EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020008323 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 36332 bases
Position: chr4:3944824-3981155
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020007461	MMR_HSR1	PF01926.23	5.6e-11	1	1
ENSORLP00020007495	MMR_HSR1	PF01926.23	5.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020002853	-	4125	-	ENSORLP00020007461	640 (aa)	-	-
ENSORLT00020002839	-	4125	-	ENSORLP00020007495	640 (aa)	-	-

Gene Model

Click here to download ENSORLG00020008323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020008323	-	52	32.515	ENSORLG00020012284	-	63	32.515
ENSORLG00020008323	-	64	31.651	ENSORLG00020017391	-	54	31.651
ENSORLG00020008323	-	56	34.921	ENSORLG00020006506	-	55	34.921
ENSORLG00020008323	-	63	35.266	ENSORLG00020012266	-	75	35.266
ENSORLG00020008323	-	60	38.220	ENSORLG00020015638	si:ch73-285p12.4	86	38.144
ENSORLG00020008323	-	72	40.851	ENSORLG00020011284	-	81	40.851
ENSORLG00020008323	-	58	35.354	ENSORLG00020017380	-	63	35.354
ENSORLG00020008323	-	57	35.359	ENSORLG00020017387	-	83	35.359
ENSORLG00020008323	-	56	37.569	ENSORLG00020017350	-	90	37.569
ENSORLG00020008323	-	78	98.171	ENSORLG00020008286	-	97	98.171
ENSORLG00020008323	-	60	34.359	ENSORLG00020006259	-	61	33.645
ENSORLG00020008323	-	71	33.043	ENSORLG00020021874	si:ch211-113e8.5	85	35.567
ENSORLG00020008323	-	67	33.990	ENSORLG00020009815	-	72	33.990
ENSORLG00020008323	-	75	36.325	ENSORLG00020016100	-	76	32.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020008323	-	65	37.991	ENSAPOG00000019154	-	61	37.991	Acanthochromis_polyacanthus
ENSORLG00020008323	-	70	41.026	ENSAPOG00000006502	-	56	41.026	Acanthochromis_polyacanthus
ENSORLG00020008323	-	57	45.652	ENSACIG00000009811	-	78	45.652	Amphilophus_citrinellus
ENSORLG00020008323	-	55	37.853	ENSACIG00000007737	-	77	37.374	Amphilophus_citrinellus
ENSORLG00020008323	-	59	42.781	ENSACIG00000007725	-	73	42.781	Amphilophus_citrinellus
ENSORLG00020008323	-	63	38.122	ENSAOCG00000003425	-	86	38.122	Amphiprion_ocellaris
ENSORLG00020008323	-	96	57.869	ENSAOCG00000004579	-	99	57.869	Amphiprion_ocellaris
ENSORLG00020008323	-	95	58.086	ENSAPEG00000014403	-	100	58.086	Amphiprion_percula
ENSORLG00020008323	-	65	41.148	ENSAPEG00000001491	-	73	41.148	Amphiprion_percula
ENSORLG00020008323	-	95	55.921	ENSATEG00000015654	-	96	55.921	Anabas_testudineus
ENSORLG00020008323	-	63	41.818	ENSATEG00000023053	-	97	41.818	Anabas_testudineus
ENSORLG00020008323	-	95	58.075	ENSACLG00000014795	-	97	58.075	Astatotilapia_calliptera
ENSORLG00020008323	-	72	45.729	ENSAMXG00000021387	-	75	45.729	Astyanax_mexicanus
ENSORLG00020008323	-	71	42.564	ENSAMXG00000033117	-	92	36.744	Astyanax_mexicanus
ENSORLG00020008323	-	72	38.542	ENSAMXG00000019109	-	99	38.542	Astyanax_mexicanus
ENSORLG00020008323	-	66	42.623	ENSAMXG00000030744	-	91	42.689	Astyanax_mexicanus
