EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020008991 (Gene tree)
Gene ID: -
Gene Symbol: rabl3
Alias: -
Full Name: RAB%2C member of RAS oncogene family-like 3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5125 bases
Position: chr21:28153073-28158197
Accession: ZDB-GENE-040808-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020008087	MMR_HSR1	PF01926.23	8.7e-06	1	1
ENSORLP00020008098	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020001756	-	3267	-	ENSORLP00020008098	264 (aa)	-	-
ENSORLT00020001777	-	669	-	ENSORLP00020008087	222 (aa)	-	-

Gene Model

Click here to download ENSORLG00020008991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020008991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020008991	rabl3	57	32.824	ENSORLG00020012685	zgc:101559	52	32.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020008991	rabl3	100	81.780	ENSG00000144840	RABL3	100	93.023	Homo_sapiens
ENSORLG00020008991	rabl3	100	90.171	ENSAPOG00000024479	rabl3	100	94.872	Acanthochromis_polyacanthus
ENSORLG00020008991	rabl3	100	82.627	ENSAMEG00000004809	RABL3	100	85.593	Ailuropoda_melanoleuca
ENSORLG00020008991	rabl3	100	91.667	ENSACIG00000014343	rabl3	100	91.667	Amphilophus_citrinellus
ENSORLG00020008991	rabl3	100	90.171	ENSAOCG00000011851	rabl3	100	94.872	Amphiprion_ocellaris
ENSORLG00020008991	rabl3	100	90.171	ENSAPEG00000011214	rabl3	100	94.872	Amphiprion_percula
ENSORLG00020008991	rabl3	100	94.667	ENSATEG00000003503	rabl3	100	95.279	Anabas_testudineus
ENSORLG00020008991	rabl3	100	78.390	ENSACAG00000011313	-	100	81.356	Anolis_carolinensis
ENSORLG00020008991	rabl3	100	83.898	ENSANAG00000027278	RABL3	100	86.864	Aotus_nancymaae
ENSORLG00020008991	rabl3	100	90.558	ENSACLG00000009820	rabl3	100	95.279	Astatotilapia_calliptera
ENSORLG00020008991	rabl3	100	87.124	ENSAMXG00000038716	rabl3	100	91.845	Astyanax_mexicanus
ENSORLG00020008991	rabl3	100	83.475	ENSBTAG00000015898	RABL3	100	86.864	Bos_taurus
ENSORLG00020008991	rabl3	100	83.898	ENSCJAG00000008611	RABL3	100	86.864	Callithrix_jacchus
ENSORLG00020008991	rabl3	100	83.475	ENSCAFG00000011292	RABL3	90	86.134	Canis_familiaris
ENSORLG00020008991	rabl3	100	83.475	ENSCAFG00020006397	RABL3	100	86.441	Canis_lupus_dingo
ENSORLG00020008991	rabl3	100	83.475	ENSCHIG00000017365	RABL3	100	86.864	Capra_hircus
ENSORLG00020008991	rabl3	100	82.203	ENSCPOG00000009645	RABL3	100	85.169	Cavia_porcellus
ENSORLG00020008991	rabl3	100	82.203	ENSCATG00000032561	RABL3	100	85.169	Cercocebus_atys
ENSORLG00020008991	rabl3	100	81.780	ENSCLAG00000010855	RABL3	100	84.746	Chinchilla_lanigera
ENSORLG00020008991	rabl3	99	81.974	ENSCSAG00000007155	RABL3	100	84.979	Chlorocebus_sabaeus
ENSORLG00020008991	rabl3	100	83.475	ENSCPBG00000001999	RABL3	100	86.441	Chrysemys_picta_bellii
ENSORLG00020008991	rabl3	100	82.203	ENSCANG00000031684	RABL3	100	85.169	Colobus_angolensis_palliatus
ENSORLG00020008991	rabl3	100	79.661	ENSCGRG00001021537	Rabl3	100	82.627	Cricetulus_griseus_chok1gshd
ENSORLG00020008991	rabl3	100	79.661	ENSCGRG00000002114	Rabl3	100	82.627	Cricetulus_griseus_crigri
