EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020007820 (Gene tree)
Gene ID: -
Gene Symbol: xrcc6
Alias: -
Full Name: X-ray repair complementing defective repair in Chinese hamster cells 6
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5807 bases
Position: chr19:1653296-1659102
Accession: ZDB-GENE-030131-6420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020006889	SAP	PF02037.27	5.6e-08	1	1
ENSORLP00020006916	SAP	PF02037.27	5.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020003816	-	2766	-	ENSORLP00020006889	587 (aa)	-	-
ENSORLT00020003778	-	2838	-	ENSORLP00020006916	611 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007820's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007820	xrcc6	99	55.574	ENSG00000196419	XRCC6	99	55.574	Homo_sapiens
ENSORLG00020007820	xrcc6	99	84.426	ENSAPOG00000012704	xrcc6	100	84.426	Acanthochromis_polyacanthus
ENSORLG00020007820	xrcc6	100	84.779	ENSACIG00000021277	xrcc6	100	84.779	Amphilophus_citrinellus
ENSORLG00020007820	xrcc6	100	84.943	ENSAOCG00000021344	xrcc6	100	84.943	Amphiprion_ocellaris
ENSORLG00020007820	xrcc6	100	84.943	ENSAPEG00000020712	xrcc6	100	84.943	Amphiprion_percula
ENSORLG00020007820	xrcc6	100	83.797	ENSATEG00000007119	xrcc6	100	83.797	Anabas_testudineus
ENSORLG00020007820	xrcc6	89	60.512	ENSAPLG00000004469	XRCC6	98	60.512	Anas_platyrhynchos
ENSORLG00020007820	xrcc6	99	48.450	ENSANAG00000035230	-	99	48.287	Aotus_nancymaae
ENSORLG00020007820	xrcc6	99	46.417	ENSANAG00000023445	-	99	46.254	Aotus_nancymaae
ENSORLG00020007820	xrcc6	99	55.410	ENSANAG00000018684	XRCC6	99	55.246	Aotus_nancymaae
ENSORLG00020007820	xrcc6	99	48.361	ENSANAG00000020017	-	99	48.361	Aotus_nancymaae
ENSORLG00020007820	xrcc6	100	84.943	ENSACLG00000018608	xrcc6	100	84.943	Astatotilapia_calliptera
ENSORLG00020007820	xrcc6	99	77.011	ENSAMXG00000007545	xrcc6	99	77.011	Astyanax_mexicanus
ENSORLG00020007820	xrcc6	99	55.139	ENSCJAG00000045512	XRCC6	99	54.976	Callithrix_jacchus
ENSORLG00020007820	xrcc6	99	54.323	ENSTSYG00000011348	XRCC6	99	54.486	Carlito_syrichta
ENSORLG00020007820	xrcc6	99	52.039	ENSCCAG00000030041	-	95	51.713	Cebus_capucinus
ENSORLG00020007820	xrcc6	99	45.890	ENSCCAG00000035711	-	99	45.890	Cebus_capucinus
ENSORLG00020007820	xrcc6	99	46.154	ENSCCAG00000037663	-	97	46.154	Cebus_capucinus
ENSORLG00020007820	xrcc6	93	53.681	ENSCCAG00000030468	-	99	53.543	Cebus_capucinus
ENSORLG00020007820	xrcc6	99	55.574	ENSCATG00000042366	XRCC6	99	55.302	Cercocebus_atys
ENSORLG00020007820	xrcc6	99	55.882	ENSCLAG00000016669	XRCC6	99	55.882	Chinchilla_lanigera
ENSORLG00020007820	xrcc6	99	55.574	ENSCSAG00000005784	XRCC6	99	55.302	Chlorocebus_sabaeus
