EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020008145 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: -
Full Name: si:ch211-212k18.5
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 7849 bases
Position: chr18:15964774-15972622
Accession: ZDB-GENE-030131-379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025932	zf-C2H2	PF00096.26	1.5e-18	1	2
ENSORLP00020025932	zf-C2H2	PF00096.26	1.5e-18	2	2
ENSORLP00020025932	zf-met	PF12874.7	4.1e-11	1	2
ENSORLP00020025932	zf-met	PF12874.7	4.1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020003161	-	5551	-	ENSORLP00020025932	1180 (aa)	-	-

Gene Model

Click here to download ENSORLG00020008145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008145's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020008145	si:ch211-212k18.5	61	46.533	ENSORLG00020007873	sall2	61	67.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020008145	si:ch211-212k18.5	99	71.358	ENSAPOG00000013387	si:ch211-212k18.5	99	71.687	Acanthochromis_polyacanthus
ENSORLG00020008145	si:ch211-212k18.5	59	57.692	ENSAPOG00000015347	sall2	56	70.270	Acanthochromis_polyacanthus
ENSORLG00020008145	si:ch211-212k18.5	78	79.533	ENSACIG00000019922	si:ch211-212k18.5	96	80.276	Amphilophus_citrinellus
ENSORLG00020008145	si:ch211-212k18.5	100	69.156	ENSAOCG00000010737	si:ch211-212k18.5	100	68.725	Amphiprion_ocellaris
ENSORLG00020008145	si:ch211-212k18.5	100	69.318	ENSAPEG00000006751	si:ch211-212k18.5	100	68.887	Amphiprion_percula
ENSORLG00020008145	si:ch211-212k18.5	55	47.104	ENSAPEG00000020215	sall2	67	50.635	Amphiprion_percula
ENSORLG00020008145	si:ch211-212k18.5	77	79.132	ENSATEG00000001254	si:ch211-212k18.5	100	79.953	Anabas_testudineus
ENSORLG00020008145	si:ch211-212k18.5	99	70.141	ENSACLG00000009709	si:ch211-212k18.5	99	70.885	Astatotilapia_calliptera
ENSORLG00020008145	si:ch211-212k18.5	58	67.568	ENSACLG00000019867	sall2	63	67.568	Astatotilapia_calliptera
ENSORLG00020008145	si:ch211-212k18.5	97	54.600	ENSAMXG00000010979	si:ch211-212k18.5	99	52.579	Astyanax_mexicanus
ENSORLG00020008145	si:ch211-212k18.5	54	49.065	ENSAMXG00000020956	sall2	57	49.273	Astyanax_mexicanus
ENSORLG00020008145	si:ch211-212k18.5	99	66.749	ENSCSEG00000004426	si:ch211-212k18.5	99	66.448	Cynoglossus_semilaevis
ENSORLG00020008145	si:ch211-212k18.5	79	38.441	ENSCSEG00000021148	sall2	79	37.721	Cynoglossus_semilaevis
ENSORLG00020008145	si:ch211-212k18.5	99	68.219	ENSCVAG00000007475	si:ch211-212k18.5	99	68.525	Cyprinodon_variegatus
ENSORLG00020008145	si:ch211-212k18.5	59	54.717	ENSCVAG00000006032	sall2	62	72.727	Cyprinodon_variegatus
ENSORLG00020008145	si:ch211-212k18.5	99	54.074	ENSDARG00000103316	si:ch211-212k18.5	98	52.299	Danio_rerio
ENSORLG00020008145	si:ch211-212k18.5	70	48.305	ENSDARG00000075116	sall2	73	48.017	Danio_rerio
