EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020008580 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 10717 bases
Position: chr24:9243737-9254453
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020007704	RNase_Zc3h12a	PF11977.8	1.6e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020002440	-	1851	-	ENSORLP00020007704	616 (aa)	-	-

Gene Model

Click here to download ENSORLG00020008580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020008580	-	50	55.205	ENSORLG00020016107	-	55	55.205

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020008580	-	50	57.911	ENSG00000163874	ZC3H12A	78	59.910	Homo_sapiens
ENSORLG00020008580	-	50	61.238	ENSAPOG00000001632	-	57	63.509	Acanthochromis_polyacanthus
ENSORLG00020008580	-	91	61.474	ENSAPOG00000005848	-	99	62.416	Acanthochromis_polyacanthus
ENSORLG00020008580	-	50	58.842	ENSAMEG00000000991	ZC3H12A	95	42.593	Ailuropoda_melanoleuca
ENSORLG00020008580	-	50	52.960	ENSACIG00000004135	si:dkey-206d17.12	80	53.478	Amphilophus_citrinellus
ENSORLG00020008580	-	89	62.437	ENSACIG00000006790	-	92	78.767	Amphilophus_citrinellus
ENSORLG00020008580	-	91	62.626	ENSAOCG00000009106	-	99	63.423	Amphiprion_ocellaris
ENSORLG00020008580	-	51	53.453	ENSAOCG00000003866	-	85	55.128	Amphiprion_ocellaris
ENSORLG00020008580	-	91	62.312	ENSAPEG00000004229	-	99	63.255	Amphiprion_percula
ENSORLG00020008580	-	51	53.453	ENSAPEG00000005727	-	91	43.709	Amphiprion_percula
ENSORLG00020008580	-	86	62.976	ENSATEG00000013053	-	79	84.722	Anabas_testudineus
ENSORLG00020008580	-	51	57.059	ENSATEG00000002260	-	88	55.814	Anabas_testudineus
ENSORLG00020008580	-	51	58.125	ENSANAG00000009908	ZC3H12A	88	55.556	Aotus_nancymaae
ENSORLG00020008580	-	91	60.720	ENSACLG00000018534	-	100	60.661	Astatotilapia_calliptera
ENSORLG00020008580	-	86	49.470	ENSAMXG00000030754	-	54	72.425	Astyanax_mexicanus
ENSORLG00020008580	-	57	53.571	ENSBTAG00000011316	ZC3H12A	97	42.185	Bos_taurus
ENSORLG00020008580	-	54	55.193	ENSCJAG00000041792	ZC3H12A	96	42.475	Callithrix_jacchus
ENSORLG00020008580	-	61	52.030	ENSCHIG00000021957	ZC3H12A	53	58.199	Capra_hircus
ENSORLG00020008580	-	53	55.891	ENSTSYG00000035959	ZC3H12A	95	42.685	Carlito_syrichta
ENSORLG00020008580	-	85	43.783	ENSCAPG00000015365	ZC3H12A	99	44.186	Cavia_aperea
ENSORLG00020008580	-	85	43.433	ENSCPOG00000011081	ZC3H12A	99	43.828	Cavia_porcellus
ENSORLG00020008580	-	51	58.125	ENSCCAG00000023848	ZC3H12A	96	42.738	Cebus_capucinus
ENSORLG00020008580	-	50	58.805	ENSCATG00000037700	ZC3H12A	86	56.175	Cercocebus_atys
ENSORLG00020008580	-	50	58.544	ENSCSAG00000001106	ZC3H12A	95	43.239	Chlorocebus_sabaeus
ENSORLG00020008580	-	50	58.861	ENSCANG00000042287	ZC3H12A	85	56.225	Colobus_angolensis_palliatus
ENSORLG00020008580	-	86	39.199	ENSCSEG00000019043	zc3h12a	94	39.024	Cynoglossus_semilaevis
ENSORLG00020008580	-	58	50.529	ENSCSEG00000010073	-	79	55.274	Cynoglossus_semilaevis
ENSORLG00020008580	-	85	61.172	ENSCVAG00000001077	-	82	85.845	Cyprinodon_variegatus
