EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020008387 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 30505 bases
Position: chr18:15820925-15851429
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020026076	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020002798	-	3345	-	ENSORLP00020026076	1114 (aa)	-	-

Gene Model

Click here to download ENSORLG00020008387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020008387	chd3	94	64.779	ENSORLG00020004891	-	54	66.017
ENSORLG00020008387	chd3	90	74.902	ENSORLG00020011739	-	64	74.441
ENSORLG00020008387	chd3	74	76.499	ENSORLG00020006529	chd4a	54	68.297
ENSORLG00020008387	chd3	58	43.419	ENSORLG00020021891	chd6	88	43.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020008387	chd3	95	73.786	ENSG00000170004	CHD3	99	63.258	Homo_sapiens
ENSORLG00020008387	chd3	86	94.378	ENSAPOG00000005614	chd3	55	98.734	Acanthochromis_polyacanthus
ENSORLG00020008387	chd3	86	90.258	ENSACIG00000019671	chd3	64	90.258	Amphilophus_citrinellus
ENSORLG00020008387	chd3	95	88.889	ENSAOCG00000023784	chd3	63	88.944	Amphiprion_ocellaris
ENSORLG00020008387	chd3	95	88.711	ENSAPEG00000006341	chd3	55	87.556	Amphiprion_percula
ENSORLG00020008387	chd3	76	92.051	ENSATEG00000000848	chd3	61	84.143	Anabas_testudineus
ENSORLG00020008387	chd3	95	75.312	ENSACAG00000004276	CHD3	54	74.955	Anolis_carolinensis
ENSORLG00020008387	chd3	90	74.953	ENSANAG00000034323	CHD3	57	75.233	Aotus_nancymaae
ENSORLG00020008387	chd3	95	90.019	ENSACLG00000009222	chd3	90	90.301	Astatotilapia_calliptera
ENSORLG00020008387	chd3	95	73.605	ENSBTAG00000014377	CHD3	57	73.074	Bos_taurus
ENSORLG00020008387	chd3	95	73.698	ENSCJAG00000014766	CHD3	57	72.840	Callithrix_jacchus
ENSORLG00020008387	chd3	95	73.498	ENSCAFG00000016859	CHD3	56	73.233	Canis_familiaris
ENSORLG00020008387	chd3	90	75.721	ENSCAFG00020007422	CHD3	58	75.349	Canis_lupus_dingo
ENSORLG00020008387	chd3	95	73.522	ENSCHIG00000016737	CHD3	57	72.639	Capra_hircus
ENSORLG00020008387	chd3	95	73.786	ENSTSYG00000035658	CHD3	57	73.016	Carlito_syrichta
ENSORLG00020008387	chd3	95	69.373	ENSCAPG00000014864	CHD3	55	68.314	Cavia_aperea
ENSORLG00020008387	chd3	95	73.522	ENSCPOG00000022653	CHD3	56	72.374	Cavia_porcellus
ENSORLG00020008387	chd3	95	73.786	ENSCCAG00000034792	CHD3	56	73.016	Cebus_capucinus
ENSORLG00020008387	chd3	95	73.698	ENSCATG00000041717	CHD3	57	72.840	Cercocebus_atys
ENSORLG00020008387	chd3	95	73.522	ENSCLAG00000010523	CHD3	58	73.080	Chinchilla_lanigera
ENSORLG00020008387	chd3	95	73.871	ENSCSAG00000011122	CHD3	57	73.186	Chlorocebus_sabaeus
ENSORLG00020008387	chd3	94	77.122	ENSCPBG00000011966	CHD3	97	75.619	Chrysemys_picta_bellii