ENSORLG00020008991	rabl3	100	85.135	ENSCSEG00000014982	rabl3	100	85.135	Cynoglossus_semilaevis
ENSORLG00020008991	rabl3	100	81.982	ENSCVAG00000009904	rabl3	100	81.982	Cyprinodon_variegatus
ENSORLG00020008991	rabl3	100	87.554	ENSDARG00000040959	rabl3	100	92.275	Danio_rerio
ENSORLG00020008991	rabl3	100	82.203	ENSDNOG00000008174	RABL3	100	85.169	Dasypus_novemcinctus
ENSORLG00020008991	rabl3	100	80.932	ENSETEG00000010206	RABL3	100	83.898	Echinops_telfairi
ENSORLG00020008991	rabl3	100	83.475	ENSECAG00000023059	RABL3	100	86.864	Equus_caballus
ENSORLG00020008991	rabl3	100	77.542	ENSEEUG00000002897	RABL3	100	80.932	Erinaceus_europaeus
ENSORLG00020008991	rabl3	100	87.124	ENSELUG00000014758	rabl3	100	91.845	Esox_lucius
ENSORLG00020008991	rabl3	100	83.475	ENSFCAG00000031879	RABL3	100	77.778	Felis_catus
ENSORLG00020008991	rabl3	100	81.356	ENSFALG00000005296	RABL3	100	84.322	Ficedula_albicollis
ENSORLG00020008991	rabl3	100	82.553	ENSFDAG00000000307	RABL3	100	85.532	Fukomys_damarensis
ENSORLG00020008991	rabl3	100	87.983	ENSFHEG00000011273	rabl3	100	91.845	Fundulus_heteroclitus
ENSORLG00020008991	rabl3	100	89.700	ENSGMOG00000007845	rabl3	100	93.991	Gadus_morhua
ENSORLG00020008991	rabl3	100	82.203	ENSGALG00000014949	RABL3	100	85.593	Gallus_gallus
ENSORLG00020008991	rabl3	100	86.266	ENSGAFG00000015953	rabl3	100	90.558	Gambusia_affinis
ENSORLG00020008991	rabl3	100	87.554	ENSGACG00000007387	rabl3	100	93.023	Gasterosteus_aculeatus
ENSORLG00020008991	rabl3	100	83.898	ENSGAGG00000003677	RABL3	100	86.864	Gopherus_agassizii
ENSORLG00020008991	rabl3	100	81.780	ENSGGOG00000006059	RABL3	100	84.746	Gorilla_gorilla
ENSORLG00020008991	rabl3	100	90.987	ENSHBUG00000019478	rabl3	93	95.708	Haplochromis_burtoni
ENSORLG00020008991	rabl3	100	82.128	ENSHGLG00000014491	RABL3	100	85.532	Heterocephalus_glaber_female
ENSORLG00020008991	rabl3	100	82.128	ENSHGLG00100004866	RABL3	100	85.532	Heterocephalus_glaber_male
ENSORLG00020008991	rabl3	100	84.234	ENSHCOG00000019245	rabl3	100	84.234	Hippocampus_comes
ENSORLG00020008991	rabl3	100	86.695	ENSIPUG00000012657	rabl3	100	90.558	Ictalurus_punctatus
ENSORLG00020008991	rabl3	100	82.203	ENSSTOG00000019452	RABL3	100	84.746	Ictidomys_tridecemlineatus
ENSORLG00020008991	rabl3	100	76.444	ENSJJAG00000023553	Rabl3	100	76.444	Jaculus_jaculus
ENSORLG00020008991	rabl3	100	86.266	ENSKMAG00000015464	rabl3	100	90.558	Kryptolebias_marmoratus
ENSORLG00020008991	rabl3	100	93.694	ENSLBEG00000010627	-	100	94.017	Labrus_bergylta
ENSORLG00020008991	rabl3	100	93.694	ENSLBEG00000020595	rabl3	100	94.017	Labrus_bergylta
ENSORLG00020008991	rabl3	100	82.627	ENSLOCG00000006265	rabl3	100	86.441	Lepisosteus_oculatus
ENSORLG00020008991	rabl3	100	83.898	ENSLAFG00000003711	RABL3	100	86.441	Loxodonta_africana
ENSORLG00020008991	rabl3	100	82.203	ENSMFAG00000031923	RABL3	100	85.169	Macaca_fascicularis
ENSORLG00020008991	rabl3	100	76.444	ENSMMUG00000001594	RABL3	100	76.444	Macaca_mulatta
ENSORLG00020008991	rabl3	100	82.203	ENSMNEG00000043980	RABL3	100	85.169	Macaca_nemestrina