ENSORLG00020008580	-	86	38.339	ENSCVAG00000017420	zc3h12a	51	54.114	Cyprinodon_variegatus
ENSORLG00020008580	-	50	57.407	ENSDARG00000101034	si:dkey-206d17.12	50	57.407	Danio_rerio
ENSORLG00020008580	-	50	57.911	ENSDORG00000012666	Zc3h12a	52	58.544	Dipodomys_ordii
ENSORLG00020008580	-	50	57.556	ENSEASG00005012220	ZC3H12A	97	41.286	Equus_asinus_asinus
ENSORLG00020008580	-	50	57.556	ENSECAG00000009562	ZC3H12A	92	41.286	Equus_caballus
ENSORLG00020008580	-	51	53.049	ENSELUG00000018274	zc3h12a	50	53.049	Esox_lucius
ENSORLG00020008580	-	84	52.453	ENSELUG00000018728	-	89	51.777	Esox_lucius
ENSORLG00020008580	-	50	57.643	ENSFCAG00000008757	ZC3H12A	95	42.044	Felis_catus
ENSORLG00020008580	-	87	60.286	ENSFHEG00000011425	-	99	60.180	Fundulus_heteroclitus
ENSORLG00020008580	-	50	52.050	ENSFHEG00000001019	zc3h12a	51	52.698	Fundulus_heteroclitus
ENSORLG00020008580	-	86	39.373	ENSGMOG00000007388	-	99	39.442	Gadus_morhua
ENSORLG00020008580	-	87	61.728	ENSGAFG00000009523	-	98	61.470	Gambusia_affinis
ENSORLG00020008580	-	50	52.564	ENSGAFG00000019001	si:dkey-206d17.12	55	52.244	Gambusia_affinis
ENSORLG00020008580	-	50	54.545	ENSGAFG00000008480	zc3h12a	50	54.545	Gambusia_affinis
ENSORLG00020008580	-	86	39.347	ENSGACG00000013859	zc3h12a	97	39.347	Gasterosteus_aculeatus
ENSORLG00020008580	-	51	80.317	ENSGACG00000006636	-	99	80.192	Gasterosteus_aculeatus
ENSORLG00020008580	-	50	57.911	ENSGGOG00000009268	ZC3H12A	96	43.144	Gorilla_gorilla
ENSORLG00020008580	-	91	60.720	ENSHBUG00000021584	-	99	77.344	Haplochromis_burtoni
ENSORLG00020008580	-	88	42.268	ENSHGLG00000012808	ZC3H12A	91	43.186	Heterocephalus_glaber_female
ENSORLG00020008580	-	59	45.478	ENSHCOG00000004255	si:dkey-206d17.12	91	47.845	Hippocampus_comes
ENSORLG00020008580	-	86	50.269	ENSIPUG00000011663	-	98	50.181	Ictalurus_punctatus
ENSORLG00020008580	-	57	50.843	ENSIPUG00000005852	si:dkey-206d17.12	52	53.333	Ictalurus_punctatus
ENSORLG00020008580	-	50	58.917	ENSSTOG00000026842	ZC3H12A	95	41.751	Ictidomys_tridecemlineatus
ENSORLG00020008580	-	86	62.222	ENSKMAG00000014401	-	98	62.011	Kryptolebias_marmoratus
ENSORLG00020008580	-	87	59.582	ENSLBEG00000012121	-	99	59.259	Labrus_bergylta
ENSORLG00020008580	-	50	61.859	ENSLACG00000017365	ZC3H12A	50	62.706	Latimeria_chalumnae
ENSORLG00020008580	-	51	58.333	ENSLOCG00000003232	si:dkey-206d17.12	50	58.642	Lepisosteus_oculatus
ENSORLG00020008580	-	50	58.805	ENSMFAG00000032647	ZC3H12A	86	56.175	Macaca_fascicularis
ENSORLG00020008580	-	50	58.805	ENSMMUG00000010323	ZC3H12A	95	43.428	Macaca_mulatta
ENSORLG00020008580	-	50	58.805	ENSMNEG00000040453	ZC3H12A	86	56.000	Macaca_nemestrina
ENSORLG00020008580	-	50	58.805	ENSMLEG00000034570	ZC3H12A	86	56.175	Mandrillus_leucophaeus
ENSORLG00020008580	-	91	60.661	ENSMAMG00000004463	-	83	84.932	Mastacembelus_armatus
ENSORLG00020008580	-	91	60.720	ENSMZEG00005015555	-	100	60.661	Maylandia_zebra
ENSORLG00020008580	-	85	42.379	ENSMGAG00000003371	ZC3H12A	96	42.685	Meleagris_gallopavo
