EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020008048 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 2466 bases
Position: chr5:2351201-2353666
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025891	RRM_1	PF00076.22	1.5e-30	1	2
ENSORLP00020025891	RRM_1	PF00076.22	1.5e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020003345	-	2466	-	ENSORLP00020025891	821 (aa)	-	-

Gene Model

Click here to download ENSORLG00020008048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020008048	-	100	61.222	ENSORLG00020011223	rbm15	100	61.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020008048	-	100	53.789	ENSG00000162775	RBM15	98	55.098	Homo_sapiens
ENSORLG00020008048	-	100	59.977	ENSAPOG00000018748	rbm15	100	60.210	Acanthochromis_polyacanthus
ENSORLG00020008048	-	96	72.549	ENSAPOG00000017590	-	100	73.039	Acanthochromis_polyacanthus
ENSORLG00020008048	-	87	57.071	ENSAMEG00000011540	RBM15	95	55.098	Ailuropoda_melanoleuca
ENSORLG00020008048	-	100	72.802	ENSACIG00000019811	-	100	74.209	Amphilophus_citrinellus
ENSORLG00020008048	-	100	59.653	ENSACIG00000004343	rbm15	100	59.745	Amphilophus_citrinellus
ENSORLG00020008048	-	100	59.977	ENSAOCG00000016849	rbm15	100	60.210	Amphiprion_ocellaris
ENSORLG00020008048	-	100	73.592	ENSAOCG00000021969	-	100	73.913	Amphiprion_ocellaris
ENSORLG00020008048	-	100	59.977	ENSAPEG00000020077	rbm15	100	60.210	Amphiprion_percula
ENSORLG00020008048	-	99	73.616	ENSAPEG00000015151	-	98	74.087	Amphiprion_percula
ENSORLG00020008048	-	100	74.560	ENSATEG00000005926	-	100	75.029	Anabas_testudineus
ENSORLG00020008048	-	100	60.468	ENSATEG00000019337	rbm15	100	60.819	Anabas_testudineus
ENSORLG00020008048	-	99	53.155	ENSANAG00000020673	RBM15	94	54.723	Aotus_nancymaae
ENSORLG00020008048	-	99	72.941	ENSACLG00000022961	-	97	72.824	Astatotilapia_calliptera
ENSORLG00020008048	-	100	59.285	ENSACLG00000001673	rbm15	100	59.722	Astatotilapia_calliptera
ENSORLG00020008048	-	100	61.653	ENSAMXG00000026103	rbm15	100	62.558	Astyanax_mexicanus
ENSORLG00020008048	-	99	53.961	ENSBTAG00000012555	RBM15	95	55.531	Bos_taurus
ENSORLG00020008048	-	99	53.312	ENSCJAG00000003411	RBM15	94	54.744	Callithrix_jacchus
ENSORLG00020008048	-	99	53.680	ENSCAFG00000019789	RBM15	94	54.832	Canis_familiaris
ENSORLG00020008048	-	99	53.622	ENSCAFG00020009671	RBM15	94	54.832	Canis_lupus_dingo
ENSORLG00020008048	-	99	53.583	ENSCHIG00000026774	RBM15	95	55.315	Capra_hircus
ENSORLG00020008048	-	99	53.011	ENSTSYG00000000106	RBM15	94	54.360	Carlito_syrichta
ENSORLG00020008048	-	71	54.671	ENSCAPG00000013057	RBM15	98	54.505	Cavia_aperea
ENSORLG00020008048	-	99	52.077	ENSCPOG00000007520	RBM15	95	54.045	Cavia_porcellus
ENSORLG00020008048	-	99	52.463	ENSCCAG00000036780	RBM15	94	54.723	Cebus_capucinus
ENSORLG00020008048	-	99	53.319	ENSCATG00000015743	RBM15	94	55.157	Cercocebus_atys
ENSORLG00020008048	-	99	53.085	ENSCLAG00000008406	RBM15	95	55.076	Chinchilla_lanigera
ENSORLG00020008048	-	99	53.319	ENSCSAG00000001563	RBM15	93	55.000	Chlorocebus_sabaeus
