EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020009138 (Gene tree)
Gene ID: -
Gene Symbol: srp72
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 11064 bases
Position: chr10:2923986-2935049
Accession: ZDB-GENE-030131-5546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020026570	SRP72	PF08492.12	1.5e-20	1	1
ENSORLP00020008191	SRP72	PF08492.12	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020001574	-	2025	-	ENSORLP00020026570	674 (aa)	-	-
ENSORLT00020001589	-	2171	-	ENSORLP00020008191	688 (aa)	-	-

Gene Model

Click here to download ENSORLG00020009138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020009138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020009138	srp72	96	73.579	ENSG00000174780	SRP72	99	73.763	Homo_sapiens
ENSORLG00020009138	srp72	98	77.828	ENSAPOG00000019438	srp72	99	76.241	Acanthochromis_polyacanthus
ENSORLG00020009138	srp72	95	73.872	ENSAMEG00000008469	SRP72	99	75.261	Ailuropoda_melanoleuca
ENSORLG00020009138	srp72	97	87.164	ENSACIG00000000488	srp72	100	86.269	Amphilophus_citrinellus
ENSORLG00020009138	srp72	97	87.406	ENSAOCG00000011256	srp72	100	87.126	Amphiprion_ocellaris
ENSORLG00020009138	srp72	97	87.874	ENSAPEG00000001512	srp72	100	86.976	Amphiprion_percula
ENSORLG00020009138	srp72	89	88.744	ENSATEG00000006781	srp72	99	88.455	Anabas_testudineus
ENSORLG00020009138	srp72	98	73.802	ENSAPLG00000008751	SRP72	98	75.455	Anas_platyrhynchos
ENSORLG00020009138	srp72	94	75.347	ENSACAG00000002381	SRP72	98	74.141	Anolis_carolinensis
ENSORLG00020009138	srp72	95	72.939	ENSANAG00000020836	-	99	73.485	Aotus_nancymaae
ENSORLG00020009138	srp72	97	88.473	ENSACLG00000014617	srp72	100	87.575	Astatotilapia_calliptera
ENSORLG00020009138	srp72	98	79.129	ENSAMXG00000004011	srp72	100	80.510	Astyanax_mexicanus
ENSORLG00020009138	srp72	96	73.118	ENSBTAG00000010593	SRP72	99	74.663	Bos_taurus
ENSORLG00020009138	srp72	96	73.118	ENSCJAG00000017998	SRP72	99	73.485	Callithrix_jacchus
ENSORLG00020009138	srp72	96	73.733	ENSCAFG00000002244	SRP72	99	75.412	Canis_familiaris
ENSORLG00020009138	srp72	96	73.733	ENSCAFG00020027338	SRP72	98	75.986	Canis_lupus_dingo
ENSORLG00020009138	srp72	96	72.462	ENSCHIG00000021465	SRP72	99	73.123	Capra_hircus
ENSORLG00020009138	srp72	94	75.232	ENSTSYG00000010571	-	100	73.412	Carlito_syrichta
ENSORLG00020009138	srp72	71	67.016	ENSCAPG00000016668	SRP72	100	61.868	Cavia_aperea
ENSORLG00020009138	srp72	96	73.272	ENSCPOG00000000218	SRP72	99	73.313	Cavia_porcellus
ENSORLG00020009138	srp72	96	71.495	ENSCCAG00000030830	-	99	71.622	Cebus_capucinus
ENSORLG00020009138	srp72	95	72.897	ENSCCAG00000030683	-	91	75.530	Cebus_capucinus
ENSORLG00020009138	srp72	95	59.112	ENSCATG00000045359	-	96	58.806	Cercocebus_atys
ENSORLG00020009138	srp72	96	73.425	ENSCATG00000008072	SRP72	99	73.613	Cercocebus_atys
ENSORLG00020009138	srp72	96	73.272	ENSCLAG00000003571	SRP72	99	73.463	Chinchilla_lanigera
ENSORLG00020009138	srp72	96	69.785	ENSCSAG00000005079	SRP72	99	70.060	Chlorocebus_sabaeus
ENSORLG00020009138	srp72	87	74.561	ENSCHOG00000013240	SRP72	89	74.561	Choloepus_hoffmanni
ENSORLG00020009138	srp72	95	73.717	ENSCPBG00000015015	SRP72	99	73.653	Chrysemys_picta_bellii
ENSORLG00020009138	srp72	94	41.902	ENSCING00000002417	-	98	41.263	Ciona_intestinalis