ENSORLG00020008145	si:ch211-212k18.5	98	55.255	ENSELUG00000024534	si:ch211-212k18.5	99	54.561	Esox_lucius
ENSORLG00020008145	si:ch211-212k18.5	74	71.795	ENSELUG00000004389	sall2	68	73.529	Esox_lucius
ENSORLG00020008145	si:ch211-212k18.5	99	69.011	ENSFHEG00000017264	si:ch211-212k18.5	99	69.615	Fundulus_heteroclitus
ENSORLG00020008145	si:ch211-212k18.5	59	53.846	ENSGAFG00000015194	sall2	59	45.182	Gambusia_affinis
ENSORLG00020008145	si:ch211-212k18.5	100	69.199	ENSGAFG00000003746	si:ch211-212k18.5	100	68.847	Gambusia_affinis
ENSORLG00020008145	si:ch211-212k18.5	58	67.568	ENSHBUG00000002882	sall2	57	67.568	Haplochromis_burtoni
ENSORLG00020008145	si:ch211-212k18.5	99	69.992	ENSHBUG00000019672	si:ch211-212k18.5	100	71.012	Haplochromis_burtoni
ENSORLG00020008145	si:ch211-212k18.5	99	59.299	ENSHCOG00000002842	si:ch211-212k18.5	99	59.614	Hippocampus_comes
ENSORLG00020008145	si:ch211-212k18.5	97	52.265	ENSIPUG00000002559	sall2	96	51.436	Ictalurus_punctatus
ENSORLG00020008145	si:ch211-212k18.5	99	70.138	ENSKMAG00000019657	si:ch211-212k18.5	99	70.382	Kryptolebias_marmoratus
ENSORLG00020008145	si:ch211-212k18.5	63	45.384	ENSKMAG00000020172	sall2	50	72.727	Kryptolebias_marmoratus
ENSORLG00020008145	si:ch211-212k18.5	99	67.543	ENSLBEG00000020887	si:ch211-212k18.5	99	67.132	Labrus_bergylta
ENSORLG00020008145	si:ch211-212k18.5	71	79.744	ENSMAMG00000015887	si:ch211-212k18.5	99	79.953	Mastacembelus_armatus
ENSORLG00020008145	si:ch211-212k18.5	66	45.956	ENSMAMG00000016229	sall2	62	71.429	Mastacembelus_armatus
ENSORLG00020008145	si:ch211-212k18.5	99	70.223	ENSMZEG00005021214	si:ch211-212k18.5	99	70.968	Maylandia_zebra
ENSORLG00020008145	si:ch211-212k18.5	58	67.568	ENSMZEG00005012103	sall2	57	67.568	Maylandia_zebra
ENSORLG00020008145	si:ch211-212k18.5	90	78.555	ENSMMOG00000012726	si:ch211-212k18.5	98	78.104	Mola_mola
ENSORLG00020008145	si:ch211-212k18.5	92	69.062	ENSMALG00000000979	si:ch211-212k18.5	97	68.799	Monopterus_albus
ENSORLG00020008145	si:ch211-212k18.5	99	65.497	ENSNBRG00000023948	si:ch211-212k18.5	99	66.639	Neolamprologus_brichardi
ENSORLG00020008145	si:ch211-212k18.5	73	44.171	ENSNBRG00000017645	sall2	99	38.546	Neolamprologus_brichardi
ENSORLG00020008145	si:ch211-212k18.5	62	46.438	ENSORLG00000026871	sall2	61	67.568	Oryzias_latipes
ENSORLG00020008145	si:ch211-212k18.5	100	98.136	ENSORLG00000030429	si:ch211-212k18.5	100	98.136	Oryzias_latipes
ENSORLG00020008145	si:ch211-212k18.5	61	46.729	ENSORLG00015002422	sall2	61	67.568	Oryzias_latipes_hsok
ENSORLG00020008145	si:ch211-212k18.5	100	98.051	ENSORLG00015004982	si:ch211-212k18.5	100	98.051	Oryzias_latipes_hsok
ENSORLG00020008145	si:ch211-212k18.5	100	89.298	ENSOMEG00000013949	si:ch211-212k18.5	100	89.482	Oryzias_melastigma
ENSORLG00020008145	si:ch211-212k18.5	60	59.184	ENSOMEG00000012904	sall2	59	45.982	Oryzias_melastigma