ENSORLG00020008048	-	87	54.369	ENSCPBG00000001662	RBM15	100	52.371	Chrysemys_picta_bellii
ENSORLG00020008048	-	87	57.143	ENSCANG00000038717	RBM15	93	54.762	Colobus_angolensis_palliatus
ENSORLG00020008048	-	99	52.922	ENSCGRG00001001004	Rbm15	95	54.208	Cricetulus_griseus_chok1gshd
ENSORLG00020008048	-	99	52.922	ENSCGRG00000010592	Rbm15	95	54.208	Cricetulus_griseus_crigri
ENSORLG00020008048	-	100	60.514	ENSCSEG00000004062	rbm15	100	60.397	Cynoglossus_semilaevis
ENSORLG00020008048	-	100	62.959	ENSCSEG00000002314	-	100	62.399	Cynoglossus_semilaevis
ENSORLG00020008048	-	100	68.949	ENSCVAG00000004005	-	100	68.831	Cyprinodon_variegatus
ENSORLG00020008048	-	100	58.968	ENSCVAG00000013185	rbm15	100	59.086	Cyprinodon_variegatus
ENSORLG00020008048	-	100	60.930	ENSDARG00000073847	rbm15	100	61.628	Danio_rerio
ENSORLG00020008048	-	64	56.406	ENSDNOG00000032007	RBM15	82	60.102	Dasypus_novemcinctus
ENSORLG00020008048	-	87	57.035	ENSDORG00000005669	Rbm15	100	54.054	Dipodomys_ordii
ENSORLG00020008048	-	99	53.098	ENSEASG00005005359	RBM15	95	55.071	Equus_asinus_asinus
ENSORLG00020008048	-	99	53.098	ENSECAG00000023660	RBM15	95	55.071	Equus_caballus
ENSORLG00020008048	-	100	64.395	ENSELUG00000014614	RBM15	100	64.512	Esox_lucius
ENSORLG00020008048	-	99	57.256	ENSELUG00000016087	rbm15	97	57.256	Esox_lucius
ENSORLG00020008048	-	99	53.205	ENSFCAG00000028208	RBM15	94	54.989	Felis_catus
ENSORLG00020008048	-	67	57.265	ENSFALG00000003062	RBM15	98	58.020	Ficedula_albicollis
ENSORLG00020008048	-	99	52.816	ENSFDAG00000020743	RBM15	95	54.486	Fukomys_damarensis
ENSORLG00020008048	-	100	69.668	ENSFHEG00000005559	-	100	69.359	Fundulus_heteroclitus
ENSORLG00020008048	-	100	58.617	ENSFHEG00000005024	rbm15	100	58.734	Fundulus_heteroclitus
ENSORLG00020008048	-	62	65.854	ENSGMOG00000019941	rbm15	99	65.478	Gadus_morhua
ENSORLG00020008048	-	87	53.333	ENSGALG00000000401	RBM15	100	51.713	Gallus_gallus
ENSORLG00020008048	-	100	58.442	ENSGAFG00000001534	rbm15	98	58.205	Gambusia_affinis
ENSORLG00020008048	-	100	69.550	ENSGAFG00000021611	-	96	69.076	Gambusia_affinis
ENSORLG00020008048	-	99	70.406	ENSGACG00000001022	-	99	70.406	Gasterosteus_aculeatus
ENSORLG00020008048	-	100	59.532	ENSGACG00000007932	rbm15	99	59.766	Gasterosteus_aculeatus
ENSORLG00020008048	-	87	54.678	ENSGAGG00000012252	RBM15	100	51.955	Gopherus_agassizii
ENSORLG00020008048	-	99	53.690	ENSGGOG00000003655	RBM15	93	55.098	Gorilla_gorilla
ENSORLG00020008048	-	100	72.770	ENSHBUG00000003220	-	100	72.653	Haplochromis_burtoni
ENSORLG00020008048	-	100	59.127	ENSHBUG00000022227	rbm15	100	59.562	Haplochromis_burtoni
ENSORLG00020008048	-	99	53.085	ENSHGLG00000014811	RBM15	95	54.762	Heterocephalus_glaber_female
ENSORLG00020008048	-	99	53.085	ENSHGLG00100017137	RBM15	95	54.762	Heterocephalus_glaber_male
ENSORLG00020008048	-	100	61.520	ENSHCOG00000005229	RBM15	100	61.758	Hippocampus_comes
ENSORLG00020008048	-	100	58.528	ENSHCOG00000004048	rbm15	100	58.879	Hippocampus_comes
