EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020008388 (Gene tree)
Gene ID
-
Gene Symbol
rab5c
Alias
-
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Minus strand
Length
6865 bases
Position
chr8:5764822-5771686
Accession
ZDB-GENE-031118-30
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020026119MMR_HSR1PF01926.237.5e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020002734-3138-ENSORLP00020026119218 (aa)--
Gene Model
Click here to download ENSORLG00020008388's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008388's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020008388rab5c10083.945ENSORLG00020020922rab5aa10083.945
ENSORLG00020008388rab5c7736.905ENSORLG00020005131rab127037.423
ENSORLG00020008388rab5c7037.908ENSORLG00020001721rabl26637.908
ENSORLG00020008388rab5c7447.205ENSORLG00020020816rab11ba7447.205
ENSORLG00020008388rab5c9043.284ENSORLG00020020811rab25a6643.284
ENSORLG00020008388rab5c7843.750ENSORLG00020005952rab7a8543.750
ENSORLG00020008388rab5c7742.262ENSORLG00020020035rab2a7942.262
ENSORLG00020008388rab5c8235.602ENSORLG00020018196rab33ba8135.602
ENSORLG00020008388rab5c7743.114ENSORLG00020001816rab6a8443.114
ENSORLG00020008388rab5c6733.562ENSORLG00020005258rerg7233.562
ENSORLG00020008388rab5c5431.148ENSORLG00020004126arl8a6131.148
ENSORLG00020008388rab5c8636.364ENSORLG00020021663rab3db7538.788
ENSORLG00020008388rab5c7530.909ENSORLG00020010114-8930.909
ENSORLG00020008388rab5c8939.000ENSORLG00020010772rab6ba9139.000
ENSORLG00020008388rab5c8242.222ENSORLG00020008333rab18a8842.222
ENSORLG00020008388rab5c7439.130ENSORLG00020018259rab157639.130
ENSORLG00020008388rab5c7435.542ENSORLG00020008512-8235.542
ENSORLG00020008388rab5c5532.258ENSORLG00020002055arl8bb6332.258
ENSORLG00020008388rab5c7437.952ENSORLG00020020266rab33a6037.952
ENSORLG00020008388rab5c7235.000ENSORLG00020016139rab34b5935.000
ENSORLG00020008388rab5c7234.177ENSORLG00020020220rab237436.184
ENSORLG00020008388rab5c9433.971ENSORLG00020009158rab9b9833.971
ENSORLG00020008388rab5c8341.837ENSORLG00020011590rab18b9541.837
ENSORLG00020008388rab5c7639.181ENSORLG00020012685zgc:1015597339.181
ENSORLG00020008388rab5c9241.262ENSORLG00020013719rab25b9941.294
ENSORLG00020008388rab5c8944.898ENSORLG00020000892rab1ab9644.898
ENSORLG00020008388rab5c8142.614ENSORLG00020015288rab308742.614
ENSORLG00020008388rab5c8940.000ENSORLG00020021071zgc:1719279640.000
ENSORLG00020008388rab5c7633.735ENSORLG00020020961kras9233.333
ENSORLG00020008388rab5c7633.533ENSORLG00020013690zgc:555588933.533
ENSORLG00020008388rab5c8735.859ENSORLG00020020277si:dkey-34d22.58635.859
ENSORLG00020008388rab5c8937.113ENSORLG00020009535-9537.113
ENSORLG00020008388rab5c8042.529ENSORLG00020000604rab418241.379
ENSORLG00020008388rab5c6835.484ENSORLG00020013870-6435.484
ENSORLG00020008388rab5c7248.408ENSORLG00020013747rab11al7348.408
ENSORLG00020008388rab5c7032.468ENSORLG00020002801rheb8332.468
ENSORLG00020008388rab5c7335.583ENSORLG00020019465si:dkey-13a21.47935.583
ENSORLG00020008388rab5c8935.500ENSORLG00020000867si:dkey-16l2.169535.500
