EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020008094 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-37o8.1
Alias: -
Full Name: 42Sp50
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 6402 bases
Position: chr20:19386940-19393341
Accession: 100049338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020007214	GTP_EFTU	PF00009.27	3.5e-53	1	1
ENSORLP00020007214	MMR_HSR1	PF01926.23	4.4e-07	1	1
ENSORLP00020007214	GTP_EFTU_D2	PF03144.25	1.5e-12	1	1
ENSORLP00020007214	GTP_EFTU_D3	PF03143.17	1.5e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020003283	-	5964	-	ENSORLP00020007214	456 (aa)	-	Q9W7D6

Gene Model

Click here to download ENSORLG00020008094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020008094	si:dkey-37o8.1	100	64.912	ENSORLG00020018651	-	60	83.333
ENSORLG00020008094	si:dkey-37o8.1	96	37.528	ENSORLG00020003827	hbs1l	61	37.528
ENSORLG00020008094	si:dkey-37o8.1	97	39.238	ENSORLG00020016364	gspt1l	78	39.238
ENSORLG00020008094	si:dkey-37o8.1	96	38.776	ENSORLG00020006749	-	73	38.789
ENSORLG00020008094	si:dkey-37o8.1	97	71.558	ENSORLG00020012076	eef1a	96	71.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020008094	si:dkey-37o8.1	100	89.693	ENSAPOG00000016459	si:dkey-37o8.1	100	89.693	Acanthochromis_polyacanthus
ENSORLG00020008094	si:dkey-37o8.1	96	89.016	ENSACIG00000020985	si:dkey-37o8.1	82	89.016	Amphilophus_citrinellus
ENSORLG00020008094	si:dkey-37o8.1	100	91.466	ENSAOCG00000002663	si:dkey-37o8.1	100	91.466	Amphiprion_ocellaris
ENSORLG00020008094	si:dkey-37o8.1	100	91.466	ENSAPEG00000012670	si:dkey-37o8.1	100	91.466	Amphiprion_percula
ENSORLG00020008094	si:dkey-37o8.1	93	92.180	ENSATEG00000002217	si:dkey-37o8.1	99	92.180	Anabas_testudineus
ENSORLG00020008094	si:dkey-37o8.1	100	90.789	ENSACLG00000003519	si:dkey-37o8.1	100	90.789	Astatotilapia_calliptera
ENSORLG00020008094	si:dkey-37o8.1	100	85.153	ENSAMXG00000002728	si:dkey-37o8.1	100	85.153	Astyanax_mexicanus
ENSORLG00020008094	si:dkey-37o8.1	98	73.154	ENSCPBG00000020570	-	87	74.260	Chrysemys_picta_bellii
ENSORLG00020008094	si:dkey-37o8.1	100	84.532	ENSCSEG00000019807	si:dkey-37o8.1	100	83.836	Cynoglossus_semilaevis
ENSORLG00020008094	si:dkey-37o8.1	99	89.648	ENSCVAG00000009828	si:dkey-37o8.1	99	89.648	Cyprinodon_variegatus
ENSORLG00020008094	si:dkey-37o8.1	100	82.096	ENSDARG00000071727	si:dkey-37o8.1	95	82.096	Danio_rerio
ENSORLG00020008094	si:dkey-37o8.1	100	84.498	ENSELUG00000007495	si:dkey-37o8.1	100	84.498	Esox_lucius
ENSORLG00020008094	si:dkey-37o8.1	99	89.579	ENSFHEG00000017452	si:dkey-37o8.1	99	89.579	Fundulus_heteroclitus
ENSORLG00020008094	si:dkey-37o8.1	99	80.396	ENSGMOG00000006122	si:dkey-37o8.1	100	80.396	Gadus_morhua
ENSORLG00020008094	si:dkey-37o8.1	98	84.152	ENSGAFG00000000367	si:dkey-37o8.1	99	84.152	Gambusia_affinis
ENSORLG00020008094	si:dkey-37o8.1	100	87.090	ENSGACG00000004505	si:dkey-37o8.1	100	87.090	Gasterosteus_aculeatus
ENSORLG00020008094	si:dkey-37o8.1	96	74.943	ENSGAGG00000007724	-	93	77.885	Gopherus_agassizii
ENSORLG00020008094	si:dkey-37o8.1	100	90.570	ENSHBUG00000015515	si:dkey-37o8.1	100	90.570	Haplochromis_burtoni
ENSORLG00020008094	si:dkey-37o8.1	99	80.266	ENSHCOG00000001215	si:dkey-37o8.1	100	80.266	Hippocampus_comes
ENSORLG00020008094	si:dkey-37o8.1	100	83.188	ENSIPUG00000004067	si:dkey-37o8.1	100	83.188	Ictalurus_punctatus
ENSORLG00020008094	si:dkey-37o8.1	100	88.621	ENSKMAG00000015910	si:dkey-37o8.1	100	88.621	Kryptolebias_marmoratus