ENSORLG00020008048	-	100	60.371	ENSIPUG00000004415	RBM15	100	61.040	Ictalurus_punctatus
ENSORLG00020008048	-	99	52.581	ENSSTOG00000026597	RBM15	95	54.605	Ictidomys_tridecemlineatus
ENSORLG00020008048	-	87	57.393	ENSJJAG00000021795	Rbm15	95	55.027	Jaculus_jaculus
ENSORLG00020008048	-	100	65.389	ENSKMAG00000021291	-	99	65.711	Kryptolebias_marmoratus
ENSORLG00020008048	-	100	59.883	ENSKMAG00000017681	rbm15	100	60.351	Kryptolebias_marmoratus
ENSORLG00020008048	-	100	59.091	ENSLBEG00000008274	rbm15	100	59.441	Labrus_bergylta
ENSORLG00020008048	-	96	69.890	ENSLBEG00000013105	-	100	69.485	Labrus_bergylta
ENSORLG00020008048	-	100	57.822	ENSLACG00000018372	RBM15	100	57.870	Latimeria_chalumnae
ENSORLG00020008048	-	100	60.939	ENSLOCG00000017940	rbm15	100	62.243	Lepisosteus_oculatus
ENSORLG00020008048	-	99	53.233	ENSLAFG00000012897	RBM15	95	55.483	Loxodonta_africana
ENSORLG00020008048	-	99	53.212	ENSMFAG00000029929	RBM15	94	55.049	Macaca_fascicularis
ENSORLG00020008048	-	99	53.212	ENSMMUG00000015020	RBM15	94	55.049	Macaca_mulatta
ENSORLG00020008048	-	99	53.212	ENSMNEG00000045235	RBM15	94	55.049	Macaca_nemestrina
ENSORLG00020008048	-	99	53.319	ENSMLEG00000035727	RBM15	93	55.000	Mandrillus_leucophaeus
ENSORLG00020008048	-	100	59.535	ENSMAMG00000010732	rbm15	100	59.884	Mastacembelus_armatus
ENSORLG00020008048	-	96	67.312	ENSMAMG00000023921	-	100	68.644	Mastacembelus_armatus
ENSORLG00020008048	-	99	72.941	ENSMZEG00005010876	-	98	72.824	Maylandia_zebra
ENSORLG00020008048	-	100	59.285	ENSMZEG00005006595	rbm15	100	59.722	Maylandia_zebra
ENSORLG00020008048	-	99	53.297	ENSMAUG00000007198	Rbm15	95	54.585	Mesocricetus_auratus
ENSORLG00020008048	-	99	53.155	ENSMICG00000005255	RBM15	95	54.654	Microcebus_murinus
ENSORLG00020008048	-	99	52.865	ENSMOCG00000013142	Rbm15	95	54.367	Microtus_ochrogaster
ENSORLG00020008048	-	100	59.627	ENSMMOG00000002357	rbm15	100	59.674	Mola_mola
ENSORLG00020008048	-	100	67.503	ENSMMOG00000021778	-	100	67.981	Mola_mola
ENSORLG00020008048	-	100	67.995	ENSMALG00000017867	-	100	68.310	Monopterus_albus
ENSORLG00020008048	-	100	60.514	ENSMALG00000019648	rbm15	100	60.443	Monopterus_albus
ENSORLG00020008048	-	99	52.916	MGP_CAROLIEiJ_G0025501	Rbm15	95	54.308	Mus_caroli
ENSORLG00020008048	-	99	52.916	ENSMUSG00000048109	Rbm15	95	54.308	Mus_musculus
ENSORLG00020008048	-	99	52.916	MGP_PahariEiJ_G0026947	Rbm15	95	54.308	Mus_pahari
ENSORLG00020008048	-	99	52.916	MGP_SPRETEiJ_G0026451	Rbm15	95	54.308	Mus_spretus
ENSORLG00020008048	-	99	53.362	ENSMPUG00000003822	RBM15	94	55.255	Mustela_putorius_furo
ENSORLG00020008048	-	99	52.802	ENSMLUG00000007169	RBM15	94	54.923	Myotis_lucifugus
ENSORLG00020008048	-	99	52.694	ENSNGAG00000011394	Rbm15	95	54.733	Nannospalax_galili
ENSORLG00020008048	-	100	59.242	ENSNBRG00000003947	rbm15	100	59.562	Neolamprologus_brichardi
ENSORLG00020008048	-	100	59.242	ENSNBRG00000008870	rbm15	100	59.562	Neolamprologus_brichardi
ENSORLG00020008048	-	100	72.418	ENSNBRG00000005460	-	100	72.300	Neolamprologus_brichardi