ENSORLG00020008387	chd3	95	73.698	ENSCANG00000037641	CHD3	56	75.315	Colobus_angolensis_palliatus
ENSORLG00020008387	chd3	95	72.639	ENSCGRG00001011306	Chd3	58	72.727	Cricetulus_griseus_chok1gshd
ENSORLG00020008387	chd3	95	71.481	ENSCGRG00000007878	Chd3	53	82.118	Cricetulus_griseus_crigri
ENSORLG00020008387	chd3	92	92.614	ENSCSEG00000004489	chd3	62	85.103	Cynoglossus_semilaevis
ENSORLG00020008387	chd3	94	87.884	ENSCVAG00000007293	chd3	61	87.251	Cyprinodon_variegatus
ENSORLG00020008387	chd3	95	83.424	ENSDARG00000021405	chd3	50	94.286	Danio_rerio
ENSORLG00020008387	chd3	95	73.522	ENSDORG00000010713	Chd3	58	72.992	Dipodomys_ordii
ENSORLG00020008387	chd3	86	75.845	ENSEASG00005019360	CHD3	56	75.362	Equus_asinus_asinus
ENSORLG00020008387	chd3	86	75.845	ENSECAG00000010051	CHD3	56	75.266	Equus_caballus
ENSORLG00020008387	chd3	95	67.608	ENSEEUG00000015205	CHD3	57	66.990	Erinaceus_europaeus
ENSORLG00020008387	chd3	86	79.943	ENSELUG00000019499	chd3	66	80.962	Esox_lucius
ENSORLG00020008387	chd3	95	73.786	ENSFCAG00000009629	CHD3	55	73.169	Felis_catus
ENSORLG00020008387	chd3	90	75.907	ENSFDAG00000008220	CHD3	54	75.442	Fukomys_damarensis
ENSORLG00020008387	chd3	82	85.251	ENSGMOG00000013599	chd3	50	86.224	Gadus_morhua
ENSORLG00020008387	chd3	76	90.426	ENSGAFG00000004055	chd3	95	86.368	Gambusia_affinis
ENSORLG00020008387	chd3	88	88.330	ENSGACG00000019275	chd3	52	87.542	Gasterosteus_aculeatus
ENSORLG00020008387	chd3	82	79.027	ENSGAGG00000013164	CHD3	63	80.534	Gopherus_agassizii
ENSORLG00020008387	chd3	95	73.698	ENSGGOG00000013496	CHD3	56	75.315	Gorilla_gorilla
ENSORLG00020008387	chd3	95	73.522	ENSHGLG00000012017	CHD3	57	73.080	Heterocephalus_glaber_female
ENSORLG00020008387	chd3	86	64.862	ENSHGLG00100013902	CHD3	61	63.435	Heterocephalus_glaber_male
ENSORLG00020008387	chd3	95	84.609	ENSHCOG00000010170	chd3	57	83.993	Hippocampus_comes
ENSORLG00020008387	chd3	87	84.080	ENSIPUG00000003271	chd3	59	84.538	Ictalurus_punctatus
ENSORLG00020008387	chd3	95	73.698	ENSSTOG00000025907	CHD3	58	72.992	Ictidomys_tridecemlineatus
ENSORLG00020008387	chd3	95	73.786	ENSJJAG00000017633	Chd3	58	72.992	Jaculus_jaculus
ENSORLG00020008387	chd3	95	85.081	ENSKMAG00000019292	chd3	61	84.358	Kryptolebias_marmoratus
ENSORLG00020008387	chd3	90	88.889	ENSLBEG00000028485	chd3	53	89.444	Labrus_bergylta
ENSORLG00020008387	chd3	95	73.563	ENSLACG00000008031	CHD3	57	73.475	Latimeria_chalumnae
ENSORLG00020008387	chd3	95	79.892	ENSLOCG00000013965	chd3	54	80.162	Lepisosteus_oculatus
ENSORLG00020008387	chd3	91	82.562	ENSLAFG00000000572	CHD3	55	82.325	Loxodonta_africana
ENSORLG00020008387	chd3	95	73.698	ENSMFAG00000020113	CHD3	57	75.315	Macaca_fascicularis
