EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020008031 (Gene tree)
Gene ID
-
Gene Symbol
chd8
Alias
-
Full Name
chromodomain helicase DNA binding protein 8
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Minus strand
Length
18968 bases
Position
chr17:15226935-15245902
Accession
ZDB-GENE-030131-6320
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020007059ResIIIPF04851.153.7e-0611
ENSORLP00020007059BRKPF07533.161.7e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020003526-7503-ENSORLP000200070592500 (aa)--
ENSORLT00020003566-1362-ENSORLP00020007034453 (aa)--
Gene Model
Click here to download ENSORLG00020008031's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008031's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020008031chd86058.384ENSORLG00020021891chd69571.600
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020008031chd88261.528ENSG00000100888CHD88683.333Homo_sapiens
ENSORLG00020008031chd86065.357ENSAPOG00000009351chd76261.208Acanthochromis_polyacanthus
ENSORLG00020008031chd810085.601ENSAPOG00000015560chd810085.245Acanthochromis_polyacanthus
ENSORLG00020008031chd86164.718ENSAMEG00000005699CHD75363.380Ailuropoda_melanoleuca
ENSORLG00020008031chd89061.916ENSAMEG00000006307CHD88560.845Ailuropoda_melanoleuca
ENSORLG00020008031chd85566.995ENSACIG00000001590chd76366.616Amphilophus_citrinellus
ENSORLG00020008031chd810085.776ENSACIG00000006440chd810085.720Amphilophus_citrinellus
ENSORLG00020008031chd810086.593ENSAOCG00000016793chd810086.238Amphiprion_ocellaris
ENSORLG00020008031chd85668.272ENSAOCG00000002337chd76366.417Amphiprion_ocellaris
ENSORLG00020008031chd85665.665ENSATEG00000002590chd76265.941Anabas_testudineus
ENSORLG00020008031chd810083.757ENSATEG00000007108chd810081.189Anabas_testudineus
ENSORLG00020008031chd86263.989ENSAPLG00000005873CHD75263.655Anas_platyrhynchos
ENSORLG00020008031chd86164.599ENSANAG00000035300CHD75363.221Aotus_nancymaae
ENSORLG00020008031chd810082.796ENSACLG00000019692chd810082.719Astatotilapia_calliptera
ENSORLG00020008031chd86461.278ENSAMXG00000006180chd76361.851Astyanax_mexicanus
ENSORLG00020008031chd87767.429ENSBTAG00000020422CHD88467.244Bos_taurus
ENSORLG00020008031chd86164.739ENSCJAG00000009025CHD75363.356Callithrix_jacchus
ENSORLG00020008031chd89061.564ENSCJAG00000009002CHD88467.300Callithrix_jacchus
ENSORLG00020008031chd86164.509ENSCAFG00000007167CHD75363.003Canis_familiaris
ENSORLG00020008031chd88861.973ENSCAFG00020014565CHD89779.677Canis_lupus_dingo
ENSORLG00020008031chd86164.509ENSCAFG00020015856CHD75363.070Canis_lupus_dingo
ENSORLG00020008031chd86164.878ENSCHIG00000011729CHD75363.624Capra_hircus
ENSORLG00020008031chd89061.833ENSCHIG00000026157CHD88561.122Capra_hircus
ENSORLG00020008031chd86164.554ENSTSYG00000004018CHD75363.313Carlito_syrichta
ENSORLG00020008031chd86161.034ENSCAPG00000007952CHD75259.785Cavia_aperea
ENSORLG00020008031chd88458.958ENSCAPG00000016749CHD88158.130Cavia_aperea
ENSORLG00020008031chd88961.007ENSCPOG00000002538CHD88560.696Cavia_porcellus