ENSORLG00020008388rab5c9240.670ENSORLG00020019393rab11bb9640.670
ENSORLG00020008388rab5c9140.909ENSORLG00020018986rab148740.909
ENSORLG00020008388rab5c7437.195ENSORLG00020013895rab42a7537.195
ENSORLG00020008388rab5c7430.061ENSORLG00020005150rhebl18830.061
ENSORLG00020008388rab5c5431.148ENSORLG00020021398arl8ba6231.148
ENSORLG00020008388rab5c7537.349ENSORLG00020019269RAB39B7837.349
ENSORLG00020008388rab5c7338.365ENSORLG00020004905RAB157638.365
ENSORLG00020008388rab5c7231.875ENSORLG00020010041rab34a6031.875
ENSORLG00020008388rab5c7433.533ENSORLG00020005240RAB298133.533
ENSORLG00020008388rab5c7734.857ENSORLG00020000483rab9a8534.857
ENSORLG00020008388rab5c9039.594ENSORLG00020013337rab6bb9339.594
ENSORLG00020008388rab5c8042.614ENSORLG00020015717-7242.614
ENSORLG00020008388rab5c8943.878ENSORLG00020021697-9643.878
ENSORLG00020008388rab5c6330.216ENSORLG00020011620rras28030.216
ENSORLG00020008388rab5c7446.584ENSORLG00020020844RAB11B7446.584
ENSORLG00020008388rab5c7631.737ENSORLG00020008129hras8731.737
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020008388rab5c10088.991ENSG00000108774RAB5C10095.604Homo_sapiens
ENSORLG00020008388rab5c9996.313ENSAPOG00000016864rab5c9996.313Acanthochromis_polyacanthus
ENSORLG00020008388rab5c10088.991ENSAMEG00000006003RAB5C10088.991Ailuropoda_melanoleuca
ENSORLG00020008388rab5c9996.313ENSACIG00000010896rab5c9996.313Amphilophus_citrinellus
ENSORLG00020008388rab5c9996.313ENSAOCG00000016614rab5c9996.313Amphiprion_ocellaris
ENSORLG00020008388rab5c9796.226ENSAPEG00000017868-9796.226Amphiprion_percula
ENSORLG00020008388rab5c10098.165ENSATEG00000001937rab5c10098.165Anabas_testudineus
ENSORLG00020008388rab5c9491.220ENSANAG00000025390RAB5C10091.220Aotus_nancymaae
ENSORLG00020008388rab5c9994.931ENSACLG00000002706rab5c9994.931Astatotilapia_calliptera
ENSORLG00020008388rab5c9689.048ENSACLG00000008615-9987.727Astatotilapia_calliptera
ENSORLG00020008388rab5c9996.330ENSAMXG00000043717rab5c9996.330Astyanax_mexicanus
ENSORLG00020008388rab5c9590.385ENSAMXG00000037267-9990.385Astyanax_mexicanus
ENSORLG00020008388rab5c10088.991ENSBTAG00000006982RAB5C10088.991Bos_taurus
ENSORLG00020008388rab5c9974.194WBGene00004268rab-59974.194Caenorhabditis_elegans
ENSORLG00020008388rab5c10088.991ENSCAFG00000015629RAB5C10088.991Canis_familiaris
ENSORLG00020008388rab5c10088.991ENSCAFG00020013537RAB5C10088.991Canis_lupus_dingo
ENSORLG00020008388rab5c10088.991ENSCHIG00000012960RAB5C10088.991Capra_hircus
ENSORLG00020008388rab5c10089.450ENSTSYG00000030531RAB5C10089.450Carlito_syrichta
ENSORLG00020008388rab5c10088.991ENSCCAG00000025940RAB5C10088.991Cebus_capucinus
ENSORLG00020008388rab5c10088.991ENSCATG00000040873RAB5C10088.991Cercocebus_atys
ENSORLG00020008388rab5c10088.532ENSCLAG00000016650RAB5C10088.532Chinchilla_lanigera
ENSORLG00020008388rab5c8293.820ENSCHOG00000009886RAB5C10093.820Choloepus_hoffmanni
ENSORLG00020008388rab5c10074.429ENSCING00000003340-9974.429Ciona_intestinalis
ENSORLG00020008388rab5c10075.330ENSCSAVG00000000613-9983.951Ciona_savignyi
ENSORLG00020008388rab5c10088.991ENSCGRG00001014226Rab5c10088.991Cricetulus_griseus_chok1gshd