ENSORLG00020008323	-	72	42.714	ENSAMXG00000006064	-	87	42.714	Astyanax_mexicanus
ENSORLG00020008323	-	55	42.222	ENSAMXG00000009216	-	88	42.222	Astyanax_mexicanus
ENSORLG00020008323	-	54	41.111	ENSAMXG00000026085	-	84	37.615	Astyanax_mexicanus
ENSORLG00020008323	-	66	39.953	ENSCSEG00000021519	-	85	37.709	Cynoglossus_semilaevis
ENSORLG00020008323	-	66	40.476	ENSCVAG00000012268	-	96	40.476	Cyprinodon_variegatus
ENSORLG00020008323	-	64	40.104	ENSCVAG00000005778	-	80	40.104	Cyprinodon_variegatus
ENSORLG00020008323	-	65	44.700	ENSCVAG00000003054	-	83	44.700	Cyprinodon_variegatus
ENSORLG00020008323	-	67	40.957	ENSDARG00000063481	si:ch211-214j24.15	67	40.957	Danio_rerio
ENSORLG00020008323	-	65	40.724	ENSDARG00000102683	CR626941.1	87	40.724	Danio_rerio
ENSORLG00020008323	-	63	49.751	ENSELUG00000018192	-	99	49.751	Esox_lucius
ENSORLG00020008323	-	63	33.816	ENSELUG00000003217	-	86	33.816	Esox_lucius
ENSORLG00020008323	-	58	51.872	ENSELUG00000024502	-	70	51.872	Esox_lucius
ENSORLG00020008323	-	62	39.062	ENSELUG00000018709	-	78	35.433	Esox_lucius
ENSORLG00020008323	-	62	43.646	ENSFHEG00000023334	-	87	43.646	Fundulus_heteroclitus
ENSORLG00020008323	-	73	38.220	ENSFHEG00000020783	-	99	38.220	Fundulus_heteroclitus
ENSORLG00020008323	-	57	43.617	ENSGMOG00000001626	-	100	44.000	Gadus_morhua
ENSORLG00020008323	-	71	38.889	ENSGAFG00000020826	-	97	38.889	Gambusia_affinis
ENSORLG00020008323	-	66	38.263	ENSHBUG00000008326	-	100	38.263	Haplochromis_burtoni
ENSORLG00020008323	-	62	46.114	ENSHBUG00000016284	-	98	46.114	Haplochromis_burtoni
ENSORLG00020008323	-	71	36.632	ENSHBUG00000001242	-	67	36.632	Haplochromis_burtoni
ENSORLG00020008323	-	59	37.745	ENSIPUG00000013342	-	74	37.745	Ictalurus_punctatus
ENSORLG00020008323	-	64	45.000	ENSKMAG00000014764	-	100	45.000	Kryptolebias_marmoratus
ENSORLG00020008323	-	67	42.246	ENSKMAG00000014605	-	77	42.246	Kryptolebias_marmoratus
ENSORLG00020008323	-	57	46.409	ENSKMAG00000009600	-	84	43.284	Kryptolebias_marmoratus
ENSORLG00020008323	-	95	56.109	ENSKMAG00000004774	-	98	56.109	Kryptolebias_marmoratus
ENSORLG00020008323	-	73	55.365	ENSLBEG00000019652	-	85	55.844	Labrus_bergylta
ENSORLG00020008323	-	63	46.354	ENSLOCG00000012075	-	95	46.354	Lepisosteus_oculatus
ENSORLG00020008323	-	62	46.078	ENSLOCG00000000082	-	92	45.755	Lepisosteus_oculatus
ENSORLG00020008323	-	63	46.698	ENSLOCG00000018072	-	99	45.259	Lepisosteus_oculatus
ENSORLG00020008323	-	87	39.615	ENSLOCG00000016496	-	92	39.615	Lepisosteus_oculatus
ENSORLG00020008323	-	62	46.860	ENSLOCG00000000517	-	88	40.996	Lepisosteus_oculatus
ENSORLG00020008323	-	58	47.368	ENSLOCG00000017852	-	72	47.368	Lepisosteus_oculatus
ENSORLG00020008323	-	60	43.750	ENSLOCG00000000385	-	86	41.629	Lepisosteus_oculatus
ENSORLG00020008323	-	69	41.892	ENSMAMG00000021970	-	98	41.892	Mastacembelus_armatus
ENSORLG00020008323	-	66	42.632	ENSMAMG00000021969	-	59	43.316	Mastacembelus_armatus