ENSORLG00020008031chd86164.530ENSCPOG00000013385CHD75363.154Cavia_porcellus
ENSORLG00020008031chd86263.934ENSCCAG00000025831CHD75363.356Cebus_capucinus
ENSORLG00020008031chd86164.530ENSCLAG00000004679CHD75263.464Chinchilla_lanigera
ENSORLG00020008031chd88961.520ENSCLAG00000001966CHD88560.957Chinchilla_lanigera
ENSORLG00020008031chd88362.161ENSCHOG00000003782CHD87866.170Choloepus_hoffmanni
ENSORLG00020008031chd85170.050ENSCHOG00000008478CHD76268.246Choloepus_hoffmanni
ENSORLG00020008031chd86068.505ENSCPBG00000021517CHD77365.885Chrysemys_picta_bellii
ENSORLG00020008031chd85873.456ENSCPBG00000012687CHD88061.190Chrysemys_picta_bellii
ENSORLG00020008031chd86263.347ENSCGRG00001011949Chd75263.347Cricetulus_griseus_chok1gshd
ENSORLG00020008031chd89455.135ENSCGRG00000009710Chd88560.929Cricetulus_griseus_crigri
ENSORLG00020008031chd810080.645ENSCSEG00000021155chd810077.626Cynoglossus_semilaevis
ENSORLG00020008031chd85964.921ENSCSEG00000017886chd76660.966Cynoglossus_semilaevis
ENSORLG00020008031chd810069.134ENSDARG00000075543chd89375.661Danio_rerio
ENSORLG00020008031chd86264.793ENSDARG00000075211chd76361.614Danio_rerio
ENSORLG00020008031chd86264.237ENSDNOG00000011674CHD75263.954Dasypus_novemcinctus
ENSORLG00020008031chd89061.694ENSDNOG00000005838CHD88560.839Dasypus_novemcinctus
ENSORLG00020008031chd86263.438ENSDORG00000003515Chd75362.844Dipodomys_ordii
ENSORLG00020008031chd88260.009ENSDORG00000002050Chd87960.113Dipodomys_ordii
ENSORLG00020008031chd87286.891ENSETEG00000012353CHD88366.751Echinops_telfairi
ENSORLG00020008031chd87756.075ENSEBUG00000007607chd86864.068Eptatretus_burgeri
ENSORLG00020008031chd86263.959ENSEASG00005016258CHD75363.380Equus_asinus_asinus
ENSORLG00020008031chd89061.654ENSEASG00005010882CHD89260.962Equus_asinus_asinus
ENSORLG00020008031chd86263.959ENSECAG00000001445CHD75863.380Equus_caballus
ENSORLG00020008031chd89061.887ENSECAG00000016102CHD88561.350Equus_caballus
ENSORLG00020008031chd85898.438ENSEEUG00000003523CHD86498.438Erinaceus_europaeus
ENSORLG00020008031chd810071.802ENSELUG00000004302chd89775.407Esox_lucius
ENSORLG00020008031chd86160.935ENSELUG00000024442chd76259.257Esox_lucius
ENSORLG00020008031chd86263.779ENSFCAG00000003849CHD75263.779Felis_catus
ENSORLG00020008031chd86264.106ENSFALG00000005570CHD75263.661Ficedula_albicollis
ENSORLG00020008031chd86164.530ENSFDAG00000000528CHD75263.452Fukomys_damarensis
ENSORLG00020008031chd88961.231ENSFDAG00000011368CHD88560.716Fukomys_damarensis
ENSORLG00020008031chd85469.345ENSGMOG00000004232chd76269.345Gadus_morhua
ENSORLG00020008031chd88081.613ENSGMOG00000015075chd89281.484Gadus_morhua
ENSORLG00020008031chd86263.989ENSGALG00000041080CHD75263.655Gallus_gallus
ENSORLG00020008031chd86064.988ENSGAFG00000006858chd75464.812Gambusia_affinis
ENSORLG00020008031chd85764.719ENSGACG00000014897chd76663.371Gasterosteus_aculeatus
ENSORLG00020008031chd88479.109ENSGACG00000014096chd89979.853Gasterosteus_aculeatus
ENSORLG00020008031chd86967.972ENSGAGG00000017996CHD77865.734Gopherus_agassizii