ENSORLG00020008388rab5c10088.991ENSCGRG00000007534Rab5c10088.991Cricetulus_griseus_crigri
ENSORLG00020008388rab5c9994.470ENSCSEG00000017024rab5c9994.470Cynoglossus_semilaevis
ENSORLG00020008388rab5c9996.313ENSCVAG00000009550rab5c9996.313Cyprinodon_variegatus
ENSORLG00020008388rab5c10088.991ENSDNOG00000038853RAB5C10088.991Dasypus_novemcinctus
ENSORLG00020008388rab5c10089.908ENSDORG00000006819Rab5c10089.908Dipodomys_ordii
ENSORLG00020008388rab5c9176.768FBgn0014010Rab59076.768Drosophila_melanogaster
ENSORLG00020008388rab5c8585.484ENSEBUG00000014794rab5c8885.484Eptatretus_burgeri
ENSORLG00020008388rab5c10088.991ENSEASG00005009281RAB5C10088.991Equus_asinus_asinus
ENSORLG00020008388rab5c10089.450ENSECAG00000025054RAB5C10089.450Equus_caballus
ENSORLG00020008388rab5c10088.991ENSEEUG00000002790RAB5C10088.991Erinaceus_europaeus
ENSORLG00020008388rab5c9993.519ENSELUG00000018516rab5c9993.519Esox_lucius
ENSORLG00020008388rab5c9989.401ENSELUG00000010439-9989.401Esox_lucius
ENSORLG00020008388rab5c10088.991ENSFCAG00000002148RAB5C10088.991Felis_catus
ENSORLG00020008388rab5c10088.073ENSFDAG00000021541RAB5C10088.073Fukomys_damarensis
ENSORLG00020008388rab5c9989.908ENSFHEG00000015268-9989.908Fundulus_heteroclitus
ENSORLG00020008388rab5c9997.696ENSFHEG00000012117rab5c9997.696Fundulus_heteroclitus
ENSORLG00020008388rab5c7787.500ENSGMOG00000001876-9787.500Gadus_morhua
ENSORLG00020008388rab5c9995.392ENSGMOG00000015096rab5c9995.392Gadus_morhua
ENSORLG00020008388rab5c9996.774ENSGAFG00000000884rab5c9996.774Gambusia_affinis
ENSORLG00020008388rab5c9589.952ENSGAFG00000003642-9987.330Gambusia_affinis
ENSORLG00020008388rab5c9991.705ENSGACG00000008659rab5c9991.705Gasterosteus_aculeatus
ENSORLG00020008388rab5c10088.991ENSGGOG00000005472RAB5C10088.991Gorilla_gorilla
ENSORLG00020008388rab5c9689.048ENSHBUG00000006823-9987.727Haplochromis_burtoni
ENSORLG00020008388rab5c9994.931ENSHBUG00000002014rab5c9994.931Haplochromis_burtoni
ENSORLG00020008388rab5c10088.073ENSHGLG00000012067RAB5C10088.073Heterocephalus_glaber_female
ENSORLG00020008388rab5c9996.789ENSHCOG00000004662rab5c9796.789Hippocampus_comes
ENSORLG00020008388rab5c9779.245ENSHCOG00000020238-10078.733Hippocampus_comes
ENSORLG00020008388rab5c9295.000ENSIPUG00000020082rab5c9993.151Ictalurus_punctatus
ENSORLG00020008388rab5c10088.532ENSSTOG00000006620RAB5C10088.532Ictidomys_tridecemlineatus
ENSORLG00020008388rab5c10089.450ENSJJAG00000021181Rab5c10089.450Jaculus_jaculus
ENSORLG00020008388rab5c9990.367ENSKMAG00000017417-9990.367Kryptolebias_marmoratus
ENSORLG00020008388rab5c9998.157ENSKMAG00000020038rab5c9998.157Kryptolebias_marmoratus
ENSORLG00020008388rab5c10089.954ENSLBEG00000010408-9890.783Labrus_bergylta
ENSORLG00020008388rab5c9996.313ENSLBEG00000004128rab5c9996.313Labrus_bergylta
ENSORLG00020008388rab5c9992.130ENSLOCG00000012566rab5c10092.130Lepisosteus_oculatus
ENSORLG00020008388rab5c10088.991ENSMFAG00000039627RAB5C10088.991Macaca_fascicularis
ENSORLG00020008388rab5c10088.991ENSMNEG00000000355RAB5C10088.991Macaca_nemestrina
