EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020008792 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 9119 bases
Position: chr13:10032734-10041852
Accession: ZDB-GENE-030131-3762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020007873	AARP2CN	PF08142.12	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020002141	-	3148	-	ENSORLP00020007873	833 (aa)	-	-

Gene Model

Click here to download ENSORLG00020008792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020008792	tsr1	99	54.022	ENSG00000167721	TSR1	99	54.324	Homo_sapiens
ENSORLG00020008792	tsr1	99	84.431	ENSAPOG00000020891	tsr1	100	84.551	Acanthochromis_polyacanthus
ENSORLG00020008792	tsr1	99	54.392	ENSAMEG00000007599	TSR1	99	53.670	Ailuropoda_melanoleuca
ENSORLG00020008792	tsr1	99	83.755	ENSACIG00000007090	tsr1	100	82.671	Amphilophus_citrinellus
ENSORLG00020008792	tsr1	99	84.736	ENSAOCG00000023284	tsr1	100	84.736	Amphiprion_ocellaris
ENSORLG00020008792	tsr1	93	84.258	ENSAPEG00000008452	tsr1	100	84.258	Amphiprion_percula
ENSORLG00020008792	tsr1	99	83.433	ENSATEG00000021961	tsr1	100	83.194	Anabas_testudineus
ENSORLG00020008792	tsr1	91	59.346	ENSAPLG00000013422	TSR1	100	59.061	Anas_platyrhynchos
ENSORLG00020008792	tsr1	71	49.249	ENSACAG00000000859	TSR1	92	48.590	Anolis_carolinensis
ENSORLG00020008792	tsr1	97	55.515	ENSANAG00000031071	TSR1	99	54.745	Aotus_nancymaae
ENSORLG00020008792	tsr1	100	84.928	ENSACLG00000007595	tsr1	100	85.167	Astatotilapia_calliptera
ENSORLG00020008792	tsr1	50	72.381	ENSAMXG00000008470	tsr1	90	72.535	Astyanax_mexicanus
ENSORLG00020008792	tsr1	98	55.609	ENSBTAG00000004225	TSR1	99	54.982	Bos_taurus
ENSORLG00020008792	tsr1	65	31.556	WBGene00022021	Y61A9LA.10	50	31.222	Caenorhabditis_elegans
ENSORLG00020008792	tsr1	97	54.369	ENSCJAG00000012456	TSR1	99	53.593	Callithrix_jacchus
ENSORLG00020008792	tsr1	89	52.513	ENSCAFG00000019273	-	100	55.783	Canis_familiaris
ENSORLG00020008792	tsr1	99	54.796	ENSCAFG00000002106	-	99	53.966	Canis_familiaris
ENSORLG00020008792	tsr1	99	54.436	ENSCAFG00020009728	TSR1	99	53.966	Canis_lupus_dingo
ENSORLG00020008792	tsr1	99	55.918	ENSCHIG00000023935	TSR1	99	55.168	Capra_hircus
ENSORLG00020008792	tsr1	99	55.542	ENSTSYG00000005468	TSR1	99	54.699	Carlito_syrichta
ENSORLG00020008792	tsr1	92	54.264	ENSCPOG00000014833	TSR1	99	54.475	Cavia_porcellus
ENSORLG00020008792	tsr1	92	53.548	ENSCCAG00000028962	TSR1	98	52.979	Cebus_capucinus
ENSORLG00020008792	tsr1	97	54.202	ENSCATG00000044262	TSR1	98	53.480	Cercocebus_atys