ENSORLG00020009138	srp72	91	41.358	ENSCSAVG00000011288	-	98	40.413	Ciona_savignyi
ENSORLG00020009138	srp72	96	73.425	ENSCANG00000041709	SRP72	99	73.613	Colobus_angolensis_palliatus
ENSORLG00020009138	srp72	98	49.325	ENSCANG00000037920	-	98	50.000	Colobus_angolensis_palliatus
ENSORLG00020009138	srp72	98	73.763	ENSCGRG00001013548	Srp72	99	75.505	Cricetulus_griseus_chok1gshd
ENSORLG00020009138	srp72	93	73.975	ENSCGRG00000003013	Srp72	99	75.505	Cricetulus_griseus_crigri
ENSORLG00020009138	srp72	97	85.180	ENSCSEG00000003616	srp72	100	84.880	Cynoglossus_semilaevis
ENSORLG00020009138	srp72	89	89.819	ENSCVAG00000001520	srp72	100	89.819	Cyprinodon_variegatus
ENSORLG00020009138	srp72	84	78.421	ENSDARG00000014139	srp72	99	79.461	Danio_rerio
ENSORLG00020009138	srp72	96	69.939	ENSDNOG00000039012	SRP72	84	69.706	Dasypus_novemcinctus
ENSORLG00020009138	srp72	95	73.178	ENSDORG00000000171	Srp72	99	73.163	Dipodomys_ordii
ENSORLG00020009138	srp72	94	39.002	FBgn0038810	Srp72	98	39.389	Drosophila_melanogaster
ENSORLG00020009138	srp72	95	73.872	ENSETEG00000005191	SRP72	99	73.913	Echinops_telfairi
ENSORLG00020009138	srp72	71	62.602	ENSEBUG00000003696	srp72	97	62.857	Eptatretus_burgeri
ENSORLG00020009138	srp72	96	73.733	ENSEASG00005017747	SRP72	99	73.913	Equus_asinus_asinus
ENSORLG00020009138	srp72	96	73.733	ENSECAG00000006920	SRP72	99	73.763	Equus_caballus
ENSORLG00020009138	srp72	97	81.575	ENSELUG00000022415	srp72	100	80.981	Esox_lucius
ENSORLG00020009138	srp72	94	74.923	ENSFCAG00000027600	SRP72	100	73.067	Felis_catus
ENSORLG00020009138	srp72	95	75.389	ENSFALG00000006713	SRP72	99	76.312	Ficedula_albicollis
ENSORLG00020009138	srp72	96	73.385	ENSFDAG00000002014	-	99	73.163	Fukomys_damarensis
ENSORLG00020009138	srp72	96	47.678	ENSFDAG00000009793	-	95	47.312	Fukomys_damarensis
ENSORLG00020009138	srp72	97	87.743	ENSFHEG00000017652	srp72	92	87.444	Fundulus_heteroclitus
ENSORLG00020009138	srp72	97	78.176	ENSGMOG00000005986	srp72	98	78.506	Gadus_morhua
ENSORLG00020009138	srp72	95	75.039	ENSGALG00000011403	SRP72	99	76.126	Gallus_gallus
ENSORLG00020009138	srp72	97	88.042	ENSGAFG00000017762	srp72	100	87.145	Gambusia_affinis
ENSORLG00020009138	srp72	97	84.454	ENSGACG00000016749	srp72	98	83.841	Gasterosteus_aculeatus
ENSORLG00020009138	srp72	87	74.030	ENSGAGG00000024611	SRP72	98	74.368	Gopherus_agassizii
ENSORLG00020009138	srp72	96	73.272	ENSGGOG00000013234	-	99	73.463	Gorilla_gorilla
ENSORLG00020009138	srp72	97	88.473	ENSHBUG00000020723	srp72	100	87.575	Haplochromis_burtoni
ENSORLG00020009138	srp72	96	68.510	ENSHGLG00000005029	-	99	68.216	Heterocephalus_glaber_female
ENSORLG00020009138	srp72	88	66.491	ENSHGLG00000010633	-	99	67.553	Heterocephalus_glaber_female
ENSORLG00020009138	srp72	95	57.143	ENSHGLG00000018597	-	99	58.220	Heterocephalus_glaber_female
ENSORLG00020009138	srp72	83	68.444	ENSHGLG00000003950	-	99	68.444	Heterocephalus_glaber_female
ENSORLG00020009138	srp72	96	73.344	ENSHGLG00000009791	SRP72	99	73.313	Heterocephalus_glaber_female
ENSORLG00020009138	srp72	50	59.226	ENSHGLG00000003496	-	98	56.232	Heterocephalus_glaber_female
ENSORLG00020009138	srp72	90	57.990	ENSHGLG00100009346	-	99	56.757	Heterocephalus_glaber_male
