EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020008750 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-33c12.4
Alias: -
Full Name: si:dkey-33c12.4
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 26488 bases
Position: chr22:24957077-24983564
Accession: ZDB-GENE-030131-2527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020007863	RRM_1	PF00076.22	4.6e-08	1	1
ENSORLP00020007879	RRM_1	PF00076.22	4.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020002172	-	3320	-	ENSORLP00020007863	646 (aa)	-	-
ENSORLT00020002152	-	3368	-	ENSORLP00020007879	662 (aa)	-	-

Gene Model

Click here to download ENSORLG00020008750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020008750	si:dkey-33c12.4	99	50.587	ENSAPOG00000005058	si:dkey-33c12.4	96	53.931	Acanthochromis_polyacanthus
ENSORLG00020008750	si:dkey-33c12.4	56	30.159	ENSACIG00000021684	zgc:123010	73	41.667	Amphilophus_citrinellus
ENSORLG00020008750	si:dkey-33c12.4	55	30.130	ENSAOCG00000005910	zgc:123010	63	30.130	Amphiprion_ocellaris
ENSORLG00020008750	si:dkey-33c12.4	97	52.553	ENSAOCG00000020066	si:dkey-33c12.4	95	54.961	Amphiprion_ocellaris
ENSORLG00020008750	si:dkey-33c12.4	98	49.247	ENSATEG00000018885	si:dkey-33c12.4	97	52.342	Anabas_testudineus
ENSORLG00020008750	si:dkey-33c12.4	50	39.503	ENSATEG00000018302	-	57	40.278	Anabas_testudineus
ENSORLG00020008750	si:dkey-33c12.4	58	32.394	ENSATEG00000022160	-	80	32.394	Anabas_testudineus
ENSORLG00020008750	si:dkey-33c12.4	96	51.121	ENSACLG00000014192	si:dkey-33c12.4	99	52.133	Astatotilapia_calliptera
ENSORLG00020008750	si:dkey-33c12.4	55	30.688	ENSAMXG00000041967	zgc:123010	62	30.688	Astyanax_mexicanus
ENSORLG00020008750	si:dkey-33c12.4	87	34.006	ENSAMXG00000010871	si:dkey-33c12.4	98	35.110	Astyanax_mexicanus
ENSORLG00020008750	si:dkey-33c12.4	54	38.172	ENSCPBG00000024454	-	65	34.716	Chrysemys_picta_bellii
ENSORLG00020008750	si:dkey-33c12.4	99	48.882	ENSCVAG00000006564	-	98	47.727	Cyprinodon_variegatus
ENSORLG00020008750	si:dkey-33c12.4	65	30.023	ENSCVAG00000013288	zgc:123010	63	30.649	Cyprinodon_variegatus
ENSORLG00020008750	si:dkey-33c12.4	52	40.331	ENSCVAG00000004187	-	59	39.394	Cyprinodon_variegatus
ENSORLG00020008750	si:dkey-33c12.4	58	39.642	ENSDARG00000057890	si:dkey-33c12.4	59	38.734	Danio_rerio
ENSORLG00020008750	si:dkey-33c12.4	55	30.263	ENSDARG00000039082	zgc:123010	64	37.989	Danio_rerio
ENSORLG00020008750	si:dkey-33c12.4	54	30.563	ENSELUG00000022008	zgc:123010	74	41.875	Esox_lucius
ENSORLG00020008750	si:dkey-33c12.4	73	34.808	ENSELUG00000001633	-	64	37.805	Esox_lucius
ENSORLG00020008750	si:dkey-33c12.4	95	35.045	ENSELUG00000002009	si:dkey-33c12.4	97	45.706	Esox_lucius
ENSORLG00020008750	si:dkey-33c12.4	55	30.909	ENSFHEG00000002306	zgc:123010	63	30.909	Fundulus_heteroclitus
ENSORLG00020008750	si:dkey-33c12.4	99	51.320	ENSFHEG00000005521	si:dkey-33c12.4	98	52.174	Fundulus_heteroclitus
ENSORLG00020008750	si:dkey-33c12.4	56	36.480	ENSFHEG00000009983	-	64	36.316	Fundulus_heteroclitus