ENSORLG00020008323	-	96	57.050	ENSMAMG00000015600	-	98	56.683	Mastacembelus_armatus
ENSORLG00020008323	-	57	42.162	ENSMMOG00000012876	-	58	42.162	Mola_mola
ENSORLG00020008323	-	73	31.837	ENSMMOG00000016860	-	88	31.837	Mola_mola
ENSORLG00020008323	-	62	38.503	ENSMMOG00000016864	-	86	38.503	Mola_mola
ENSORLG00020008323	-	72	63.563	ENSNBRG00000002136	-	86	63.563	Neolamprologus_brichardi
ENSORLG00020008323	-	99	92.056	ENSORLG00000028011	-	98	92.056	Oryzias_latipes
ENSORLG00020008323	-	96	98.537	ENSORLG00000002031	-	97	98.537	Oryzias_latipes
ENSORLG00020008323	-	72	38.593	ENSORLG00000002537	-	69	38.593	Oryzias_latipes
ENSORLG00020008323	-	99	97.165	ENSORLG00015004522	-	97	97.165	Oryzias_latipes_hsok
ENSORLG00020008323	-	54	36.364	ENSORLG00015023234	-	92	36.364	Oryzias_latipes_hsok
ENSORLG00020008323	-	66	40.559	ENSORLG00015004110	-	69	40.559	Oryzias_latipes_hsok
ENSORLG00020008323	-	66	40.326	ENSOMEG00000020433	-	90	39.103	Oryzias_melastigma
ENSORLG00020008323	-	88	73.435	ENSOMEG00000010594	-	97	73.435	Oryzias_melastigma
ENSORLG00020008323	-	65	51.562	ENSPKIG00000017688	-	82	51.562	Paramormyrops_kingsleyae
ENSORLG00020008323	-	60	51.282	ENSPKIG00000017193	-	87	51.282	Paramormyrops_kingsleyae
ENSORLG00020008323	-	56	39.785	ENSPMGG00000017993	-	76	39.785	Periophthalmus_magnuspinnatus
ENSORLG00020008323	-	62	37.915	ENSPMGG00000014056	-	83	37.915	Periophthalmus_magnuspinnatus
ENSORLG00020008323	-	61	43.850	ENSPMGG00000014055	-	88	43.850	Periophthalmus_magnuspinnatus
ENSORLG00020008323	-	58	40.000	ENSPFOG00000022479	-	84	40.000	Poecilia_formosa
ENSORLG00020008323	-	73	61.327	ENSPFOG00000016787	-	98	61.327	Poecilia_formosa
ENSORLG00020008323	-	58	42.623	ENSPFOG00000005689	si:dkey-185m8.2	70	42.623	Poecilia_formosa
ENSORLG00020008323	-	65	37.968	ENSPFOG00000006124	-	98	37.968	Poecilia_formosa
ENSORLG00020008323	-	69	40.230	ENSPFOG00000022853	-	98	40.230	Poecilia_formosa
ENSORLG00020008323	-	71	45.455	ENSPFOG00000015865	-	96	45.455	Poecilia_formosa
ENSORLG00020008323	-	81	41.270	ENSPFOG00000012732	-	90	41.270	Poecilia_formosa
ENSORLG00020008323	-	67	41.686	ENSPFOG00000013109	-	93	41.686	Poecilia_formosa
ENSORLG00020008323	-	80	40.275	ENSPFOG00000013349	-	93	40.275	Poecilia_formosa
ENSORLG00020008323	-	66	38.161	ENSPFOG00000015871	-	85	38.161	Poecilia_formosa
ENSORLG00020008323	-	77	40.503	ENSPFOG00000015875	-	96	40.503	Poecilia_formosa
ENSORLG00020008323	-	71	45.263	ENSPFOG00000000191	-	78	45.263	Poecilia_formosa
ENSORLG00020008323	-	64	35.776	ENSPLAG00000018692	-	97	36.207	Poecilia_latipinna
ENSORLG00020008323	-	67	40.845	ENSPLAG00000020776	-	91	40.845	Poecilia_latipinna
ENSORLG00020008323	-	66	46.114	ENSPLAG00000003020	-	82	46.114	Poecilia_latipinna
ENSORLG00020008323	-	55	38.889	ENSPLAG00000018911	-	67	38.889	Poecilia_latipinna
ENSORLG00020008323	-	64	58.636	ENSPLAG00000018606	-	86	58.636	Poecilia_latipinna