ENSORLG00020008991	rabl3	100	82.203	ENSMLEG00000028177	RABL3	100	85.169	Mandrillus_leucophaeus
ENSORLG00020008991	rabl3	100	89.700	ENSMAMG00000015155	rabl3	100	94.421	Mastacembelus_armatus
ENSORLG00020008991	rabl3	100	90.558	ENSMZEG00005002607	rabl3	100	95.279	Maylandia_zebra
ENSORLG00020008991	rabl3	100	79.661	ENSMAUG00000013022	Rabl3	100	82.627	Mesocricetus_auratus
ENSORLG00020008991	rabl3	100	83.051	ENSMICG00000049288	RABL3	100	86.017	Microcebus_murinus
ENSORLG00020008991	rabl3	100	79.661	ENSMOCG00000015237	Rabl3	100	82.203	Microtus_ochrogaster
ENSORLG00020008991	rabl3	100	91.667	ENSMMOG00000005628	rabl3	100	91.667	Mola_mola
ENSORLG00020008991	rabl3	100	81.356	ENSMODG00000018232	RABL3	100	85.169	Monodelphis_domestica
ENSORLG00020008991	rabl3	100	87.712	ENSMALG00000018837	rabl3	100	87.712	Monopterus_albus
ENSORLG00020008991	rabl3	100	79.661	MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	Mus_caroli
ENSORLG00020008991	rabl3	100	79.661	ENSMUSG00000022827	Rabl3	100	92.248	Mus_musculus
ENSORLG00020008991	rabl3	100	79.237	MGP_PahariEiJ_G0016429	Rabl3	100	92.248	Mus_pahari
ENSORLG00020008991	rabl3	100	79.661	MGP_SPRETEiJ_G0021628	Rabl3	100	92.248	Mus_spretus
ENSORLG00020008991	rabl3	100	83.475	ENSMPUG00000008257	RABL3	91	85.774	Mustela_putorius_furo
ENSORLG00020008991	rabl3	100	81.356	ENSMLUG00000014113	RABL3	100	84.746	Myotis_lucifugus
ENSORLG00020008991	rabl3	99	76.471	ENSNGAG00000001939	Rabl3	99	76.471	Nannospalax_galili
ENSORLG00020008991	rabl3	91	97.044	ENSNBRG00000012423	rabl3	94	94.545	Neolamprologus_brichardi
ENSORLG00020008991	rabl3	100	81.780	ENSNLEG00000031723	RABL3	100	84.746	Nomascus_leucogenys
ENSORLG00020008991	rabl3	100	81.780	ENSMEUG00000006606	RABL3	100	85.169	Notamacropus_eugenii
ENSORLG00020008991	rabl3	100	81.780	ENSODEG00000004758	-	100	84.746	Octodon_degus
ENSORLG00020008991	rabl3	100	91.416	ENSONIG00000004281	rabl3	100	96.137	Oreochromis_niloticus
ENSORLG00020008991	rabl3	99	80.769	ENSOANG00000003928	RABL3	99	84.188	Ornithorhynchus_anatinus
ENSORLG00020008991	rabl3	100	94.850	ENSORLG00000020457	rabl3	100	100.000	Oryzias_latipes
ENSORLG00020008991	rabl3	100	98.864	ENSORLG00015005649	rabl3	100	98.864	Oryzias_latipes_hsok
ENSORLG00020008991	rabl3	100	98.198	ENSOMEG00000015066	rabl3	100	98.712	Oryzias_melastigma
ENSORLG00020008991	rabl3	100	83.051	ENSOGAG00000005961	RABL3	100	86.017	Otolemur_garnettii
ENSORLG00020008991	rabl3	100	83.475	ENSOARG00000019939	RABL3	100	86.864	Ovis_aries
ENSORLG00020008991	rabl3	94	80.180	ENSPPAG00000036997	RABL3	87	83.333	Pan_paniscus
ENSORLG00020008991	rabl3	100	83.475	ENSPPRG00000016325	RABL3	100	86.441	Panthera_pardus
ENSORLG00020008991	rabl3	100	83.475	ENSPTIG00000018021	RABL3	100	86.441	Panthera_tigris_altaica
ENSORLG00020008991	rabl3	100	81.780	ENSPTRG00000015272	RABL3	100	84.746	Pan_troglodytes
ENSORLG00020008991	rabl3	100	82.203	ENSPANG00000001339	RABL3	100	85.169	Papio_anubis
ENSORLG00020008991	rabl3	100	87.983	ENSPKIG00000007818	rabl3	100	91.416	Paramormyrops_kingsleyae
ENSORLG00020008991	rabl3	100	83.051	ENSPSIG00000011358	RABL3	100	86.017	Pelodiscus_sinensis