ENSORLG00020008750	si:dkey-33c12.4	89	50.779	ENSGAFG00000017596	si:dkey-33c12.4	99	50.373	Gambusia_affinis
ENSORLG00020008750	si:dkey-33c12.4	56	30.649	ENSGAFG00000009373	zgc:123010	53	41.026	Gambusia_affinis
ENSORLG00020008750	si:dkey-33c12.4	53	58.757	ENSGACG00000004936	-	98	57.576	Gasterosteus_aculeatus
ENSORLG00020008750	si:dkey-33c12.4	96	50.822	ENSHBUG00000010735	si:dkey-33c12.4	97	53.125	Haplochromis_burtoni
ENSORLG00020008750	si:dkey-33c12.4	96	34.168	ENSIPUG00000005998	si:dkey-33c12.4	99	34.978	Ictalurus_punctatus
ENSORLG00020008750	si:dkey-33c12.4	99	50.742	ENSKMAG00000016610	si:dkey-33c12.4	96	54.194	Kryptolebias_marmoratus
ENSORLG00020008750	si:dkey-33c12.4	55	30.130	ENSLBEG00000023984	zgc:123010	59	38.857	Labrus_bergylta
ENSORLG00020008750	si:dkey-33c12.4	60	35.129	ENSLBEG00000028046	-	66	35.129	Labrus_bergylta
ENSORLG00020008750	si:dkey-33c12.4	91	47.068	ENSLBEG00000017203	-	99	48.166	Labrus_bergylta
ENSORLG00020008750	si:dkey-33c12.4	98	48.281	ENSLBEG00000021088	-	99	49.327	Labrus_bergylta
ENSORLG00020008750	si:dkey-33c12.4	50	37.209	ENSLACG00000004602	-	58	36.676	Latimeria_chalumnae
ENSORLG00020008750	si:dkey-33c12.4	79	34.392	ENSLOCG00000001861	-	64	38.995	Lepisosteus_oculatus
ENSORLG00020008750	si:dkey-33c12.4	98	48.673	ENSMAMG00000000111	si:dkey-33c12.4	99	49.705	Mastacembelus_armatus
ENSORLG00020008750	si:dkey-33c12.4	50	31.897	ENSMAMG00000001145	zgc:123010	73	31.909	Mastacembelus_armatus
ENSORLG00020008750	si:dkey-33c12.4	51	30.233	ENSMAMG00000003394	-	80	30.321	Mastacembelus_armatus
ENSORLG00020008750	si:dkey-33c12.4	50	30.814	ENSMAMG00000002377	-	66	41.912	Mastacembelus_armatus
ENSORLG00020008750	si:dkey-33c12.4	50	31.105	ENSMAMG00000002460	-	69	42.647	Mastacembelus_armatus
ENSORLG00020008750	si:dkey-33c12.4	96	50.746	ENSMZEG00005014276	si:dkey-33c12.4	97	52.106	Maylandia_zebra
ENSORLG00020008750	si:dkey-33c12.4	51	38.268	ENSMZEG00005000585	-	59	38.356	Maylandia_zebra
ENSORLG00020008750	si:dkey-33c12.4	78	30.523	ENSMMOG00000010544	zgc:123010	62	45.000	Mola_mola
ENSORLG00020008750	si:dkey-33c12.4	50	39.266	ENSMALG00000003167	-	66	35.811	Monopterus_albus
ENSORLG00020008750	si:dkey-33c12.4	55	31.026	ENSMALG00000017698	zgc:123010	64	30.769	Monopterus_albus
ENSORLG00020008750	si:dkey-33c12.4	88	50.400	ENSMALG00000002265	si:dkey-33c12.4	99	48.806	Monopterus_albus
ENSORLG00020008750	si:dkey-33c12.4	58	35.185	ENSNBRG00000021157	zgc:123010	94	34.981	Neolamprologus_brichardi
ENSORLG00020008750	si:dkey-33c12.4	53	61.473	ENSONIG00000012263	-	92	78.125	Oreochromis_niloticus
ENSORLG00020008750	si:dkey-33c12.4	51	37.006	ENSORLG00000030385	-	56	36.416	Oryzias_latipes
ENSORLG00020008750	si:dkey-33c12.4	100	97.833	ENSORLG00000029651	si:dkey-33c12.4	100	97.833	Oryzias_latipes
ENSORLG00020008750	si:dkey-33c12.4	75	32.617	ENSORLG00015008400	-	50	38.188	Oryzias_latipes_hsok
ENSORLG00020008750	si:dkey-33c12.4	51	39.554	ENSOMEG00000009428	-	55	38.719	Oryzias_melastigma
ENSORLG00020008750	si:dkey-33c12.4	99	80.828	ENSOMEG00000008913	-	99	80.526	Oryzias_melastigma