ENSORLG00020008388rab5c9996.313ENSMAMG00000022322rab5c9996.313Mastacembelus_armatus
ENSORLG00020008388rab5c9990.826ENSMAMG00000016207-9990.826Mastacembelus_armatus
ENSORLG00020008388rab5c9689.048ENSMZEG00005021090-9987.727Maylandia_zebra
ENSORLG00020008388rab5c9994.931ENSMZEG00005022735rab5c9994.931Maylandia_zebra
ENSORLG00020008388rab5c10089.450ENSMAUG00000015005Rab5c10089.450Mesocricetus_auratus
ENSORLG00020008388rab5c10089.450ENSMICG00000041608RAB5C10089.450Microcebus_murinus
ENSORLG00020008388rab5c10089.450ENSMOCG00000018531-10089.450Microtus_ochrogaster
ENSORLG00020008388rab5c10095.872ENSMMOG00000020621rab5c9995.872Mola_mola
ENSORLG00020008388rab5c9987.558ENSMALG00000022348-9987.558Monopterus_albus
ENSORLG00020008388rab5c9790.094ENSMALG00000006052rab5c9690.278Monopterus_albus
ENSORLG00020008388rab5c10089.450MGP_CAROLIEiJ_G0017184Rab5c10089.450Mus_caroli
ENSORLG00020008388rab5c10089.450ENSMUSG00000019173Rab5c10089.450Mus_musculus
ENSORLG00020008388rab5c10089.450MGP_PahariEiJ_G0018314Rab5c10089.450Mus_pahari
ENSORLG00020008388rab5c10089.450MGP_SPRETEiJ_G0018027Rab5c10089.450Mus_spretus
ENSORLG00020008388rab5c10088.991ENSMPUG00000010554RAB5C10088.991Mustela_putorius_furo
ENSORLG00020008388rab5c10088.991ENSNGAG00000010286Rab5c10088.991Nannospalax_galili
ENSORLG00020008388rab5c9689.048ENSNBRG00000016922-9987.727Neolamprologus_brichardi
ENSORLG00020008388rab5c9995.853ENSNBRG00000018165rab5c9995.853Neolamprologus_brichardi
ENSORLG00020008388rab5c8287.079ENSOPRG00000008255RAB5C10087.079Ochotona_princeps
ENSORLG00020008388rab5c10088.073ENSODEG00000017920RAB5C10088.073Octodon_degus
ENSORLG00020008388rab5c9995.392ENSONIG00000001113rab5c9995.392Oreochromis_niloticus
ENSORLG00020008388rab5c10099.541ENSORLG00000003882rab5c10099.541Oryzias_latipes
ENSORLG00020008388rab5c10099.541ENSORLG00015021900rab5c10099.541Oryzias_latipes_hsok
ENSORLG00020008388rab5c10099.541ENSOMEG00000023078rab5c10099.541Oryzias_melastigma
ENSORLG00020008388rab5c10089.450ENSOGAG00000009456RAB5C10089.450Otolemur_garnettii
ENSORLG00020008388rab5c10088.991ENSOARG00000018768RAB5C10088.991Ovis_aries
ENSORLG00020008388rab5c10088.991ENSPPAG00000037206RAB5C10088.991Pan_paniscus
ENSORLG00020008388rab5c10088.991ENSPPRG00000005745RAB5C10088.991Panthera_pardus
ENSORLG00020008388rab5c10088.991ENSPTIG00000008177RAB5C10088.991Panthera_tigris_altaica
ENSORLG00020008388rab5c10088.991ENSPTRG00000009194RAB5C10088.991Pan_troglodytes
ENSORLG00020008388rab5c9987.963ENSPKIG00000001237-9987.963Paramormyrops_kingsleyae
ENSORLG00020008388rab5c9988.426ENSPKIG00000020112-9988.426Paramormyrops_kingsleyae
ENSORLG00020008388rab5c9992.166ENSPMGG00000010792rab5c9893.868Periophthalmus_magnuspinnatus
ENSORLG00020008388rab5c10089.450ENSPEMG00000017971Rab5c10089.450Peromyscus_maniculatus_bairdii
ENSORLG00020008388rab5c9975.576ENSPMAG00000001399rab5c10075.576Petromyzon_marinus
ENSORLG00020008388rab5c10073.853ENSPMAG00000007867rab5c10073.853Petromyzon_marinus
ENSORLG00020008388rab5c9978.281ENSPMAG00000000008rab5c9978.281Petromyzon_marinus