ENSORLG00020008991	rabl3	100	95.495	ENSPMGG00000015794	rabl3	100	95.495	Periophthalmus_magnuspinnatus
ENSORLG00020008991	rabl3	100	79.661	ENSPEMG00000016913	Rabl3	100	82.627	Peromyscus_maniculatus_bairdii
ENSORLG00020008991	rabl3	100	81.780	ENSPCIG00000018922	RABL3	100	85.169	Phascolarctos_cinereus
ENSORLG00020008991	rabl3	100	88.412	ENSPFOG00000008586	rabl3	100	92.704	Poecilia_formosa
ENSORLG00020008991	rabl3	100	88.412	ENSPLAG00000014482	rabl3	100	92.704	Poecilia_latipinna
ENSORLG00020008991	rabl3	100	88.412	ENSPMEG00000002295	rabl3	100	92.704	Poecilia_mexicana
ENSORLG00020008991	rabl3	100	87.983	ENSPREG00000014815	rabl3	100	92.275	Poecilia_reticulata
ENSORLG00020008991	rabl3	100	82.203	ENSPPYG00000013501	RABL3	100	85.169	Pongo_abelii
ENSORLG00020008991	rabl3	100	83.475	ENSPCOG00000022230	RABL3	100	86.441	Propithecus_coquereli
ENSORLG00020008991	rabl3	100	81.356	ENSPVAG00000010013	RABL3	100	84.746	Pteropus_vampyrus
ENSORLG00020008991	rabl3	100	90.987	ENSPNYG00000006659	rabl3	100	95.708	Pundamilia_nyererei
ENSORLG00020008991	rabl3	100	88.841	ENSPNAG00000000748	rabl3	100	93.562	Pygocentrus_nattereri
ENSORLG00020008991	rabl3	100	79.661	ENSRNOG00000026085	Rabl3	100	82.203	Rattus_norvegicus
ENSORLG00020008991	rabl3	100	82.203	ENSRBIG00000040941	RABL3	100	85.169	Rhinopithecus_bieti
ENSORLG00020008991	rabl3	100	82.203	ENSRROG00000043745	RABL3	100	85.169	Rhinopithecus_roxellana
ENSORLG00020008991	rabl3	100	83.898	ENSSBOG00000004022	RABL3	100	86.864	Saimiri_boliviensis_boliviensis
ENSORLG00020008991	rabl3	100	80.932	ENSSHAG00000012233	RABL3	100	84.322	Sarcophilus_harrisii
ENSORLG00020008991	rabl3	100	88.412	ENSSFOG00015010171	rabl3	100	91.416	Scleropages_formosus
ENSORLG00020008991	rabl3	100	89.316	ENSSMAG00000002403	rabl3	100	94.017	Scophthalmus_maximus
ENSORLG00020008991	rabl3	100	90.558	ENSSDUG00000012078	rabl3	100	95.279	Seriola_dumerili
ENSORLG00020008991	rabl3	100	90.558	ENSSLDG00000021899	rabl3	100	95.279	Seriola_lalandi_dorsalis
ENSORLG00020008991	rabl3	100	83.898	ENSSARG00000008316	RABL3	100	86.864	Sorex_araneus
ENSORLG00020008991	rabl3	100	82.627	ENSSPUG00000017490	RABL3	100	86.441	Sphenodon_punctatus
ENSORLG00020008991	rabl3	100	93.805	ENSSPAG00000011642	rabl3	100	95.279	Stegastes_partitus
ENSORLG00020008991	rabl3	100	83.475	ENSSSCG00000035258	RABL3	100	86.864	Sus_scrofa
ENSORLG00020008991	rabl3	100	81.356	ENSTGUG00000013374	RABL3	100	84.746	Taeniopygia_guttata
ENSORLG00020008991	rabl3	84	90.000	ENSTRUG00000007846	RABL3	100	94.531	Takifugu_rubripes
ENSORLG00020008991	rabl3	100	70.339	ENSTBEG00000005153	RABL3	100	73.305	Tupaia_belangeri
ENSORLG00020008991	rabl3	100	82.627	ENSUAMG00000005299	RABL3	100	85.593	Ursus_americanus
ENSORLG00020008991	rabl3	100	82.627	ENSUMAG00000025256	RABL3	93	84.082	Ursus_maritimus
ENSORLG00020008991	rabl3	100	83.475	ENSVPAG00000003776	RABL3	100	86.864	Vicugna_pacos
ENSORLG00020008991	rabl3	100	83.475	ENSVVUG00000022300	RABL3	90	86.134	Vulpes_vulpes
ENSORLG00020008991	rabl3	100	87.554	ENSXMAG00000003244	rabl3	100	91.845	Xiphophorus_maculatus