ENSORLG00020008048	-	99	53.262	ENSNLEG00000003601	RBM15	93	55.604	Nomascus_leucogenys
ENSORLG00020008048	-	87	57.379	ENSMEUG00000015940	RBM15	93	54.967	Notamacropus_eugenii
ENSORLG00020008048	-	100	53.491	ENSODEG00000019343	RBM15	100	54.762	Octodon_degus
ENSORLG00020008048	-	96	72.749	ENSONIG00000018955	-	100	72.628	Oreochromis_niloticus
ENSORLG00020008048	-	100	60.186	ENSONIG00000002532	rbm15	100	60.514	Oreochromis_niloticus
ENSORLG00020008048	-	99	53.048	ENSOCUG00000002434	RBM15	94	54.832	Oryctolagus_cuniculus
ENSORLG00020008048	-	100	61.105	ENSORLG00000006197	rbm15	100	61.105	Oryzias_latipes
ENSORLG00020008048	-	100	98.180	ENSORLG00000000433	-	99	98.180	Oryzias_latipes
ENSORLG00020008048	-	100	61.105	ENSORLG00015003078	rbm15	100	61.105	Oryzias_latipes_hsok
ENSORLG00020008048	-	100	98.305	ENSORLG00015004063	-	100	98.305	Oryzias_latipes_hsok
ENSORLG00020008048	-	100	59.766	ENSOMEG00000020683	rbm15	100	60.186	Oryzias_melastigma
ENSORLG00020008048	-	100	85.301	ENSOMEG00000014662	-	100	87.365	Oryzias_melastigma
ENSORLG00020008048	-	100	53.053	ENSOGAG00000009182	RBM15	100	55.556	Otolemur_garnettii
ENSORLG00020008048	-	99	53.426	ENSOARG00000019430	RBM15	93	54.940	Ovis_aries
ENSORLG00020008048	-	99	53.690	ENSPPAG00000041967	RBM15	93	55.098	Pan_paniscus
ENSORLG00020008048	-	99	53.205	ENSPPRG00000013347	RBM15	94	54.989	Panthera_pardus
ENSORLG00020008048	-	99	54.217	ENSPTIG00000010318	RBM15	94	54.885	Panthera_tigris_altaica
ENSORLG00020008048	-	99	53.690	ENSPTRG00000001074	RBM15	94	54.891	Pan_troglodytes
ENSORLG00020008048	-	99	53.319	ENSPANG00000020891	RBM15	94	55.157	Papio_anubis
ENSORLG00020008048	-	89	57.673	ENSPKIG00000013584	rbm15	96	57.673	Paramormyrops_kingsleyae
ENSORLG00020008048	-	100	63.195	ENSPKIG00000003067	-	100	62.840	Paramormyrops_kingsleyae
ENSORLG00020008048	-	59	51.371	ENSPSIG00000001607	RBM15	100	51.737	Pelodiscus_sinensis
ENSORLG00020008048	-	100	67.264	ENSPMGG00000017642	-	100	67.742	Periophthalmus_magnuspinnatus
ENSORLG00020008048	-	100	58.657	ENSPMGG00000016039	rbm15	100	58.422	Periophthalmus_magnuspinnatus
ENSORLG00020008048	-	99	52.909	ENSPEMG00000000014	Rbm15	95	53.946	Peromyscus_maniculatus_bairdii
ENSORLG00020008048	-	87	57.342	ENSPCIG00000003458	RBM15	94	53.996	Phascolarctos_cinereus
ENSORLG00020008048	-	99	58.049	ENSPFOG00000012754	rbm15	97	58.049	Poecilia_formosa
ENSORLG00020008048	-	100	71.124	ENSPLAG00000015343	-	100	70.769	Poecilia_latipinna
ENSORLG00020008048	-	100	58.879	ENSPLAG00000003560	rbm15	100	58.879	Poecilia_latipinna
ENSORLG00020008048	-	100	58.879	ENSPMEG00000002049	rbm15	100	58.879	Poecilia_mexicana
ENSORLG00020008048	-	100	71.006	ENSPMEG00000001923	-	100	70.651	Poecilia_mexicana
ENSORLG00020008048	-	100	58.782	ENSPREG00000014581	rbm15	100	58.782	Poecilia_reticulata
ENSORLG00020008048	-	100	71.158	ENSPREG00000004167	-	100	70.922	Poecilia_reticulata
ENSORLG00020008048	-	99	53.155	ENSPPYG00000001051	RBM15	94	54.783	Pongo_abelii