ENSORLG00020008031chd88960.685ENSGAGG00000022951CHD88766.872Gopherus_agassizii
ENSORLG00020008031chd810085.720ENSHBUG00000002850chd810085.294Haplochromis_burtoni
ENSORLG00020008031chd88961.278ENSHGLG00000003559CHD88560.686Heterocephalus_glaber_female
ENSORLG00020008031chd86164.530ENSHGLG00000017268CHD75263.464Heterocephalus_glaber_female
ENSORLG00020008031chd88961.278ENSHGLG00100001031CHD88560.686Heterocephalus_glaber_male
ENSORLG00020008031chd86164.530ENSHGLG00100015649CHD75263.464Heterocephalus_glaber_male
ENSORLG00020008031chd86163.657ENSHCOG00000014380chd76562.151Hippocampus_comes
ENSORLG00020008031chd88575.480ENSHCOG00000016611chd89475.151Hippocampus_comes
ENSORLG00020008031chd810067.505ENSIPUG00000019891chd89771.193Ictalurus_punctatus
ENSORLG00020008031chd86258.294ENSIPUG00000007585chd76758.311Ictalurus_punctatus
ENSORLG00020008031chd88961.629ENSSTOG00000001854CHD88561.292Ictidomys_tridecemlineatus
ENSORLG00020008031chd86164.624ENSSTOG00000011949CHD75363.246Ictidomys_tridecemlineatus
ENSORLG00020008031chd86660.895ENSJJAG00000022064Chd75363.087Jaculus_jaculus
ENSORLG00020008031chd89561.918ENSLACG00000011367CHD89261.794Latimeria_chalumnae
ENSORLG00020008031chd86265.134ENSLACG00000002461CHD75164.997Latimeria_chalumnae
ENSORLG00020008031chd86264.271ENSLOCG00000005062chd75262.779Lepisosteus_oculatus
ENSORLG00020008031chd89061.437ENSLAFG00000009358CHD88661.009Loxodonta_africana
ENSORLG00020008031chd810084.984ENSMAMG00000016297chd810080.789Mastacembelus_armatus
ENSORLG00020008031chd810085.912ENSMZEG00005012027chd810085.720Maylandia_zebra
ENSORLG00020008031chd86263.921ENSMGAG00000011092CHD75263.441Meleagris_gallopavo
ENSORLG00020008031chd85766.667ENSMAUG00000001000Chd75066.518Mesocricetus_auratus
ENSORLG00020008031chd88970.241ENSMAUG00000015827Chd88570.022Mesocricetus_auratus
ENSORLG00020008031chd89061.585ENSMICG00000007735CHD88467.318Microcebus_murinus
ENSORLG00020008031chd88261.970ENSMOCG00000013700Chd88061.357Microtus_ochrogaster
ENSORLG00020008031chd86263.686ENSMOCG00000011408Chd75363.094Microtus_ochrogaster
ENSORLG00020008031chd810084.545ENSMMOG00000013335chd810083.794Mola_mola
ENSORLG00020008031chd89061.622ENSMODG00000006219CHD89261.095Monodelphis_domestica
ENSORLG00020008031chd86164.644ENSMODG00000008488CHD75263.477Monodelphis_domestica
ENSORLG00020008031chd85667.848ENSMALG00000004389chd75967.986Monopterus_albus
ENSORLG00020008031chd810083.954ENSMALG00000011572chd810084.488Monopterus_albus
ENSORLG00020008031chd86263.581MGP_CAROLIEiJ_G0025797Chd75363.052Mus_caroli
ENSORLG00020008031chd88961.822MGP_CAROLIEiJ_G0019237Chd88366.964Mus_caroli
ENSORLG00020008031chd86263.741ENSMUSG00000041235Chd75363.186Mus_musculus
ENSORLG00020008031chd88961.774ENSMUSG00000053754Chd88660.983Mus_musculus
ENSORLG00020008031chd86263.821MGP_PahariEiJ_G0023920Chd75363.320Mus_pahari
ENSORLG00020008031chd88961.853MGP_PahariEiJ_G0030258Chd88367.263Mus_pahari
ENSORLG00020008031chd86263.717MGP_SPRETEiJ_G0026745Chd75363.186Mus_spretus
ENSORLG00020008031chd86064.903ENSMPUG00000002338CHD76263.380Mustela_putorius_furo