ENSORLG00020008580	-	88	43.248	ENSMAUG00000012893	Zc3h12a	91	43.617	Mesocricetus_auratus
ENSORLG00020008580	-	92	41.951	ENSMICG00000004790	ZC3H12A	97	42.182	Microcebus_murinus
ENSORLG00020008580	-	50	52.997	ENSMMOG00000013604	si:dkey-206d17.12	53	52.997	Mola_mola
ENSORLG00020008580	-	88	60.139	ENSMMOG00000014855	-	92	79.325	Mola_mola
ENSORLG00020008580	-	85	40.210	ENSMMOG00000000727	zc3h12a	95	40.385	Mola_mola
ENSORLG00020008580	-	90	43.216	ENSMODG00000017794	ZC3H12A	91	44.214	Monodelphis_domestica
ENSORLG00020008580	-	88	60.485	ENSMALG00000018908	-	99	59.965	Monopterus_albus
ENSORLG00020008580	-	88	39.872	ENSMALG00000012319	zc3h12a	52	56.790	Monopterus_albus
ENSORLG00020008580	-	91	42.571	MGP_CAROLIEiJ_G0026462	Zc3h12a	53	58.204	Mus_caroli
ENSORLG00020008580	-	91	43.355	ENSMUSG00000042677	Zc3h12a	95	44.088	Mus_musculus
ENSORLG00020008580	-	51	59.021	MGP_SPRETEiJ_G0027441	Zc3h12a	91	55.056	Mus_spretus
ENSORLG00020008580	-	50	58.280	ENSMPUG00000014758	ZC3H12A	98	43.590	Mustela_putorius_furo
ENSORLG00020008580	-	89	42.689	ENSNGAG00000018725	Zc3h12a	96	42.034	Nannospalax_galili
ENSORLG00020008580	-	89	61.318	ENSNBRG00000010961	-	83	85.388	Neolamprologus_brichardi
ENSORLG00020008580	-	50	54.516	ENSNLEG00000011545	ZC3H12A	96	40.803	Nomascus_leucogenys
ENSORLG00020008580	-	84	33.333	ENSMEUG00000003389	ZC3H12A	99	33.333	Notamacropus_eugenii
ENSORLG00020008580	-	86	39.716	ENSONIG00000016235	zc3h12a	96	39.716	Oreochromis_niloticus
ENSORLG00020008580	-	91	42.450	ENSOANG00000002060	ZC3H12A	94	42.282	Ornithorhynchus_anatinus
ENSORLG00020008580	-	50	59.365	ENSOCUG00000010856	ZC3H12A	75	62.759	Oryctolagus_cuniculus
ENSORLG00020008580	-	87	97.584	ENSORLG00000015280	-	100	97.584	Oryzias_latipes
ENSORLG00020008580	-	100	98.539	ENSORLG00015003680	-	100	98.539	Oryzias_latipes_hsok
ENSORLG00020008580	-	50	55.205	ENSORLG00015007634	ZC3H12A	55	55.205	Oryzias_latipes_hsok
ENSORLG00020008580	-	87	85.451	ENSOMEG00000011669	-	99	85.075	Oryzias_melastigma
ENSORLG00020008580	-	51	55.452	ENSOMEG00000005602	si:dkey-206d17.12	55	55.452	Oryzias_melastigma
ENSORLG00020008580	-	86	38.270	ENSOMEG00000000483	zc3h12a	92	38.014	Oryzias_melastigma
ENSORLG00020008580	-	85	42.078	ENSOGAG00000030940	ZC3H12A	91	42.832	Otolemur_garnettii
ENSORLG00020008580	-	50	57.595	ENSOARG00000019760	ZC3H12A	72	57.962	Ovis_aries
ENSORLG00020008580	-	50	58.544	ENSPPAG00000041054	ZC3H12A	87	56.225	Pan_paniscus
ENSORLG00020008580	-	57	53.571	ENSPPRG00000014359	ZC3H12A	95	42.379	Panthera_pardus
ENSORLG00020008580	-	57	53.297	ENSPTIG00000012943	ZC3H12A	87	55.020	Panthera_tigris_altaica
ENSORLG00020008580	-	50	58.544	ENSPTRG00000000544	ZC3H12A	87	56.225	Pan_troglodytes
ENSORLG00020008580	-	50	58.805	ENSPANG00000011821	ZC3H12A	86	56.000	Papio_anubis
ENSORLG00020008580	-	84	50.089	ENSPKIG00000019720	-	99	49.639	Paramormyrops_kingsleyae
ENSORLG00020008580	-	86	43.576	ENSPSIG00000009198	ZC3H12A	98	43.182	Pelodiscus_sinensis
ENSORLG00020008580	-	86	41.145	ENSPMGG00000009790	-	53	58.537	Periophthalmus_magnuspinnatus