ENSORLG00020008750	si:dkey-33c12.4	55	31.283	ENSPKIG00000015521	zgc:123010	96	32.110	Paramormyrops_kingsleyae
ENSORLG00020008750	si:dkey-33c12.4	85	36.170	ENSPKIG00000011819	-	62	41.262	Paramormyrops_kingsleyae
ENSORLG00020008750	si:dkey-33c12.4	89	50.613	ENSPFOG00000009143	si:dkey-33c12.4	99	50.893	Poecilia_formosa
ENSORLG00020008750	si:dkey-33c12.4	56	30.649	ENSPFOG00000001073	zgc:123010	63	30.130	Poecilia_formosa
ENSORLG00020008750	si:dkey-33c12.4	96	48.949	ENSPLAG00000022537	si:dkey-33c12.4	99	51.433	Poecilia_latipinna
ENSORLG00020008750	si:dkey-33c12.4	56	30.649	ENSPLAG00000007711	zgc:123010	63	30.130	Poecilia_latipinna
ENSORLG00020008750	si:dkey-33c12.4	56	30.649	ENSPMEG00000005092	zgc:123010	63	30.130	Poecilia_mexicana
ENSORLG00020008750	si:dkey-33c12.4	89	50.760	ENSPMEG00000015590	si:dkey-33c12.4	99	50.222	Poecilia_mexicana
ENSORLG00020008750	si:dkey-33c12.4	96	50.896	ENSPNYG00000018262	si:dkey-33c12.4	97	52.886	Pundamilia_nyererei
ENSORLG00020008750	si:dkey-33c12.4	96	32.586	ENSPNAG00000018386	si:dkey-33c12.4	97	35.748	Pygocentrus_nattereri
ENSORLG00020008750	si:dkey-33c12.4	55	41.033	ENSSFOG00015005186	-	70	36.996	Scleropages_formosus
ENSORLG00020008750	si:dkey-33c12.4	54	43.324	ENSSFOG00015009199	-	58	42.091	Scleropages_formosus
ENSORLG00020008750	si:dkey-33c12.4	59	30.607	ENSSMAG00000002904	zgc:123010	87	32.653	Scophthalmus_maximus
ENSORLG00020008750	si:dkey-33c12.4	97	46.915	ENSSMAG00000008147	si:dkey-33c12.4	97	49.011	Scophthalmus_maximus
ENSORLG00020008750	si:dkey-33c12.4	55	30.390	ENSSDUG00000008651	zgc:123010	63	30.130	Seriola_dumerili
ENSORLG00020008750	si:dkey-33c12.4	51	41.143	ENSSDUG00000010976	-	56	40.678	Seriola_dumerili
ENSORLG00020008750	si:dkey-33c12.4	98	49.854	ENSSDUG00000003213	si:dkey-33c12.4	99	49.853	Seriola_dumerili
ENSORLG00020008750	si:dkey-33c12.4	55	30.390	ENSSLDG00000019386	zgc:123010	65	30.130	Seriola_lalandi_dorsalis
ENSORLG00020008750	si:dkey-33c12.4	98	50.073	ENSSLDG00000009448	si:dkey-33c12.4	99	50.957	Seriola_lalandi_dorsalis
ENSORLG00020008750	si:dkey-33c12.4	51	41.026	ENSSLDG00000012846	-	58	40.845	Seriola_lalandi_dorsalis
ENSORLG00020008750	si:dkey-33c12.4	99	50.071	ENSSPAG00000022577	-	96	53.159	Stegastes_partitus
ENSORLG00020008750	si:dkey-33c12.4	55	30.990	ENSSPAG00000013621	zgc:123010	63	30.749	Stegastes_partitus
ENSORLG00020008750	si:dkey-33c12.4	74	31.656	ENSTRUG00000000057	-	71	31.613	Takifugu_rubripes
ENSORLG00020008750	si:dkey-33c12.4	55	60.331	ENSTRUG00000022374	si:dkey-33c12.4	88	47.746	Takifugu_rubripes
ENSORLG00020008750	si:dkey-33c12.4	50	30.259	ENSTNIG00000001303	zgc:123010	90	30.259	Tetraodon_nigroviridis
ENSORLG00020008750	si:dkey-33c12.4	51	56.325	ENSTNIG00000010542	-	94	66.667	Tetraodon_nigroviridis
ENSORLG00020008750	si:dkey-33c12.4	50	32.571	ENSXCOG00000012281	zgc:123010	72	30.878	Xiphophorus_couchianus
ENSORLG00020008750	si:dkey-33c12.4	56	30.649	ENSXMAG00000002598	zgc:123010	63	30.130	Xiphophorus_maculatus
ENSORLG00020008750	si:dkey-33c12.4	89	52.031	ENSXMAG00000018535	si:dkey-33c12.4	99	51.802	Xiphophorus_maculatus