ENSORLG00020008792	tsr1	99	54.699	ENSCLAG00000005567	TSR1	99	54.502	Chinchilla_lanigera
ENSORLG00020008792	tsr1	97	54.324	ENSCSAG00000013788	TSR1	98	53.602	Chlorocebus_sabaeus
ENSORLG00020008792	tsr1	98	56.675	ENSCPBG00000020363	TSR1	98	55.806	Chrysemys_picta_bellii
ENSORLG00020008792	tsr1	96	44.840	ENSCING00000020658	-	99	44.294	Ciona_intestinalis
ENSORLG00020008792	tsr1	95	44.431	ENSCSAVG00000001875	-	100	43.951	Ciona_savignyi
ENSORLG00020008792	tsr1	97	56.573	ENSCANG00000033056	TSR1	95	69.595	Colobus_angolensis_palliatus
ENSORLG00020008792	tsr1	99	53.855	ENSCGRG00001023942	Tsr1	99	53.782	Cricetulus_griseus_chok1gshd
ENSORLG00020008792	tsr1	99	49.333	ENSCGRG00000013015	Tsr1	97	65.556	Cricetulus_griseus_crigri
ENSORLG00020008792	tsr1	99	78.966	ENSCSEG00000013009	tsr1	100	78.966	Cynoglossus_semilaevis
ENSORLG00020008792	tsr1	99	82.452	ENSCVAG00000000506	tsr1	100	82.572	Cyprinodon_variegatus
ENSORLG00020008792	tsr1	99	73.381	ENSDARG00000007744	tsr1	100	73.072	Danio_rerio
ENSORLG00020008792	tsr1	99	57.521	ENSDNOG00000004715	TSR1	99	57.465	Dasypus_novemcinctus
ENSORLG00020008792	tsr1	99	55.072	ENSDORG00000016371	-	99	54.106	Dipodomys_ordii
ENSORLG00020008792	tsr1	95	49.061	ENSDORG00000023234	-	99	47.810	Dipodomys_ordii
ENSORLG00020008792	tsr1	96	44.623	FBgn0037073	Tsr1	96	44.458	Drosophila_melanogaster
ENSORLG00020008792	tsr1	86	68.525	ENSETEG00000017534	TSR1	89	67.213	Echinops_telfairi
ENSORLG00020008792	tsr1	95	52.321	ENSEBUG00000013731	TSR1	98	51.443	Eptatretus_burgeri
ENSORLG00020008792	tsr1	99	55.422	ENSEASG00005009302	TSR1	97	55.060	Equus_asinus_asinus
ENSORLG00020008792	tsr1	99	55.368	ENSECAG00000009114	TSR1	99	55.006	Equus_caballus
ENSORLG00020008792	tsr1	100	73.866	ENSELUG00000020984	tsr1	96	73.866	Esox_lucius
ENSORLG00020008792	tsr1	99	54.964	ENSFCAG00000006313	TSR1	99	53.976	Felis_catus
ENSORLG00020008792	tsr1	99	58.999	ENSFALG00000006532	TSR1	99	58.511	Ficedula_albicollis
ENSORLG00020008792	tsr1	99	55.085	ENSFDAG00000006038	TSR1	99	54.358	Fukomys_damarensis
ENSORLG00020008792	tsr1	100	81.742	ENSFHEG00000003626	tsr1	100	81.862	Fundulus_heteroclitus
ENSORLG00020008792	tsr1	99	71.018	ENSGMOG00000010336	tsr1	100	71.856	Gadus_morhua
ENSORLG00020008792	tsr1	100	82.156	ENSGAFG00000012993	tsr1	100	82.395	Gambusia_affinis
ENSORLG00020008792	tsr1	99	78.495	ENSGACG00000010843	tsr1	100	79.167	Gasterosteus_aculeatus
ENSORLG00020008792	tsr1	98	56.189	ENSGAGG00000025619	-	99	55.516	Gopherus_agassizii
ENSORLG00020008792	tsr1	99	54.458	ENSGGOG00000001704	TSR1	99	53.959	Gorilla_gorilla
