBP	91	59.884	Notamacropus_eugenii
ENSORLG00020007798	slbp	62	57.927	ENSODEG00000012641	SLBP	86	51.883	Octodon_degus
ENSORLG00020007798	slbp	96	63.139	ENSONIG00000017469	-	97	63.139	Oreochromis_niloticus
ENSORLG00020007798	slbp	78	53.922	ENSOANG00000014243	SLBP	85	53.922	Ornithorhynchus_anatinus
ENSORLG00020007798	slbp	100	95.522	ENSORLG00000024887	-	100	95.522	Oryzias_latipes
ENSORLG00020007798	slbp	100	97.328	ENSORLG00015016656	slbp	100	97.328	Oryzias_latipes_hsok
ENSORLG00020007798	slbp	99	92.692	ENSOMEG00000010818	slbp	99	92.692	Oryzias_melastigma
ENSORLG00020007798	slbp	82	50.000	ENSOGAG00000009750	SLBP	83	51.852	Otolemur_garnettii
ENSORLG00020007798	slbp	62	57.669	ENSOARG00000016090	SLBP	90	54.545	Ovis_aries
ENSORLG00020007798	slbp	89	49.372	ENSPPAG00000033300	SLBP	82	54.808	Pan_paniscus
ENSORLG00020007798	slbp	65	57.647	ENSPPRG00000016897	SLBP	92	52.479	Panthera_pardus
ENSORLG00020007798	slbp	51	58.519	ENSPTIG00000015057	SLBP	89	54.144	Panthera_tigris_altaica
ENSORLG00020007798	slbp	90	49.794	ENSPTRG00000015832	SLBP	82	54.808	Pan_troglodytes
ENSORLG00020007798	slbp	89	47.347	ENSPANG00000004932	SLBP	82	54.808	Papio_anubis
ENSORLG00020007798	slbp	89	56.000	ENSPKIG00000006183	slbp	94	54.579	Paramormyrops_kingsleyae
ENSORLG00020007798	slbp	87	60.515	ENSPMGG00000017684	-	99	64.322	Periophthalmus_magnuspinnatus
ENSORLG00020007798	slbp	73	53.535	ENSPEMG00000018369	Slbp	84	51.029	Peromyscus_maniculatus_bairdii
ENSORLG00020007798	slbp	73	51.174	ENSPCIG00000013575	SLBP	72	49.615	Phascolarctos_cinereus
ENSORLG00020007798	slbp	96	65.399	ENSPFOG00000000462	slbp	98	64.906	Poecilia_formosa
ENSORLG00020007798	slbp	96	65.530	ENSPLAG00000008300	slbp	98	65.038	Poecilia_latipinna
ENSORLG00020007798	slbp	96	65.399	ENSPMEG00000020807	slbp	98	64.906	Poecilia_mexicana
ENSORLG00020007798	slbp	96	65.779	ENSPREG00000004561	slbp	98	65.283	Poecilia_reticulata
ENSORLG00020007798	slbp	89	49.372	ENSPPYG00000014529	SLBP	83	52.263	Pongo_abelii
ENSORLG00020007798	slbp	97	46.457	ENSPCOG00000017399	SLBP	82	54.808	Propithecus_coquereli
ENSORLG00020007798	slbp	97	48.425	ENSPVAG00000002807	SLBP	90	50.579	Pteropus_vampyrus
ENSORLG00020007798	slbp	90	63.813	ENSPNYG00000005451	-	92	63.813	Pundamilia_nyererei
ENSORLG00020007798	slbp	90	55.336	ENSPNAG00000018503	slbp	92	55.336	Pygocentrus_nattereri
ENSORLG00020007798	slbp	89	48.319	ENSRNOG00000037162	Slbp	83	51.240	Rattus_norvegicus
ENSORLG00020007798	slbp	89	49.372	ENSRBIG00000039159	SLBP	82	54.808	Rhinopithecus_bieti
ENSORLG00020007798	slbp	90	49.174	ENSRROG00000030081	SLBP	85	52.263	Rhinopithecus_roxellana
ENSORLG00020007798	slbp	67	50.282	ENSSBOG00000033897	SLBP	89	53.591	Saimiri_boliviensis_boliviensis
ENSORLG00020007798	slbp	73	51.174	ENSSHAG00000013939	SLBP	83	49.615	Sarcophilus_harrisii
ENSORLG00020007798	slbp	97	53.875	ENSSFOG00015019429	slbp	98	53.875	Scleropages_formosus
ENSORLG00020007798	slbp	100	59.717	ENSSMAG00000016028	-	100	59.717	Scophthalmus_maximus
ENSORLG00020007798	slbp	96	64.552	ENSSDUG00000000855	-	98	64.074	Seriola_dumerili
ENSORLG00020007798	slbp	52	69.863	ENSSLDG00000022893	-	87	69.863	Seriola_lalandi_dorsalis
ENSORLG00020007798	slbp	90	50.000	ENSSLDG00000007554	-	77	50.000	Seriola_lalandi_dorsalis
ENSORLG00020007798	slbp	89	49.580	ENSSPUG00000016007	SLBP	87	53.306	Sphenodon_punctatus
ENSORLG00020007798	slbp	98	64.493	ENSSPAG00000004021	slbp	94	68.880	Stegastes_partitus
ENSORLG00020007798	slbp	73	54.545	ENSSSCG00000008676	SLBP	71	57.921	Sus_scrofa
ENSORLG00020007798	slbp	89	49.794	ENSTGUG00000010626	-	90	49.794	Taeniopygia_guttata
ENSORLG00020007798	slbp	98	65.185	ENSTRUG00000000688	slbp	98	65.185	Takifugu_rubripes
ENSORLG00020007798	slbp	88	65.678	ENSTNIG00000000484	-	96	64.831	Tetraodon_nigroviridis
ENSORLG00020007798	slbp	61	59.146	ENSTTRG00000004010	-	89	57.831	Tursiops_truncatus
ENSORLG00020007798	slbp	61	59.375	ENSTTRG00000010901	-	91	55.024	Tursiops_truncatus
ENSORLG00020007798	slbp	75	54.680	ENSUAMG00000012990	SLBP	82	52.282	Ursus_americanus
ENSORLG00020007798	slbp	50	59.091	ENSUMAG00000006119	SLBP	88	53.933	Ursus_maritimus
ENSORLG00020007798	slbp	73	54.545	ENSVVUG00000015578	-	71	57.921	Vulpes_vulpes
ENSORLG00020007798	slbp	91	49.004	ENSXETG00000003876	slbp	89	48.810	Xenopus_tropicalis
ENSORLG00020007798	slbp	87	69.492	ENSXCOG00000008275	slbp	91	69.492	Xiphophorus_couchianus
ENSORLG00020007798	slbp	97	64.906	ENSXMAG00000001331	-	97	64.906	Xiphophorus_maculatus