ENSORLG00020008323	-	67	37.566	ENSPLAG00000018664	-	89	37.566	Poecilia_latipinna
ENSORLG00020008323	-	64	44.681	ENSPMEG00000020297	-	100	44.681	Poecilia_mexicana
ENSORLG00020008323	-	50	42.262	ENSPMEG00000010605	-	67	42.262	Poecilia_mexicana
ENSORLG00020008323	-	68	39.583	ENSPMEG00000006334	-	82	39.583	Poecilia_mexicana
ENSORLG00020008323	-	79	39.303	ENSPMEG00000005912	-	88	39.303	Poecilia_mexicana
ENSORLG00020008323	-	95	55.848	ENSPMEG00000000604	-	98	56.013	Poecilia_mexicana
ENSORLG00020008323	-	72	36.652	ENSPMEG00000000724	-	83	36.652	Poecilia_mexicana
ENSORLG00020008323	-	55	38.889	ENSPMEG00000018950	-	67	38.889	Poecilia_mexicana
ENSORLG00020008323	-	79	36.400	ENSPREG00000001530	-	85	36.400	Poecilia_reticulata
ENSORLG00020008323	-	59	45.833	ENSPREG00000001250	-	79	45.833	Poecilia_reticulata
ENSORLG00020008323	-	94	55.848	ENSPREG00000020440	-	97	55.848	Poecilia_reticulata
ENSORLG00020008323	-	70	55.411	ENSPNYG00000010004	-	86	55.411	Pundamilia_nyererei
ENSORLG00020008323	-	61	40.191	ENSPNAG00000019899	-	83	40.191	Pygocentrus_nattereri
ENSORLG00020008323	-	80	36.590	ENSPNAG00000013132	-	85	36.590	Pygocentrus_nattereri
ENSORLG00020008323	-	77	43.590	ENSPNAG00000014932	-	81	43.590	Pygocentrus_nattereri
ENSORLG00020008323	-	56	40.513	ENSPNAG00000025850	-	79	40.102	Pygocentrus_nattereri
ENSORLG00020008323	-	64	49.206	ENSPNAG00000002097	-	93	49.206	Pygocentrus_nattereri
ENSORLG00020008323	-	59	41.579	ENSSFOG00015002507	-	75	41.579	Scleropages_formosus
ENSORLG00020008323	-	59	36.923	ENSSFOG00015002503	-	76	36.923	Scleropages_formosus
ENSORLG00020008323	-	60	42.328	ENSSFOG00015002420	-	78	42.328	Scleropages_formosus
ENSORLG00020008323	-	66	37.705	ENSSMAG00000012187	-	70	37.705	Scophthalmus_maximus
ENSORLG00020008323	-	66	41.053	ENSSDUG00000022299	-	92	41.053	Seriola_dumerili
ENSORLG00020008323	-	73	64.035	ENSSLDG00000010531	-	96	64.035	Seriola_lalandi_dorsalis
ENSORLG00020008323	-	66	67.662	ENSSLDG00000009168	-	99	64.912	Seriola_lalandi_dorsalis
ENSORLG00020008323	-	72	38.679	ENSSLDG00000005786	-	67	38.679	Seriola_lalandi_dorsalis
ENSORLG00020008323	-	71	38.843	ENSSPAG00000017616	-	91	38.843	Stegastes_partitus
ENSORLG00020008323	-	73	66.667	ENSSPAG00000015927	-	91	66.667	Stegastes_partitus
ENSORLG00020008323	-	63	40.860	ENSTRUG00000018070	-	77	40.957	Takifugu_rubripes
ENSORLG00020008323	-	65	39.419	ENSTRUG00000020422	-	83	39.419	Takifugu_rubripes
ENSORLG00020008323	-	64	41.935	ENSTNIG00000004275	-	96	41.935	Tetraodon_nigroviridis
ENSORLG00020008323	-	62	44.103	ENSTNIG00000004220	-	85	44.103	Tetraodon_nigroviridis
ENSORLG00020008323	-	62	44.920	ENSXCOG00000018421	-	97	44.920	Xiphophorus_couchianus
ENSORLG00020008323	-	58	41.398	ENSXCOG00000009005	-	90	40.000	Xiphophorus_couchianus
ENSORLG00020008323	-	66	39.220	ENSXMAG00000023360	-	83	39.220	Xiphophorus_maculatus