ENSORLG00020008031chd86163.202ENSMLUG00000015266CHD75362.032Myotis_lucifugus
ENSORLG00020008031chd89061.651ENSMLUG00000001878CHD88561.208Myotis_lucifugus
ENSORLG00020008031chd88961.957ENSNGAG00000022658Chd88561.837Nannospalax_galili
ENSORLG00020008031chd86263.959ENSNGAG00000010767Chd75363.380Nannospalax_galili
ENSORLG00020008031chd810085.096ENSNBRG00000017428chd810083.964Neolamprologus_brichardi
ENSORLG00020008031chd85864.198ENSNBRG00000001280chd76164.127Neolamprologus_brichardi
ENSORLG00020008031chd89061.390ENSNLEG00000014445CHD88466.834Nomascus_leucogenys
ENSORLG00020008031chd88361.322ENSMEUG00000011732CHD88460.657Notamacropus_eugenii
ENSORLG00020008031chd87769.664ENSOPRG00000016120CHD88669.966Ochotona_princeps
ENSORLG00020008031chd89061.289ENSODEG00000001047CHD89260.857Octodon_degus
ENSORLG00020008031chd86164.440ENSODEG00000002424CHD75263.385Octodon_degus
ENSORLG00020008031chd86063.705ENSONIG00000016614chd75163.268Oreochromis_niloticus
ENSORLG00020008031chd810081.999ENSONIG00000015569chd810082.589Oreochromis_niloticus
ENSORLG00020008031chd85764.694ENSOANG00000005042CHD76963.208Ornithorhynchus_anatinus
ENSORLG00020008031chd86164.554ENSOCUG00000010034CHD76563.246Oryctolagus_cuniculus
ENSORLG00020008031chd810095.465ENSORLG00000012103chd810095.465Oryzias_latipes
ENSORLG00020008031chd810090.027ENSOMEG00000012832chd810090.299Oryzias_melastigma
ENSORLG00020008031chd86164.714ENSOGAG00000013905CHD75363.465Otolemur_garnettii
ENSORLG00020008031chd89061.804ENSOARG00000019643CHD88561.093Ovis_aries
ENSORLG00020008031chd86263.823ENSPPRG00000022248CHD75363.246Panthera_pardus
ENSORLG00020008031chd86263.388ENSPTIG00000011702CHD75463.388Panthera_tigris_altaica
ENSORLG00020008031chd86263.970ENSPKIG00000009637chd75163.790Paramormyrops_kingsleyae
ENSORLG00020008031chd87582.087ENSPKIG00000009142chd810065.269Paramormyrops_kingsleyae
ENSORLG00020008031chd86164.972ENSPSIG00000012003CHD75263.685Pelodiscus_sinensis
ENSORLG00020008031chd86361.895ENSPMGG00000018543chd76861.761Periophthalmus_magnuspinnatus
ENSORLG00020008031chd86164.541ENSPEMG00000023028Chd75264.575Peromyscus_maniculatus_bairdii
ENSORLG00020008031chd88864.410ENSPCIG00000020931CHD89460.684Phascolarctos_cinereus
ENSORLG00020008031chd89983.716ENSPFOG00000016369chd810080.000Poecilia_formosa
ENSORLG00020008031chd85661.161ENSPFOG00000010939-6861.011Poecilia_formosa
ENSORLG00020008031chd86064.910ENSPFOG00000004891chd77862.182Poecilia_formosa
ENSORLG00020008031chd89985.528ENSPLAG00000018522chd810084.364Poecilia_latipinna
ENSORLG00020008031chd85665.250ENSPMEG00000005879chd76061.963Poecilia_mexicana
ENSORLG00020008031chd89986.099ENSPMEG00000006541chd810084.970Poecilia_mexicana
ENSORLG00020008031chd89982.634ENSPREG00000021867chd810080.753Poecilia_reticulata
ENSORLG00020008031chd89061.622ENSPPYG00000005596CHD88660.733Pongo_abelii
ENSORLG00020008031chd87776.596ENSPCAG00000007099CHD88276.359Procavia_capensis
ENSORLG00020008031chd86164.694ENSPCOG00000013850CHD75263.791Propithecus_coquereli
