EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020008333 (Gene tree)
Gene ID: -
Gene Symbol: rab18a
Alias: -
Full Name: RAB18A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 10672 bases
Position: chr20:6818809-6829480
Accession: ZDB-GENE-030131-3980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020026072	MMR_HSR1	PF01926.23	8.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020002830	-	1910	-	ENSORLP00020026064	215 (aa)	-	-
ENSORLT00020002816	-	1877	-	ENSORLP00020026072	204 (aa)	-	-

Gene Model

Click here to download ENSORLG00020008333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020008333	rab18a	81	31.325	ENSORLG00020008129	hras	87	31.325
ENSORLG00020008333	rab18a	84	50.867	ENSORLG00020015288	rab30	84	50.867
ENSORLG00020008333	rab18a	77	30.864	ENSORLG00020005150	rhebl1	85	31.646
ENSORLG00020008333	rab18a	89	32.787	ENSORLG00020011620	rras2	81	36.552
ENSORLG00020008333	rab18a	79	32.530	ENSORLG00020006790	dnajc27	61	32.530
ENSORLG00020008333	rab18a	80	38.095	ENSORLG00020008512	-	84	38.095
ENSORLG00020008333	rab18a	82	35.294	ENSORLG00020012306	si:ch73-116o1.2	81	35.294
ENSORLG00020008333	rab18a	80	43.030	ENSORLG00020004905	RAB15	79	43.030
ENSORLG00020008333	rab18a	78	31.515	ENSORLG00020010114	-	87	31.056
ENSORLG00020008333	rab18a	77	32.716	ENSORLG00020002801	rheb	84	32.716
ENSORLG00020008333	rab18a	90	41.270	ENSORLG00020020922	rab5aa	86	41.270
ENSORLG00020008333	rab18a	95	36.318	ENSORLG00020001816	rab6a	88	38.547
ENSORLG00020008333	rab18a	83	44.444	ENSORLG00020000867	si:dkey-16l2.16	80	44.444
ENSORLG00020008333	rab18a	85	32.386	ENSORLG00020010041	rab34a	66	32.386
ENSORLG00020008333	rab18a	80	39.286	ENSORLG00020009158	rab9b	80	38.690
ENSORLG00020008333	rab18a	79	35.329	ENSORLG00020005240	RAB29	82	35.329
ENSORLG00020008333	rab18a	80	38.323	ENSORLG00020005952	rab7a	81	38.323
ENSORLG00020008333	rab18a	83	39.766	ENSORLG00020013337	rab6bb	80	39.766
ENSORLG00020008333	rab18a	72	42.105	ENSORLG00020013870	-	63	42.105
ENSORLG00020008333	rab18a	84	36.047	ENSORLG00020020220	rab23	75	37.013
ENSORLG00020008333	rab18a	79	37.349	ENSORLG00020000483	rab9a	83	37.349
ENSORLG00020008333	rab18a	93	36.923	ENSORLG00020012685	zgc:101559	63	42.177
ENSORLG00020008333	rab18a	88	42.222	ENSORLG00020008388	rab5c	82	42.222
ENSORLG00020008333	rab18a	94	40.609	ENSORLG00020015717	-	69	44.118
ENSORLG00020008333	rab18a	83	38.764	ENSORLG00020010772	rab6ba	81	38.764
ENSORLG00020008333	rab18a	93	35.417	ENSORLG00020019465	si:dkey-13a21.4	94	35.417
ENSORLG00020008333	rab18a	84	38.728	ENSORLG00020019269	RAB39B	81	38.728
ENSORLG00020008333	rab18a	80	43.902	ENSORLG00020020277	si:dkey-34d22.5	75	43.902
ENSORLG00020008333	rab18a	80	45.122	ENSORLG00020021663	rab3db	77	43.860
ENSORLG00020008333	rab18a	96	41.837	ENSORLG00020013747	rab11al	78	44.379
ENSORLG00020008333	rab18a	81	42.169	ENSORLG00020013719	rab25b	81	43.125