ENSORLG00020007820	xrcc6	99	59.278	ENSCPBG00000020535	XRCC6	99	59.442	Chrysemys_picta_bellii
ENSORLG00020007820	xrcc6	98	35.275	ENSCING00000000633	-	95	35.395	Ciona_intestinalis
ENSORLG00020007820	xrcc6	99	55.574	ENSCANG00000031032	XRCC6	99	55.302	Colobus_angolensis_palliatus
ENSORLG00020007820	xrcc6	99	51.809	ENSCGRG00001019029	Xrcc6	99	51.809	Cricetulus_griseus_chok1gshd
ENSORLG00020007820	xrcc6	99	56.250	ENSCGRG00000001528	Xrcc6	99	56.250	Cricetulus_griseus_crigri
ENSORLG00020007820	xrcc6	100	79.214	ENSCSEG00000020434	xrcc6	100	79.214	Cynoglossus_semilaevis
ENSORLG00020007820	xrcc6	100	82.815	ENSCVAG00000002189	xrcc6	100	82.815	Cyprinodon_variegatus
ENSORLG00020007820	xrcc6	99	75.205	ENSDARG00000071551	xrcc6	99	75.534	Danio_rerio
ENSORLG00020007820	xrcc6	81	53.155	ENSETEG00000015333	-	77	53.155	Echinops_telfairi
ENSORLG00020007820	xrcc6	99	54.085	ENSEASG00005001514	XRCC6	99	54.739	Equus_asinus_asinus
ENSORLG00020007820	xrcc6	99	54.248	ENSECAG00000017563	XRCC6	99	54.417	Equus_caballus
ENSORLG00020007820	xrcc6	100	75.450	ENSELUG00000020301	xrcc6	100	75.450	Esox_lucius
ENSORLG00020007820	xrcc6	99	58.958	ENSFALG00000011908	XRCC6	96	59.121	Ficedula_albicollis
ENSORLG00020007820	xrcc6	100	84.779	ENSFHEG00000016833	xrcc6	100	84.779	Fundulus_heteroclitus
ENSORLG00020007820	xrcc6	99	68.455	ENSGMOG00000013524	xrcc6	100	68.455	Gadus_morhua
ENSORLG00020007820	xrcc6	99	58.795	ENSGALG00000011932	XRCC6	99	58.958	Gallus_gallus
ENSORLG00020007820	xrcc6	100	81.178	ENSGAFG00000008130	xrcc6	100	81.506	Gambusia_affinis
ENSORLG00020007820	xrcc6	99	82.573	ENSGACG00000004868	xrcc6	99	82.573	Gasterosteus_aculeatus
ENSORLG00020007820	xrcc6	99	58.949	ENSGAGG00000017518	XRCC6	99	59.113	Gopherus_agassizii
ENSORLG00020007820	xrcc6	99	55.574	ENSGGOG00000015885	XRCC6	99	55.302	Gorilla_gorilla
ENSORLG00020007820	xrcc6	93	85.009	ENSHBUG00000023281	xrcc6	100	85.009	Haplochromis_burtoni
ENSORLG00020007820	xrcc6	99	54.664	ENSHGLG00000018078	XRCC6	99	54.501	Heterocephalus_glaber_female
ENSORLG00020007820	xrcc6	99	54.664	ENSHGLG00100011264	XRCC6	99	54.501	Heterocephalus_glaber_male
ENSORLG00020007820	xrcc6	100	76.596	ENSHCOG00000009821	xrcc6	100	76.596	Hippocampus_comes
ENSORLG00020007820	xrcc6	99	76.683	ENSIPUG00000000767	xrcc6	99	76.683	Ictalurus_punctatus
ENSORLG00020007820	xrcc6	99	54.902	ENSSTOG00000009490	XRCC6	99	55.065	Ictidomys_tridecemlineatus
ENSORLG00020007820	xrcc6	99	51.809	ENSJJAG00000017136	Xrcc6	99	52.303	Jaculus_jaculus
ENSORLG00020007820	xrcc6	99	84.754	ENSKMAG00000002141	xrcc6	99	84.754	Kryptolebias_marmoratus
ENSORLG00020007820	xrcc6	99	82.430	ENSLBEG00000002691	xrcc6	99	82.430	Labrus_bergylta