ENSORLG00020008048	-	66	45.088	ENSPPYG00000015734	-	99	45.201	Pongo_abelii
ENSORLG00020008048	-	64	55.987	ENSPCAG00000006329	RBM15	62	58.065	Procavia_capensis
ENSORLG00020008048	-	99	53.255	ENSPCOG00000019767	RBM15	94	54.849	Propithecus_coquereli
ENSORLG00020008048	-	99	53.476	ENSPVAG00000007193	RBM15	93	54.635	Pteropus_vampyrus
ENSORLG00020008048	-	100	73.239	ENSPNYG00000007434	-	100	73.122	Pundamilia_nyererei
ENSORLG00020008048	-	100	59.039	ENSPNYG00000005143	rbm15	100	59.013	Pundamilia_nyererei
ENSORLG00020008048	-	100	61.503	ENSPNAG00000007496	rbm15	100	62.269	Pygocentrus_nattereri
ENSORLG00020008048	-	99	52.700	ENSRNOG00000047499	Rbm15	95	54.198	Rattus_norvegicus
ENSORLG00020008048	-	99	53.212	ENSRBIG00000044261	RBM15	94	54.891	Rhinopithecus_bieti
ENSORLG00020008048	-	99	53.212	ENSRROG00000045519	RBM15	94	54.891	Rhinopithecus_roxellana
ENSORLG00020008048	-	99	52.463	ENSSBOG00000021394	RBM15	94	54.881	Saimiri_boliviensis_boliviensis
ENSORLG00020008048	-	100	71.645	ENSSMAG00000000431	-	99	71.963	Scophthalmus_maximus
ENSORLG00020008048	-	100	60.023	ENSSMAG00000019106	rbm15	100	60.000	Scophthalmus_maximus
ENSORLG00020008048	-	100	59.651	ENSSDUG00000008769	rbm15	100	59.884	Seriola_dumerili
ENSORLG00020008048	-	100	74.070	ENSSDUG00000009424	-	100	73.807	Seriola_dumerili
ENSORLG00020008048	-	100	59.488	ENSSLDG00000002691	rbm15	100	59.721	Seriola_lalandi_dorsalis
ENSORLG00020008048	-	100	74.302	ENSSLDG00000022441	-	100	74.040	Seriola_lalandi_dorsalis
ENSORLG00020008048	-	56	69.006	ENSSARG00000000360	RBM15	83	56.264	Sorex_araneus
ENSORLG00020008048	-	100	74.734	ENSSPAG00000007739	-	99	75.325	Stegastes_partitus
ENSORLG00020008048	-	100	59.579	ENSSPAG00000004965	rbm15	100	59.813	Stegastes_partitus
ENSORLG00020008048	-	87	57.410	ENSSSCG00000006809	RBM15	100	55.076	Sus_scrofa
ENSORLG00020008048	-	66	56.110	ENSTGUG00000000886	RBM15	99	57.143	Taeniopygia_guttata
ENSORLG00020008048	-	99	67.857	ENSTRUG00000007851	-	97	67.500	Takifugu_rubripes
ENSORLG00020008048	-	100	59.390	ENSTRUG00000002921	rbm15	100	59.507	Takifugu_rubripes
ENSORLG00020008048	-	100	57.728	ENSTNIG00000015129	rbm15	99	57.963	Tetraodon_nigroviridis
ENSORLG00020008048	-	87	57.625	ENSTBEG00000008339	RBM15	93	55.471	Tupaia_belangeri
ENSORLG00020008048	-	99	53.747	ENSTTRG00000001317	RBM15	93	54.968	Tursiops_truncatus
ENSORLG00020008048	-	87	57.357	ENSUAMG00000017330	RBM15	95	55.087	Ursus_americanus
ENSORLG00020008048	-	99	53.205	ENSUMAG00000013623	RBM15	94	54.940	Ursus_maritimus
ENSORLG00020008048	-	99	53.622	ENSVVUG00000002929	RBM15	94	54.674	Vulpes_vulpes
ENSORLG00020008048	-	100	53.584	ENSXETG00000002029	rbm15	100	54.492	Xenopus_tropicalis
ENSORLG00020008048	-	100	59.016	ENSXCOG00000006328	rbm15	100	58.782	Xiphophorus_couchianus
ENSORLG00020008048	-	100	70.567	ENSXCOG00000003003	-	100	70.331	Xiphophorus_couchianus
ENSORLG00020008048	-	100	70.651	ENSXMAG00000009062	-	100	70.414	Xiphophorus_maculatus
ENSORLG00020008048	-	100	59.016	ENSXMAG00000020192	rbm15	100	58.782	Xiphophorus_maculatus