ENSORLG00020008145	si:ch211-212k18.5	95	63.204	ENSPMGG00000018714	si:ch211-212k18.5	99	63.533	Periophthalmus_magnuspinnatus
ENSORLG00020008145	si:ch211-212k18.5	59	55.769	ENSPFOG00000016504	sall2	61	44.973	Poecilia_formosa
ENSORLG00020008145	si:ch211-212k18.5	99	69.428	ENSPFOG00000023705	si:ch211-212k18.5	99	70.670	Poecilia_formosa
ENSORLG00020008145	si:ch211-212k18.5	99	69.536	ENSPLAG00000002577	si:ch211-212k18.5	99	69.428	Poecilia_latipinna
ENSORLG00020008145	si:ch211-212k18.5	59	55.769	ENSPLAG00000018320	sall2	59	45.490	Poecilia_latipinna
ENSORLG00020008145	si:ch211-212k18.5	59	55.769	ENSPMEG00000006335	sall2	59	45.254	Poecilia_mexicana
ENSORLG00020008145	si:ch211-212k18.5	99	69.428	ENSPMEG00000016395	si:ch211-212k18.5	99	70.496	Poecilia_mexicana
ENSORLG00020008145	si:ch211-212k18.5	61	55.769	ENSPREG00000021908	sall2	59	44.993	Poecilia_reticulata
ENSORLG00020008145	si:ch211-212k18.5	99	69.950	ENSPREG00000005292	si:ch211-212k18.5	99	69.594	Poecilia_reticulata
ENSORLG00020008145	si:ch211-212k18.5	99	67.025	ENSPNYG00000021576	si:ch211-212k18.5	99	67.851	Pundamilia_nyererei
ENSORLG00020008145	si:ch211-212k18.5	95	55.603	ENSPNAG00000006123	si:ch211-212k18.5	99	52.989	Pygocentrus_nattereri
ENSORLG00020008145	si:ch211-212k18.5	54	48.266	ENSPNAG00000021463	sall2	58	49.008	Pygocentrus_nattereri
ENSORLG00020008145	si:ch211-212k18.5	100	68.374	ENSSMAG00000006241	si:ch211-212k18.5	100	68.078	Scophthalmus_maximus
ENSORLG00020008145	si:ch211-212k18.5	76	58.929	ENSSMAG00000014157	sall2	70	72.973	Scophthalmus_maximus
ENSORLG00020008145	si:ch211-212k18.5	99	71.593	ENSSDUG00000006164	si:ch211-212k18.5	99	71.323	Seriola_dumerili
ENSORLG00020008145	si:ch211-212k18.5	60	57.627	ENSSDUG00000012274	sall2	56	67.568	Seriola_dumerili
ENSORLG00020008145	si:ch211-212k18.5	99	73.563	ENSSLDG00000003393	si:ch211-212k18.5	99	72.884	Seriola_lalandi_dorsalis
ENSORLG00020008145	si:ch211-212k18.5	77	57.627	ENSSLDG00000001653	sall2	56	67.568	Seriola_lalandi_dorsalis
ENSORLG00020008145	si:ch211-212k18.5	95	70.848	ENSSPAG00000013435	si:ch211-212k18.5	97	70.649	Stegastes_partitus
ENSORLG00020008145	si:ch211-212k18.5	67	47.742	ENSSPAG00000023009	sall2	56	70.270	Stegastes_partitus
ENSORLG00020008145	si:ch211-212k18.5	63	43.620	ENSTRUG00000024556	sall2	62	71.429	Takifugu_rubripes
ENSORLG00020008145	si:ch211-212k18.5	73	72.883	ENSTRUG00000025082	si:ch211-212k18.5	99	72.286	Takifugu_rubripes
ENSORLG00020008145	si:ch211-212k18.5	99	67.330	ENSXCOG00000000762	si:ch211-212k18.5	100	66.857	Xiphophorus_couchianus
ENSORLG00020008145	si:ch211-212k18.5	99	68.482	ENSXMAG00000001461	si:ch211-212k18.5	100	68.245	Xiphophorus_maculatus
ENSORLG00020008145	si:ch211-212k18.5	59	53.846	ENSXMAG00000000902	sall2	59	45.195	Xiphophorus_maculatus