ENSORLG00020008792	tsr1	100	85.407	ENSHBUG00000017904	tsr1	100	85.526	Haplochromis_burtoni
ENSORLG00020008792	tsr1	99	56.024	ENSHGLG00000012806	-	99	54.699	Heterocephalus_glaber_female
ENSORLG00020008792	tsr1	96	48.625	ENSHGLG00000015688	-	98	48.070	Heterocephalus_glaber_female
ENSORLG00020008792	tsr1	99	56.024	ENSHGLG00100015392	TSR1	99	54.699	Heterocephalus_glaber_male
ENSORLG00020008792	tsr1	99	78.219	ENSHCOG00000001432	tsr1	100	77.256	Hippocampus_comes
ENSORLG00020008792	tsr1	99	73.031	ENSIPUG00000004618	tsr1	100	73.866	Ictalurus_punctatus
ENSORLG00020008792	tsr1	99	55.797	ENSSTOG00000011819	TSR1	99	55.836	Ictidomys_tridecemlineatus
ENSORLG00020008792	tsr1	90	53.183	ENSJJAG00000019505	Tsr1	95	52.387	Jaculus_jaculus
ENSORLG00020008792	tsr1	100	83.573	ENSKMAG00000005763	tsr1	100	83.573	Kryptolebias_marmoratus
ENSORLG00020008792	tsr1	100	82.816	ENSLBEG00000021823	tsr1	100	82.697	Labrus_bergylta
ENSORLG00020008792	tsr1	99	58.817	ENSLACG00000002197	TSR1	100	58.244	Latimeria_chalumnae
ENSORLG00020008792	tsr1	91	81.579	ENSLOCG00000006491	TSR1	99	81.579	Lepisosteus_oculatus
ENSORLG00020008792	tsr1	97	54.446	ENSMFAG00000021330	TSR1	98	53.724	Macaca_fascicularis
ENSORLG00020008792	tsr1	97	54.945	ENSMMUG00000017519	TSR1	98	53.602	Macaca_mulatta
ENSORLG00020008792	tsr1	97	54.568	ENSMNEG00000031382	TSR1	98	53.602	Macaca_nemestrina
ENSORLG00020008792	tsr1	97	54.080	ENSMLEG00000036733	TSR1	98	53.358	Mandrillus_leucophaeus
ENSORLG00020008792	tsr1	100	83.254	ENSMAMG00000017918	tsr1	100	83.610	Mastacembelus_armatus
ENSORLG00020008792	tsr1	99	84.311	ENSMZEG00005007477	tsr1	100	84.431	Maylandia_zebra
ENSORLG00020008792	tsr1	99	57.688	ENSMGAG00000005576	TSR1	100	56.773	Meleagris_gallopavo
ENSORLG00020008792	tsr1	99	56.522	ENSMICG00000012943	TSR1	99	55.957	Microcebus_murinus
ENSORLG00020008792	tsr1	99	54.031	ENSMOCG00000022764	Tsr1	99	53.957	Microtus_ochrogaster
ENSORLG00020008792	tsr1	99	81.873	ENSMMOG00000014280	tsr1	100	81.273	Mola_mola
ENSORLG00020008792	tsr1	97	56.416	ENSMODG00000010658	TSR1	99	56.295	Monodelphis_domestica
ENSORLG00020008792	tsr1	99	82.734	ENSMALG00000011681	tsr1	100	83.453	Monopterus_albus
ENSORLG00020008792	tsr1	99	54.874	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.837	Mus_caroli
ENSORLG00020008792	tsr1	99	55.422	ENSMUSG00000038335	Tsr1	99	54.022	Mus_musculus
ENSORLG00020008792	tsr1	99	55.836	MGP_PahariEiJ_G0017864	Tsr1	99	54.436	Mus_pahari
ENSORLG00020008792	tsr1	99	55.716	MGP_SPRETEiJ_G0017570	Tsr1	99	54.317	Mus_spretus
ENSORLG00020008792	tsr1	81	57.562	ENSMPUG00000013000	TSR1	100	56.287	Mustela_putorius_furo