ENSORLG00020008388rab5c10088.991ENSPCIG00000020225-10088.991Phascolarctos_cinereus
ENSORLG00020008388rab5c9996.774ENSPLAG00000004790rab5c9996.774Poecilia_latipinna
ENSORLG00020008388rab5c9988.991ENSPLAG00000016333-10088.991Poecilia_latipinna
ENSORLG00020008388rab5c9790.141ENSPMEG00000012614-9988.636Poecilia_mexicana
ENSORLG00020008388rab5c9996.774ENSPMEG00000011336rab5c9996.774Poecilia_mexicana
ENSORLG00020008388rab5c9996.774ENSPREG00000010146rab5c9996.774Poecilia_reticulata
ENSORLG00020008388rab5c8690.476ENSPREG00000022167-8991.803Poecilia_reticulata
ENSORLG00020008388rab5c10088.991ENSPPYG00000008398RAB5C10088.991Pongo_abelii
ENSORLG00020008388rab5c10088.073ENSPCAG00000016412RAB5C10088.073Procavia_capensis
ENSORLG00020008388rab5c10088.991ENSPCOG00000026327RAB5C10088.991Propithecus_coquereli
ENSORLG00020008388rab5c10089.450ENSPVAG00000003867RAB5C10089.450Pteropus_vampyrus
ENSORLG00020008388rab5c9994.931ENSPNYG00000010615rab5c9994.931Pundamilia_nyererei
ENSORLG00020008388rab5c9689.048ENSPNYG00000015851-9987.727Pundamilia_nyererei
ENSORLG00020008388rab5c9688.095ENSPNAG00000002218-9988.095Pygocentrus_nattereri
ENSORLG00020008388rab5c9995.413ENSPNAG00000028138rab5c9995.413Pygocentrus_nattereri
ENSORLG00020008388rab5c10089.450ENSRNOG00000018568Rab5c10089.450Rattus_norvegicus
ENSORLG00020008388rab5c10088.991ENSRBIG00000031376RAB5C10088.991Rhinopithecus_bieti
ENSORLG00020008388rab5c10088.991ENSRROG00000032895RAB5C10088.991Rhinopithecus_roxellana
ENSORLG00020008388rab5c10088.991ENSSBOG00000032552-10088.991Saimiri_boliviensis_boliviensis
ENSORLG00020008388rab5c10089.450ENSSHAG00000005267-10089.450Sarcophilus_harrisii
ENSORLG00020008388rab5c9987.037ENSSFOG00015009988-9887.037Scleropages_formosus
ENSORLG00020008388rab5c9696.172ENSSMAG00000007323rab5c9994.931Scophthalmus_maximus
ENSORLG00020008388rab5c9996.313ENSSDUG00000023008rab5c9996.313Seriola_dumerili
ENSORLG00020008388rab5c9995.392ENSSLDG00000017771rab5c9995.392Seriola_lalandi_dorsalis
ENSORLG00020008388rab5c10089.908ENSSPUG00000012950-10089.908Sphenodon_punctatus
ENSORLG00020008388rab5c9996.774ENSSPAG00000006436rab5c9996.774Stegastes_partitus
ENSORLG00020008388rab5c10088.991ENSSSCG00000032467RAB5C10088.991Sus_scrofa
ENSORLG00020008388rab5c9994.931ENSTRUG00000015590rab5c9994.931Takifugu_rubripes
ENSORLG00020008388rab5c9696.190ENSTNIG00000011711rab5c9596.190Tetraodon_nigroviridis
ENSORLG00020008388rab5c10088.991ENSTBEG00000007092RAB5C10088.991Tupaia_belangeri
ENSORLG00020008388rab5c10088.991ENSTTRG00000006673RAB5C10088.991Tursiops_truncatus
ENSORLG00020008388rab5c10088.991ENSUAMG00000024343RAB5C10088.991Ursus_americanus
ENSORLG00020008388rab5c10088.991ENSUMAG00000023270RAB5C10088.991Ursus_maritimus
ENSORLG00020008388rab5c9996.774ENSXCOG00000016788rab5c9996.774Xiphophorus_couchianus
ENSORLG00020008388rab5c9590.431ENSXCOG00000006300-9987.783Xiphophorus_couchianus
ENSORLG00020008388rab5c9988.940ENSXMAG00000022179-9988.940Xiphophorus_maculatus
ENSORLG00020008388rab5c9996.774ENSXMAG00000003266rab5c9996.774Xiphophorus_maculatus

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