ENSORLG00020008333	rab18a	89	31.053	ENSORLG00020016139	rab34b	70	31.053
ENSORLG00020008333	rab18a	79	45.679	ENSORLG00020020844	RAB11B	74	45.679
ENSORLG00020008333	rab18a	79	50.617	ENSORLG00020021697	-	80	50.617
ENSORLG00020008333	rab18a	79	32.317	ENSORLG00020005258	rerg	81	32.317
ENSORLG00020008333	rab18a	82	44.048	ENSORLG00020018259	rab15	77	44.048
ENSORLG00020008333	rab18a	89	31.522	ENSORLG00020020961	kras	97	31.522
ENSORLG00020008333	rab18a	95	46.154	ENSORLG00020000892	rab1ab	80	50.617
ENSORLG00020008333	rab18a	91	37.000	ENSORLG00020018196	rab33ba	63	42.177
ENSORLG00020008333	rab18a	79	47.561	ENSORLG00020005131	rab12	70	47.561
ENSORLG00020008333	rab18a	79	45.679	ENSORLG00020020816	rab11ba	75	45.122
ENSORLG00020008333	rab18a	82	41.420	ENSORLG00020020811	rab25a	55	41.420
ENSORLG00020008333	rab18a	79	50.000	ENSORLG00020021071	zgc:171927	85	47.514
ENSORLG00020008333	rab18a	80	48.780	ENSORLG00020018986	rab14	76	44.937
ENSORLG00020008333	rab18a	81	44.910	ENSORLG00020019393	rab11bb	76	44.910
ENSORLG00020008333	rab18a	83	39.181	ENSORLG00020000604	rab41	79	38.728
ENSORLG00020008333	rab18a	88	44.809	ENSORLG00020009535	-	90	44.809
ENSORLG00020008333	rab18a	71	42.177	ENSORLG00020020266	rab33a	53	42.177
ENSORLG00020008333	rab18a	99	84.314	ENSORLG00020011590	rab18b	93	85.340
ENSORLG00020008333	rab18a	80	39.394	ENSORLG00020013895	rab42a	76	39.394
ENSORLG00020008333	rab18a	95	44.231	ENSORLG00020020035	rab2a	85	47.283
ENSORLG00020008333	rab18a	86	36.313	ENSORLG00020001721	rabl2	77	36.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020008333	rab18a	100	96.078	ENSAPOG00000010760	rab18a	94	96.354	Acanthochromis_polyacanthus
ENSORLG00020008333	rab18a	100	85.784	ENSACIG00000009617	rab18a	100	85.784	Amphilophus_citrinellus
ENSORLG00020008333	rab18a	100	96.569	ENSAOCG00000016233	rab18a	100	96.569	Amphiprion_ocellaris
ENSORLG00020008333	rab18a	100	96.569	ENSAPEG00000005392	rab18a	100	96.569	Amphiprion_percula
ENSORLG00020008333	rab18a	100	94.608	ENSATEG00000021911	rab18a	94	94.792	Anabas_testudineus
ENSORLG00020008333	rab18a	100	85.854	ENSACAG00000005463	-	94	87.565	Anolis_carolinensis
ENSORLG00020008333	rab18a	100	97.059	ENSACLG00000011484	rab18a	100	97.059	Astatotilapia_calliptera
ENSORLG00020008333	rab18a	96	68.657	ENSCPBG00000027619	-	89	71.667	Chrysemys_picta_bellii
ENSORLG00020008333	rab18a	100	84.466	ENSCPBG00000015839	-	93	86.911	Chrysemys_picta_bellii
ENSORLG00020008333	rab18a	97	73.367	ENSCING00000006838	-	90	77.778	Ciona_intestinalis
ENSORLG00020008333	rab18a	97	72.362	ENSCSAVG00000010348	-	97	73.057	Ciona_savignyi
ENSORLG00020008333	rab18a	100	94.608	ENSCSEG00000011816	rab18a	94	94.792	Cynoglossus_semilaevis
ENSORLG00020008333	rab18a	96	95.918	ENSCVAG00000015451	rab18a	96	95.918	Cyprinodon_variegatus
ENSORLG00020008333	rab18a	100	80.000	ENSDARG00000055291	rab18a	92	83.069	Danio_rerio
ENSORLG00020008333	rab18a	100	90.732	ENSELUG00000003805	rab18a	93	91.099	Esox_lucius