ENSORLG00020007820	xrcc6	83	70.297	ENSLOCG00000011533	xrcc6	99	70.297	Lepisosteus_oculatus
ENSORLG00020007820	xrcc6	99	55.574	ENSMFAG00000003352	XRCC6	99	55.302	Macaca_fascicularis
ENSORLG00020007820	xrcc6	99	55.574	ENSMMUG00000001856	XRCC6	99	55.302	Macaca_mulatta
ENSORLG00020007820	xrcc6	99	55.574	ENSMNEG00000035076	XRCC6	99	55.302	Macaca_nemestrina
ENSORLG00020007820	xrcc6	99	55.574	ENSMLEG00000019869	XRCC6	99	55.302	Mandrillus_leucophaeus
ENSORLG00020007820	xrcc6	96	81.261	ENSMAMG00000003405	xrcc6	97	81.261	Mastacembelus_armatus
ENSORLG00020007820	xrcc6	100	81.342	ENSMAMG00000003368	xrcc6	100	81.342	Mastacembelus_armatus
ENSORLG00020007820	xrcc6	100	84.779	ENSMZEG00005028080	xrcc6	100	84.779	Maylandia_zebra
ENSORLG00020007820	xrcc6	99	58.632	ENSMGAG00000012146	XRCC6	99	58.632	Meleagris_gallopavo
ENSORLG00020007820	xrcc6	99	56.743	ENSMAUG00000017340	Xrcc6	99	56.743	Mesocricetus_auratus
ENSORLG00020007820	xrcc6	99	56.743	ENSMOCG00000015717	Xrcc6	99	56.743	Microtus_ochrogaster
ENSORLG00020007820	xrcc6	100	80.687	ENSMMOG00000003536	xrcc6	99	80.687	Mola_mola
ENSORLG00020007820	xrcc6	100	84.124	ENSMALG00000013912	xrcc6	95	84.124	Monopterus_albus
ENSORLG00020007820	xrcc6	99	53.519	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.519	Mus_caroli
ENSORLG00020007820	xrcc6	99	57.119	ENSMUSG00000022471	Xrcc6	99	57.576	Mus_musculus
ENSORLG00020007820	xrcc6	99	57.516	MGP_PahariEiJ_G0020069	Xrcc6	99	57.119	Mus_pahari
ENSORLG00020007820	xrcc6	96	57.607	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.607	Mus_spretus
ENSORLG00020007820	xrcc6	99	55.263	ENSNGAG00000013750	Xrcc6	99	55.263	Nannospalax_galili
ENSORLG00020007820	xrcc6	100	85.270	ENSNBRG00000004125	xrcc6	100	85.270	Neolamprologus_brichardi
ENSORLG00020007820	xrcc6	95	57.216	ENSOPRG00000002386	XRCC6	99	57.216	Ochotona_princeps
ENSORLG00020007820	xrcc6	99	54.739	ENSODEG00000015847	XRCC6	99	55.065	Octodon_degus
ENSORLG00020007820	xrcc6	100	84.779	ENSONIG00000019715	xrcc6	100	84.779	Oreochromis_niloticus
ENSORLG00020007820	xrcc6	70	60.194	ENSOANG00000011328	XRCC6	98	60.194	Ornithorhynchus_anatinus
ENSORLG00020007820	xrcc6	99	56.322	ENSOCUG00000006948	XRCC6	99	56.486	Oryctolagus_cuniculus
ENSORLG00020007820	xrcc6	100	98.854	ENSORLG00015006406	xrcc6	100	98.854	Oryzias_latipes_hsok
ENSORLG00020007820	xrcc6	100	94.108	ENSOMEG00000008998	xrcc6	100	94.108	Oryzias_melastigma
ENSORLG00020007820	xrcc6	99	55.392	ENSOGAG00000008821	XRCC6	99	55.556	Otolemur_garnettii
ENSORLG00020007820	xrcc6	92	55.014	ENSPPAG00000037167	XRCC6	99	55.014	Pan_paniscus
ENSORLG00020007820	xrcc6	99	55.574	ENSPTRG00000022548	XRCC6	99	56.261	Pan_troglodytes
ENSORLG00020007820	xrcc6	99	55.574	ENSPTRG00000045824	XRCC6	99	56.261	Pan_troglodytes