ENSORLG00020008031chd88364.528ENSPVAG00000000272CHD88464.043Pteropus_vampyrus
ENSORLG00020008031chd85367.197ENSPVAG00000011873CHD75167.012Pteropus_vampyrus
ENSORLG00020008031chd86161.622ENSPNYG00000012490chd76461.691Pundamilia_nyererei
ENSORLG00020008031chd810085.456ENSPNYG00000018020chd810085.187Pundamilia_nyererei
ENSORLG00020008031chd85663.616ENSPNAG00000011245chd76263.820Pygocentrus_nattereri
ENSORLG00020008031chd810069.901ENSPNAG00000003683chd810070.038Pygocentrus_nattereri
ENSORLG00020008031chd86263.717ENSRNOG00000006689Chd75363.186Rattus_norvegicus
ENSORLG00020008031chd88961.974ENSRNOG00000025011Chd88661.182Rattus_norvegicus
ENSORLG00020008031chd89058.467ENSRBIG00000039239CHD88363.794Rhinopithecus_bieti
ENSORLG00020008031chd86164.669ENSSBOG00000021462CHD75363.289Saimiri_boliviensis_boliviensis
ENSORLG00020008031chd89061.759ENSSHAG00000008118CHD88561.198Sarcophilus_harrisii
ENSORLG00020008031chd86263.421ENSSHAG00000011522CHD75462.328Sarcophilus_harrisii
ENSORLG00020008031chd86165.278ENSSFOG00015015077chd75465.347Scleropages_formosus
ENSORLG00020008031chd88273.496ENSSFOG00015011577chd810068.198Scleropages_formosus
ENSORLG00020008031chd810082.122ENSSMAG00000014060chd810083.612Scophthalmus_maximus
ENSORLG00020008031chd85462.943ENSSMAG00000001453-5462.589Scophthalmus_maximus
ENSORLG00020008031chd810086.151ENSSDUG00000012439chd810086.264Seriola_dumerili
ENSORLG00020008031chd810083.250ENSSLDG00000001679chd810084.618Seriola_lalandi_dorsalis
ENSORLG00020008031chd87568.908ENSSARG00000004849CHD89164.210Sorex_araneus
ENSORLG00020008031chd86362.836ENSSPUG00000009235CHD75462.903Sphenodon_punctatus
ENSORLG00020008031chd86065.542ENSSPAG00000006320chd75765.520Stegastes_partitus
ENSORLG00020008031chd810085.416ENSSPAG00000022956chd810085.124Stegastes_partitus
ENSORLG00020008031chd86164.669ENSSSCG00000006231CHD75363.289Sus_scrofa
ENSORLG00020008031chd89061.792ENSSSCG00000002127CHD88561.371Sus_scrofa
ENSORLG00020008031chd810078.807ENSTRUG00000006682chd89887.661Takifugu_rubripes
ENSORLG00020008031chd85168.634ENSTRUG00000008632chd75468.383Takifugu_rubripes
ENSORLG00020008031chd88580.621ENSTNIG00000007932chd810077.032Tetraodon_nigroviridis
ENSORLG00020008031chd86163.368ENSTNIG00000002647chd76863.212Tetraodon_nigroviridis
ENSORLG00020008031chd87567.130ENSTTRG00000016076CHD87366.909Tursiops_truncatus
ENSORLG00020008031chd86164.763ENSUAMG00000025734CHD75962.596Ursus_americanus
ENSORLG00020008031chd86073.543ENSUAMG00000004198CHD89974.765Ursus_americanus
ENSORLG00020008031chd89061.477ENSUMAG00000004045CHD87874.678Ursus_maritimus
ENSORLG00020008031chd86164.694ENSUMAG00000010436CHD77064.692Ursus_maritimus
ENSORLG00020008031chd85876.812ENSVPAG00000007359CHD85181.250Vicugna_pacos
ENSORLG00020008031chd86164.509ENSVVUG00000018063CHD75363.003Vulpes_vulpes
ENSORLG00020008031chd86758.838ENSXETG00000026004chd85363.805Xenopus_tropicalis
ENSORLG00020008031chd89252.772ENSXETG00000017194CHD89974.899Xenopus_tropicalis

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