ENSORLG00020008387	chd3	95	73.698	ENSMMUG00000022221	CHD3	58	72.840	Macaca_mulatta
ENSORLG00020008387	chd3	95	73.698	ENSMNEG00000001728	CHD3	56	75.315	Macaca_nemestrina
ENSORLG00020008387	chd3	95	73.698	ENSMLEG00000032249	CHD3	57	72.840	Mandrillus_leucophaeus
ENSORLG00020008387	chd3	86	90.818	ENSMAMG00000000564	chd3	61	90.120	Mastacembelus_armatus
ENSORLG00020008387	chd3	95	72.551	ENSMAUG00000013873	Chd3	56	74.903	Mesocricetus_auratus
ENSORLG00020008387	chd3	95	73.786	ENSMICG00000008741	CHD3	55	73.104	Microcebus_murinus
ENSORLG00020008387	chd3	95	72.816	ENSMOCG00000004848	Chd3	59	72.904	Microtus_ochrogaster
ENSORLG00020008387	chd3	94	85.036	ENSMMOG00000012699	chd3	56	90.698	Mola_mola
ENSORLG00020008387	chd3	86	75.657	ENSMODG00000007509	CHD3	57	75.463	Monodelphis_domestica
ENSORLG00020008387	chd3	95	73.345	MGP_CAROLIEiJ_G0016564	Chd3	60	72.286	Mus_caroli
ENSORLG00020008387	chd3	95	73.257	ENSMUSG00000018474	Chd3	55	82.000	Mus_musculus
ENSORLG00020008387	chd3	95	73.587	MGP_PahariEiJ_G0017695	Chd3	60	72.968	Mus_pahari
ENSORLG00020008387	chd3	95	73.345	MGP_SPRETEiJ_G0017400	Chd3	60	72.286	Mus_spretus
ENSORLG00020008387	chd3	79	80.381	ENSMPUG00000008861	CHD3	50	82.222	Mustela_putorius_furo
ENSORLG00020008387	chd3	95	73.063	ENSMLUG00000014643	-	56	72.816	Myotis_lucifugus
ENSORLG00020008387	chd3	95	73.522	ENSNGAG00000000773	Chd3	56	72.904	Nannospalax_galili
ENSORLG00020008387	chd3	86	89.195	ENSNBRG00000000636	chd3	59	88.187	Neolamprologus_brichardi
ENSORLG00020008387	chd3	95	73.339	ENSNLEG00000009770	CHD3	59	72.222	Nomascus_leucogenys
ENSORLG00020008387	chd3	85	66.667	ENSMEUG00000005852	CHD3	53	66.667	Notamacropus_eugenii
ENSORLG00020008387	chd3	90	75.210	ENSOPRG00000011069	CHD3	57	74.278	Ochotona_princeps
ENSORLG00020008387	chd3	95	73.522	ENSODEG00000017785	CHD3	57	72.816	Octodon_degus
ENSORLG00020008387	chd3	95	88.506	ENSONIG00000009292	chd3	59	87.975	Oreochromis_niloticus
ENSORLG00020008387	chd3	95	72.527	ENSOCUG00000029299	CHD3	57	71.555	Oryctolagus_cuniculus
ENSORLG00020008387	chd3	94	87.558	ENSORLG00000007107	chd3	65	87.558	Oryzias_latipes
ENSORLG00020008387	chd3	86	92.247	ENSOMEG00000013691	chd3	61	92.247	Oryzias_melastigma
ENSORLG00020008387	chd3	95	73.786	ENSOGAG00000003216	CHD3	57	73.192	Otolemur_garnettii
ENSORLG00020008387	chd3	95	73.433	ENSPPAG00000032886	CHD3	56	75.121	Pan_paniscus
ENSORLG00020008387	chd3	95	73.786	ENSPPRG00000000626	CHD3	57	73.169	Panthera_pardus
ENSORLG00020008387	chd3	95	73.786	ENSPTRG00000008714	CHD3	56	75.411	Pan_troglodytes
ENSORLG00020008387	chd3	95	73.698	ENSPANG00000023938	CHD3	57	75.315	Papio_anubis