ENSORLG00020007820	xrcc6	99	55.410	ENSPANG00000001252	XRCC6	99	56.223	Papio_anubis
ENSORLG00020007820	xrcc6	99	72.906	ENSPKIG00000003974	xrcc6	99	72.906	Paramormyrops_kingsleyae
ENSORLG00020007820	xrcc6	99	78.607	ENSPMGG00000014220	xrcc6	100	78.773	Periophthalmus_magnuspinnatus
ENSORLG00020007820	xrcc6	99	55.757	ENSPEMG00000023446	Xrcc6	99	55.757	Peromyscus_maniculatus_bairdii
ENSORLG00020007820	xrcc6	99	57.566	ENSPCIG00000026409	XRCC6	99	57.566	Phascolarctos_cinereus
ENSORLG00020007820	xrcc6	100	84.124	ENSPFOG00000017173	xrcc6	100	84.124	Poecilia_formosa
ENSORLG00020007820	xrcc6	100	83.797	ENSPLAG00000000562	xrcc6	100	83.797	Poecilia_latipinna
ENSORLG00020007820	xrcc6	100	84.288	ENSPMEG00000018478	xrcc6	100	84.288	Poecilia_mexicana
ENSORLG00020007820	xrcc6	100	83.170	ENSPREG00000020957	xrcc6	93	83.170	Poecilia_reticulata
ENSORLG00020007820	xrcc6	99	50.082	ENSPPYG00000011876	XRCC6	99	50.082	Pongo_abelii
ENSORLG00020007820	xrcc6	99	54.337	ENSPVAG00000001168	XRCC6	99	54.337	Pteropus_vampyrus
ENSORLG00020007820	xrcc6	100	84.779	ENSPNYG00000003815	xrcc6	100	80.685	Pundamilia_nyererei
ENSORLG00020007820	xrcc6	99	56.465	ENSRNOG00000006392	Xrcc6	99	56.465	Rattus_norvegicus
ENSORLG00020007820	xrcc6	99	51.475	ENSRBIG00000039794	XRCC6	98	52.773	Rhinopithecus_bieti
ENSORLG00020007820	xrcc6	99	55.574	ENSRROG00000030297	XRCC6	99	55.302	Rhinopithecus_roxellana
ENSORLG00020007820	xrcc6	70	49.756	ENSSBOG00000024724	-	99	50.123	Saimiri_boliviensis_boliviensis
ENSORLG00020007820	xrcc6	99	56.607	ENSSHAG00000010790	XRCC6	99	56.607	Sarcophilus_harrisii
ENSORLG00020007820	xrcc6	99	74.548	ENSSFOG00015014409	xrcc6	99	74.548	Scleropages_formosus
ENSORLG00020007820	xrcc6	100	84.943	ENSSMAG00000006496	xrcc6	100	84.943	Scophthalmus_maximus
ENSORLG00020007820	xrcc6	100	83.797	ENSSDUG00000007542	xrcc6	100	83.797	Seriola_dumerili
ENSORLG00020007820	xrcc6	100	83.306	ENSSLDG00000009974	xrcc6	100	83.306	Seriola_lalandi_dorsalis
ENSORLG00020007820	xrcc6	99	58.891	ENSSPUG00000012086	XRCC6	99	59.054	Sphenodon_punctatus
ENSORLG00020007820	xrcc6	100	85.434	ENSSPAG00000015199	xrcc6	100	85.434	Stegastes_partitus
ENSORLG00020007820	xrcc6	96	60.239	ENSTGUG00000009852	-	95	60.239	Taeniopygia_guttata
ENSORLG00020007820	xrcc6	99	77.377	ENSTRUG00000017070	xrcc6	99	77.377	Takifugu_rubripes
ENSORLG00020007820	xrcc6	96	76.351	ENSTNIG00000012947	xrcc6	99	76.351	Tetraodon_nigroviridis
ENSORLG00020007820	xrcc6	96	51.453	ENSTBEG00000011736	XRCC6	99	51.453	Tupaia_belangeri
ENSORLG00020007820	xrcc6	99	46.895	ENSTTRG00000006749	XRCC6	99	47.876	Tursiops_truncatus
ENSORLG00020007820	xrcc6	100	83.142	ENSXMAG00000009691	xrcc6	100	83.142	Xiphophorus_maculatus