ENSORLG00020008580	-	87	39.280	ENSPMGG00000004114	zc3h12a	52	56.610	Periophthalmus_magnuspinnatus
ENSORLG00020008580	-	62	35.572	ENSPFOG00000002933	si:dkey-206d17.12	97	35.917	Poecilia_formosa
ENSORLG00020008580	-	53	52.679	ENSPFOG00000013935	zc3h12a	50	54.859	Poecilia_formosa
ENSORLG00020008580	-	87	61.348	ENSPFOG00000004135	-	99	61.002	Poecilia_formosa
ENSORLG00020008580	-	62	35.821	ENSPLAG00000016243	si:dkey-206d17.12	89	36.504	Poecilia_latipinna
ENSORLG00020008580	-	86	61.101	ENSPLAG00000001211	-	99	60.784	Poecilia_latipinna
ENSORLG00020008580	-	53	52.679	ENSPLAG00000020965	zc3h12a	50	54.859	Poecilia_latipinna
ENSORLG00020008580	-	85	39.042	ENSPMEG00000011188	si:dkey-206d17.12	93	38.349	Poecilia_mexicana
ENSORLG00020008580	-	53	51.929	ENSPMEG00000013674	zc3h12a	50	54.062	Poecilia_mexicana
ENSORLG00020008580	-	53	52.888	ENSPREG00000005453	zc3h12a	50	55.128	Poecilia_reticulata
ENSORLG00020008580	-	87	60.453	ENSPREG00000020369	-	95	60.708	Poecilia_reticulata
ENSORLG00020008580	-	56	51.928	ENSPREG00000001607	-	73	59.375	Poecilia_reticulata
ENSORLG00020008580	-	50	58.675	ENSPPYG00000001534	ZC3H12A	96	43.069	Pongo_abelii
ENSORLG00020008580	-	50	58.917	ENSPCOG00000015837	ZC3H12A	95	42.132	Propithecus_coquereli
ENSORLG00020008580	-	91	60.720	ENSPNYG00000010663	-	100	60.661	Pundamilia_nyererei
ENSORLG00020008580	-	87	49.249	ENSPNAG00000012124	-	99	48.475	Pygocentrus_nattereri
ENSORLG00020008580	-	89	42.230	ENSRNOG00000009131	Zc3h12a	52	58.176	Rattus_norvegicus
ENSORLG00020008580	-	50	58.805	ENSRROG00000037444	ZC3H12A	86	56.175	Rhinopithecus_roxellana
ENSORLG00020008580	-	50	58.861	ENSSBOG00000028357	ZC3H12A	96	42.881	Saimiri_boliviensis_boliviensis
ENSORLG00020008580	-	86	39.065	ENSSMAG00000005140	zc3h12a	96	38.963	Scophthalmus_maximus
ENSORLG00020008580	-	87	62.995	ENSSMAG00000017632	-	99	62.281	Scophthalmus_maximus
ENSORLG00020008580	-	88	63.986	ENSSDUG00000010581	-	90	82.609	Seriola_dumerili
ENSORLG00020008580	-	88	63.573	ENSSLDG00000022022	-	93	63.410	Seriola_lalandi_dorsalis
ENSORLG00020008580	-	92	63.712	ENSSPAG00000022537	-	99	63.361	Stegastes_partitus
ENSORLG00020008580	-	73	42.770	ENSTGUG00000001563	ZC3H12A	98	44.492	Taeniopygia_guttata
ENSORLG00020008580	-	86	36.516	ENSTRUG00000010565	si:dkey-206d17.12	51	52.492	Takifugu_rubripes
ENSORLG00020008580	-	50	58.842	ENSUAMG00000014105	ZC3H12A	95	42.424	Ursus_americanus
ENSORLG00020008580	-	50	59.164	ENSUMAG00000001122	ZC3H12A	98	42.593	Ursus_maritimus
ENSORLG00020008580	-	86	40.522	ENSXETG00000011465	zc3h12a	99	40.175	Xenopus_tropicalis
ENSORLG00020008580	-	87	60.739	ENSXCOG00000001538	-	89	80.556	Xiphophorus_couchianus
ENSORLG00020008580	-	53	53.012	ENSXCOG00000008984	zc3h12a	87	45.205	Xiphophorus_couchianus
ENSORLG00020008580	-	87	61.121	ENSXMAG00000005023	-	89	80.556	Xiphophorus_maculatus
ENSORLG00020008580	-	53	52.711	ENSXMAG00000014646	zc3h12a	50	54.890	Xiphophorus_maculatus
ENSORLG00020008580	-	56	52.051	ENSXMAG00000014715	-	83	59.483	Xiphophorus_maculatus