ENSORLG00020008333	rab18a	100	97.059	ENSFHEG00000019455	rab18a	100	97.059	Fundulus_heteroclitus
ENSORLG00020008333	rab18a	94	96.335	ENSGAFG00000002790	rab18a	94	96.354	Gambusia_affinis
ENSORLG00020008333	rab18a	100	84.466	ENSGAGG00000015642	-	93	86.911	Gopherus_agassizii
ENSORLG00020008333	rab18a	100	97.059	ENSHBUG00000001518	rab18a	100	97.059	Haplochromis_burtoni
ENSORLG00020008333	rab18a	99	95.567	ENSLBEG00000005861	rab18a	90	95.833	Labrus_bergylta
ENSORLG00020008333	rab18a	93	87.895	ENSLACG00000009310	rab18a	92	87.895	Latimeria_chalumnae
ENSORLG00020008333	rab18a	100	88.293	ENSLOCG00000007491	rab18a	93	88.482	Lepisosteus_oculatus
ENSORLG00020008333	rab18a	100	93.627	ENSMAMG00000014320	rab18a	94	93.750	Mastacembelus_armatus
ENSORLG00020008333	rab18a	100	96.569	ENSMZEG00005017235	rab18a	100	96.569	Maylandia_zebra
ENSORLG00020008333	rab18a	100	95.098	ENSMALG00000009813	rab18a	94	95.312	Monopterus_albus
ENSORLG00020008333	rab18a	100	97.059	ENSNBRG00000013507	rab18a	100	97.059	Neolamprologus_brichardi
ENSORLG00020008333	rab18a	100	99.510	ENSORLG00000004624	rab18a	100	99.510	Oryzias_latipes
ENSORLG00020008333	rab18a	100	99.020	ENSORLG00015004739	rab18a	100	99.020	Oryzias_latipes_hsok
ENSORLG00020008333	rab18a	100	99.020	ENSOMEG00000020605	rab18a	100	99.020	Oryzias_melastigma
ENSORLG00020008333	rab18a	100	86.829	ENSPKIG00000009825	rab18a	92	89.947	Paramormyrops_kingsleyae
ENSORLG00020008333	rab18a	100	93.137	ENSPMGG00000020409	-	94	93.750	Periophthalmus_magnuspinnatus
ENSORLG00020008333	rab18a	94	96.859	ENSPFOG00000007571	rab18a	94	96.875	Poecilia_formosa
ENSORLG00020008333	rab18a	94	96.859	ENSPLAG00000010104	rab18a	94	96.875	Poecilia_latipinna
ENSORLG00020008333	rab18a	94	96.859	ENSPMEG00000013085	rab18a	94	96.875	Poecilia_mexicana
ENSORLG00020008333	rab18a	94	96.859	ENSPREG00000005923	rab18a	78	96.875	Poecilia_reticulata
ENSORLG00020008333	rab18a	100	97.059	ENSPNYG00000007064	rab18a	100	97.059	Pundamilia_nyererei
ENSORLG00020008333	rab18a	99	80.597	ENSPNAG00000011548	rab18a	95	83.158	Pygocentrus_nattereri
ENSORLG00020008333	rab18a	100	90.244	ENSSFOG00015017444	rab18a	78	91.053	Scleropages_formosus
ENSORLG00020008333	rab18a	94	93.782	ENSSMAG00000002969	rab18a	94	93.782	Scophthalmus_maximus
ENSORLG00020008333	rab18a	100	95.588	ENSSDUG00000003823	rab18a	100	95.588	Seriola_dumerili
ENSORLG00020008333	rab18a	100	95.588	ENSSLDG00000006977	rab18a	100	95.588	Seriola_lalandi_dorsalis
ENSORLG00020008333	rab18a	93	88.360	ENSSPUG00000017677	-	92	87.895	Sphenodon_punctatus
ENSORLG00020008333	rab18a	100	91.667	ENSTRUG00000004984	rab18a	94	91.667	Takifugu_rubripes
ENSORLG00020008333	rab18a	100	86.893	ENSUMAG00000015574	-	91	89.894	Ursus_maritimus
ENSORLG00020008333	rab18a	100	86.408	ENSXETG00000004556	rab18	93	88.542	Xenopus_tropicalis
ENSORLG00020008333	rab18a	94	96.859	ENSXMAG00000024122	rab18a	94	96.875	Xiphophorus_maculatus