ENSORLG00020008792	tsr1	98	56.326	ENSMLUG00000003505	TSR1	99	55.690	Myotis_lucifugus
ENSORLG00020008792	tsr1	100	84.809	ENSNBRG00000020728	tsr1	100	85.167	Neolamprologus_brichardi
ENSORLG00020008792	tsr1	99	49.456	ENSNLEG00000017184	TSR1	95	66.176	Nomascus_leucogenys
ENSORLG00020008792	tsr1	98	51.387	ENSMEUG00000015828	TSR1	99	51.562	Notamacropus_eugenii
ENSORLG00020008792	tsr1	99	83.254	ENSONIG00000013131	tsr1	100	83.254	Oreochromis_niloticus
ENSORLG00020008792	tsr1	97	55.569	ENSOCUG00000014256	TSR1	99	54.921	Oryctolagus_cuniculus
ENSORLG00020008792	tsr1	100	99.520	ENSORLG00000004926	tsr1	100	99.520	Oryzias_latipes
ENSORLG00020008792	tsr1	100	99.400	ENSORLG00015013838	tsr1	100	99.400	Oryzias_latipes_hsok
ENSORLG00020008792	tsr1	100	94.026	ENSOMEG00000004830	tsr1	100	93.309	Oryzias_melastigma
ENSORLG00020008792	tsr1	99	54.708	ENSOGAG00000004492	TSR1	99	54.167	Otolemur_garnettii
ENSORLG00020008792	tsr1	99	55.985	ENSOARG00000015437	TSR1	97	55.168	Ovis_aries
ENSORLG00020008792	tsr1	99	54.022	ENSPPAG00000036355	TSR1	99	54.324	Pan_paniscus
ENSORLG00020008792	tsr1	99	54.600	ENSPPRG00000015519	-	99	53.855	Panthera_pardus
ENSORLG00020008792	tsr1	99	54.600	ENSPTIG00000010608	TSR1	99	53.855	Panthera_tigris_altaica
ENSORLG00020008792	tsr1	99	54.022	ENSPTRG00000008547	TSR1	99	54.324	Pan_troglodytes
ENSORLG00020008792	tsr1	97	51.766	ENSPANG00000024463	TSR1	98	51.711	Papio_anubis
ENSORLG00020008792	tsr1	99	71.497	ENSPKIG00000013972	tsr1	100	70.778	Paramormyrops_kingsleyae
ENSORLG00020008792	tsr1	84	56.841	ENSPSIG00000018258	TSR1	98	56.067	Pelodiscus_sinensis
ENSORLG00020008792	tsr1	99	79.157	ENSPMGG00000011577	tsr1	99	78.649	Periophthalmus_magnuspinnatus
ENSORLG00020008792	tsr1	99	53.446	ENSPEMG00000018033	Tsr1	99	52.892	Peromyscus_maniculatus_bairdii
ENSORLG00020008792	tsr1	98	55.889	ENSPCIG00000009357	TSR1	97	55.516	Phascolarctos_cinereus
ENSORLG00020008792	tsr1	99	80.889	ENSPFOG00000004483	TSR1	100	81.250	Poecilia_formosa
ENSORLG00020008792	tsr1	100	81.764	ENSPLAG00000022320	tsr1	100	82.241	Poecilia_latipinna
ENSORLG00020008792	tsr1	100	82.002	ENSPMEG00000004577	tsr1	100	82.718	Poecilia_mexicana
ENSORLG00020008792	tsr1	97	82.945	ENSPREG00000010354	tsr1	96	82.475	Poecilia_reticulata
ENSORLG00020008792	tsr1	99	49.163	ENSPPYG00000007792	TSR1	99	48.970	Pongo_abelii
ENSORLG00020008792	tsr1	51	65.116	ENSPCAG00000012973	-	69	66.667	Procavia_capensis
ENSORLG00020008792	tsr1	99	56.106	ENSPCOG00000017928	TSR1	99	54.897	Propithecus_coquereli