ENSORLG00020008387	chd3	89	94.398	ENSPKIG00000006305	chd3	57	94.398	Paramormyrops_kingsleyae
ENSORLG00020008387	chd3	76	81.072	ENSPSIG00000010177	CHD3	79	80.844	Pelodiscus_sinensis
ENSORLG00020008387	chd3	95	72.727	ENSPEMG00000014262	Chd3	57	72.816	Peromyscus_maniculatus_bairdii
ENSORLG00020008387	chd3	93	83.222	ENSPCIG00000005442	CHD3	60	76.099	Phascolarctos_cinereus
ENSORLG00020008387	chd3	76	91.359	ENSPFOG00000012464	chd3	53	86.388	Poecilia_formosa
ENSORLG00020008387	chd3	95	90.823	ENSPLAG00000002887	chd3	95	87.934	Poecilia_latipinna
ENSORLG00020008387	chd3	98	89.061	ENSPMEG00000016725	chd3	95	88.605	Poecilia_mexicana
ENSORLG00020008387	chd3	76	91.628	ENSPREG00000011044	chd3	60	87.996	Poecilia_reticulata
ENSORLG00020008387	chd3	95	72.261	ENSPPYG00000007940	CHD3	57	70.936	Pongo_abelii
ENSORLG00020008387	chd3	88	87.478	ENSPCAG00000004350	CHD3	54	87.478	Procavia_capensis
ENSORLG00020008387	chd3	95	73.786	ENSPCOG00000020952	CHD3	57	73.016	Propithecus_coquereli
ENSORLG00020008387	chd3	95	84.602	ENSPNAG00000020393	chd3	60	86.588	Pygocentrus_nattereri
ENSORLG00020008387	chd3	86	75.749	ENSRNOG00000009722	Chd3	56	75.556	Rattus_norvegicus
ENSORLG00020008387	chd3	95	73.982	ENSRBIG00000033562	CHD3	56	75.875	Rhinopithecus_bieti
ENSORLG00020008387	chd3	95	73.698	ENSRROG00000029554	CHD3	56	75.315	Rhinopithecus_roxellana
ENSORLG00020008387	chd3	95	73.786	ENSSBOG00000020719	CHD3	56	75.411	Saimiri_boliviensis_boliviensis
ENSORLG00020008387	chd3	95	73.428	ENSSHAG00000014412	CHD3	59	72.896	Sarcophilus_harrisii
ENSORLG00020008387	chd3	81	90.063	ENSSFOG00015023123	chd3	53	90.063	Scleropages_formosus
ENSORLG00020008387	chd3	86	89.044	ENSSMAG00000006451	chd3	61	88.347	Scophthalmus_maximus
ENSORLG00020008387	chd3	92	92.546	ENSSDUG00000005792	chd3	96	91.868	Seriola_dumerili
ENSORLG00020008387	chd3	95	88.800	ENSSPAG00000013694	chd3	64	90.448	Stegastes_partitus
ENSORLG00020008387	chd3	95	73.871	ENSSSCG00000021363	CHD3	60	75.752	Sus_scrofa
ENSORLG00020008387	chd3	94	86.104	ENSTRUG00000014990	chd3	67	85.162	Takifugu_rubripes
ENSORLG00020008387	chd3	94	84.484	ENSTNIG00000012998	chd3	58	83.556	Tetraodon_nigroviridis
ENSORLG00020008387	chd3	74	67.937	ENSTBEG00000011454	-	50	68.498	Tupaia_belangeri
ENSORLG00020008387	chd3	94	73.559	ENSUAMG00000005475	CHD3	56	80.332	Ursus_americanus
ENSORLG00020008387	chd3	95	73.498	ENSVVUG00000028011	CHD3	56	75.349	Vulpes_vulpes
ENSORLG00020008387	chd3	94	65.213	ENSXETG00000012991	chd3	52	66.321	Xenopus_tropicalis
ENSORLG00020008387	chd3	95	85.768	ENSXCOG00000000809	chd3	92	85.108	Xiphophorus_couchianus
ENSORLG00020008387	chd3	76	91.026	ENSXMAG00000016035	chd3	65	88.136	Xiphophorus_maculatus