ENSORLG00020008094	si:dkey-37o8.1	100	90.132	ENSLBEG00000021334	si:dkey-37o8.1	90	90.132	Labrus_bergylta
ENSORLG00020008094	si:dkey-37o8.1	99	75.610	ENSLACG00000003948	si:dkey-37o8.1	98	75.610	Latimeria_chalumnae
ENSORLG00020008094	si:dkey-37o8.1	99	79.912	ENSLOCG00000011245	si:dkey-37o8.1	99	79.912	Lepisosteus_oculatus
ENSORLG00020008094	si:dkey-37o8.1	99	74.058	ENSMAMG00000009907	si:dkey-37o8.1	94	74.058	Mastacembelus_armatus
ENSORLG00020008094	si:dkey-37o8.1	100	90.789	ENSMZEG00005018358	si:dkey-37o8.1	100	90.789	Maylandia_zebra
ENSORLG00020008094	si:dkey-37o8.1	99	89.778	ENSMMOG00000004111	si:dkey-37o8.1	98	89.778	Mola_mola
ENSORLG00020008094	si:dkey-37o8.1	96	80.365	ENSMALG00000017152	si:dkey-37o8.1	99	80.365	Monopterus_albus
ENSORLG00020008094	si:dkey-37o8.1	100	90.570	ENSNBRG00000013552	si:dkey-37o8.1	100	90.570	Neolamprologus_brichardi
ENSORLG00020008094	si:dkey-37o8.1	100	90.132	ENSONIG00000006165	si:dkey-37o8.1	100	90.132	Oreochromis_niloticus
ENSORLG00020008094	si:dkey-37o8.1	100	100.000	ENSORLG00000019066	si:dkey-37o8.1	100	100.000	Oryzias_latipes
ENSORLG00020008094	si:dkey-37o8.1	100	99.342	ENSORLG00015008410	si:dkey-37o8.1	100	99.342	Oryzias_latipes_hsok
ENSORLG00020008094	si:dkey-37o8.1	100	96.711	ENSOMEG00000001868	si:dkey-37o8.1	100	96.711	Oryzias_melastigma
ENSORLG00020008094	si:dkey-37o8.1	100	82.353	ENSPKIG00000017246	si:dkey-37o8.1	100	82.353	Paramormyrops_kingsleyae
ENSORLG00020008094	si:dkey-37o8.1	58	67.897	ENSPSIG00000008080	-	95	67.897	Pelodiscus_sinensis
ENSORLG00020008094	si:dkey-37o8.1	100	90.810	ENSPFOG00000013173	si:dkey-37o8.1	100	90.810	Poecilia_formosa
ENSORLG00020008094	si:dkey-37o8.1	100	89.278	ENSPLAG00000010405	si:dkey-37o8.1	100	89.278	Poecilia_latipinna
ENSORLG00020008094	si:dkey-37o8.1	100	90.591	ENSPMEG00000015233	si:dkey-37o8.1	100	90.591	Poecilia_mexicana
ENSORLG00020008094	si:dkey-37o8.1	99	90.308	ENSPREG00000006280	si:dkey-37o8.1	100	90.308	Poecilia_reticulata
ENSORLG00020008094	si:dkey-37o8.1	100	90.570	ENSPNYG00000002059	si:dkey-37o8.1	100	90.570	Pundamilia_nyererei
ENSORLG00020008094	si:dkey-37o8.1	100	84.498	ENSPNAG00000009990	si:dkey-37o8.1	100	84.498	Pygocentrus_nattereri
ENSORLG00020008094	si:dkey-37o8.1	98	82.000	ENSSFOG00015019070	si:dkey-37o8.1	99	82.000	Scleropages_formosus
ENSORLG00020008094	si:dkey-37o8.1	100	90.789	ENSSMAG00000016143	si:dkey-37o8.1	100	90.789	Scophthalmus_maximus
ENSORLG00020008094	si:dkey-37o8.1	100	91.466	ENSSDUG00000009163	si:dkey-37o8.1	100	91.466	Seriola_dumerili
ENSORLG00020008094	si:dkey-37o8.1	100	91.247	ENSSLDG00000023761	si:dkey-37o8.1	100	91.247	Seriola_lalandi_dorsalis
ENSORLG00020008094	si:dkey-37o8.1	99	71.681	ENSSPUG00000007467	-	98	71.681	Sphenodon_punctatus
ENSORLG00020008094	si:dkey-37o8.1	100	91.028	ENSSPAG00000013856	si:dkey-37o8.1	100	91.028	Stegastes_partitus
ENSORLG00020008094	si:dkey-37o8.1	99	89.845	ENSTRUG00000009006	si:dkey-37o8.1	100	89.845	Takifugu_rubripes
ENSORLG00020008094	si:dkey-37o8.1	99	89.451	ENSTNIG00000017138	si:dkey-37o8.1	98	89.451	Tetraodon_nigroviridis
ENSORLG00020008094	si:dkey-37o8.1	96	75.626	ENSXETG00000017744	42Sp50	97	74.554	Xenopus_tropicalis
ENSORLG00020008094	si:dkey-37o8.1	99	90.088	ENSXCOG00000012296	si:dkey-37o8.1	100	90.110	Xiphophorus_couchianus
ENSORLG00020008094	si:dkey-37o8.1	100	90.591	ENSXMAG00000001998	si:dkey-37o8.1	100	90.591	Xiphophorus_maculatus