ENSORLG00020008792	tsr1	99	55.060	ENSPVAG00000002162	TSR1	99	54.217	Pteropus_vampyrus
ENSORLG00020008792	tsr1	100	84.928	ENSPNYG00000016163	tsr1	100	85.167	Pundamilia_nyererei
ENSORLG00020008792	tsr1	99	74.524	ENSPNAG00000008659	tsr1	100	74.405	Pygocentrus_nattereri
ENSORLG00020008792	tsr1	99	54.327	ENSRNOG00000002980	Tsr1	99	53.357	Rattus_norvegicus
ENSORLG00020008792	tsr1	97	55.189	ENSRBIG00000040016	TSR1	98	54.136	Rhinopithecus_bieti
ENSORLG00020008792	tsr1	97	55.067	ENSRROG00000030361	TSR1	98	54.015	Rhinopithecus_roxellana
ENSORLG00020008792	tsr1	95	31.242	YDL060W	-	98	30.440	Saccharomyces_cerevisiae
ENSORLG00020008792	tsr1	97	55.177	ENSSBOG00000020785	TSR1	99	54.811	Saimiri_boliviensis_boliviensis
ENSORLG00020008792	tsr1	98	55.342	ENSSHAG00000011394	TSR1	99	55.582	Sarcophilus_harrisii
ENSORLG00020008792	tsr1	99	73.887	ENSSFOG00015005455	tsr1	100	73.646	Scleropages_formosus
ENSORLG00020008792	tsr1	99	82.374	ENSSMAG00000009504	tsr1	100	82.494	Scophthalmus_maximus
ENSORLG00020008792	tsr1	100	84.845	ENSSDUG00000012074	tsr1	100	84.845	Seriola_dumerili
ENSORLG00020008792	tsr1	100	84.928	ENSSLDG00000002031	tsr1	100	84.928	Seriola_lalandi_dorsalis
ENSORLG00020008792	tsr1	92	56.400	ENSSARG00000000759	TSR1	93	56.400	Sorex_araneus
ENSORLG00020008792	tsr1	99	56.770	ENSSPUG00000007042	TSR1	99	56.325	Sphenodon_punctatus
ENSORLG00020008792	tsr1	99	83.751	ENSSPAG00000021951	tsr1	100	84.468	Stegastes_partitus
ENSORLG00020008792	tsr1	98	56.265	ENSSSCG00000038534	TSR1	99	55.288	Sus_scrofa
ENSORLG00020008792	tsr1	89	61.406	ENSTGUG00000005883	TSR1	100	60.554	Taeniopygia_guttata
ENSORLG00020008792	tsr1	99	80.385	ENSTRUG00000004665	tsr1	100	80.505	Takifugu_rubripes
ENSORLG00020008792	tsr1	99	80.461	ENSTNIG00000016196	tsr1	100	80.676	Tetraodon_nigroviridis
ENSORLG00020008792	tsr1	66	72.308	ENSTBEG00000015275	-	66	72.308	Tupaia_belangeri
ENSORLG00020008792	tsr1	99	56.348	ENSTTRG00000001177	TSR1	99	55.260	Tursiops_truncatus
ENSORLG00020008792	tsr1	99	54.237	ENSUAMG00000025160	TSR1	99	53.623	Ursus_americanus
ENSORLG00020008792	tsr1	95	54.208	ENSUMAG00000009294	TSR1	98	53.442	Ursus_maritimus
ENSORLG00020008792	tsr1	83	49.282	ENSVPAG00000000228	TSR1	99	48.429	Vicugna_pacos
ENSORLG00020008792	tsr1	99	54.556	ENSVVUG00000021767	TSR1	99	53.966	Vulpes_vulpes
ENSORLG00020008792	tsr1	99	53.499	ENSXETG00000023797	tsr1	100	53.191	Xenopus_tropicalis
ENSORLG00020008792	tsr1	99	80.552	ENSXCOG00000009635	tsr1	100	80.409	Xiphophorus_couchianus
ENSORLG00020008792	tsr1	100	81.796	ENSXMAG00000001397	tsr1	97	81.677	Xiphophorus_maculatus