ENSORLG00020009138	srp72	96	68.510	ENSHGLG00100011236	-	99	68.216	Heterocephalus_glaber_male
ENSORLG00020009138	srp72	83	68.000	ENSHGLG00100017133	-	99	68.000	Heterocephalus_glaber_male
ENSORLG00020009138	srp72	96	73.344	ENSHGLG00100009021	SRP72	99	73.313	Heterocephalus_glaber_male
ENSORLG00020009138	srp72	97	84.535	ENSHCOG00000013760	srp72	100	84.535	Hippocampus_comes
ENSORLG00020009138	srp72	97	80.960	ENSIPUG00000000210	srp72	100	80.960	Ictalurus_punctatus
ENSORLG00020009138	srp72	96	73.733	ENSSTOG00000007305	SRP72	99	73.763	Ictidomys_tridecemlineatus
ENSORLG00020009138	srp72	94	74.219	ENSJJAG00000018324	Srp72	99	73.485	Jaculus_jaculus
ENSORLG00020009138	srp72	95	87.805	ENSKMAG00000003776	srp72	100	86.697	Kryptolebias_marmoratus
ENSORLG00020009138	srp72	95	81.595	ENSLOCG00000002628	srp72	97	81.651	Lepisosteus_oculatus
ENSORLG00020009138	srp72	96	73.272	ENSLAFG00000018307	SRP72	99	73.613	Loxodonta_africana
ENSORLG00020009138	srp72	96	73.425	ENSMFAG00000031065	SRP72	99	73.613	Macaca_fascicularis
ENSORLG00020009138	srp72	95	60.031	ENSMFAG00000037164	-	97	60.465	Macaca_fascicularis
ENSORLG00020009138	srp72	95	74.504	ENSMMUG00000016368	SRP72	99	73.232	Macaca_mulatta
ENSORLG00020009138	srp72	84	65.909	ENSMMUG00000021262	-	96	65.909	Macaca_mulatta
ENSORLG00020009138	srp72	96	73.425	ENSMNEG00000038065	-	99	73.613	Macaca_nemestrina
ENSORLG00020009138	srp72	95	71.695	ENSMLEG00000030140	-	91	73.616	Mandrillus_leucophaeus
ENSORLG00020009138	srp72	97	86.677	ENSMAMG00000014989	srp72	88	85.778	Mastacembelus_armatus
ENSORLG00020009138	srp72	97	88.473	ENSMZEG00005003325	srp72	100	87.575	Maylandia_zebra
ENSORLG00020009138	srp72	93	71.451	ENSMGAG00000008567	SRP72	100	75.375	Meleagris_gallopavo
ENSORLG00020009138	srp72	97	73.748	ENSMAUG00000001237	Srp72	100	75.253	Mesocricetus_auratus
ENSORLG00020009138	srp72	95	72.784	ENSMICG00000008507	-	91	75.407	Microcebus_murinus
ENSORLG00020009138	srp72	98	73.463	ENSMOCG00000020309	Srp72	99	75.253	Microtus_ochrogaster
ENSORLG00020009138	srp72	97	85.030	ENSMMOG00000002627	srp72	98	84.427	Mola_mola
ENSORLG00020009138	srp72	95	69.626	ENSMODG00000020697	SRP72	99	70.015	Monodelphis_domestica
ENSORLG00020009138	srp72	97	85.479	ENSMALG00000003747	srp72	100	84.768	Monopterus_albus
ENSORLG00020009138	srp72	98	73.613	MGP_CAROLIEiJ_G0027323	Srp72	99	74.963	Mus_caroli
ENSORLG00020009138	srp72	98	73.613	ENSMUSG00000036323	Srp72	99	74.963	Mus_musculus
ENSORLG00020009138	srp72	97	73.565	MGP_PahariEiJ_G0017103	Srp72	99	74.874	Mus_pahari
ENSORLG00020009138	srp72	98	73.613	MGP_SPRETEiJ_G0028317	Srp72	99	74.963	Mus_spretus
ENSORLG00020009138	srp72	95	73.872	ENSMPUG00000004828	SRP72	99	75.262	Mustela_putorius_furo
ENSORLG00020009138	srp72	95	73.602	ENSMLUG00000007344	SRP72	99	75.000	Myotis_lucifugus
ENSORLG00020009138	srp72	98	73.613	ENSNGAG00000012595	Srp72	100	73.472	Nannospalax_galili
ENSORLG00020009138	srp72	97	84.880	ENSNBRG00000014492	srp72	100	83.982	Neolamprologus_brichardi
ENSORLG00020009138	srp72	94	69.290	ENSNLEG00000008806	-	99	68.216	Nomascus_leucogenys
ENSORLG00020009138	srp72	97	63.982	ENSMEUG00000005164	SRP72	90	72.709	Notamacropus_eugenii
ENSORLG00020009138	srp72	94	73.281	ENSOPRG00000012521	SRP72	99	73.013	Ochotona_princeps
ENSORLG00020009138	srp72	95	71.851	ENSODEG00000012214	SRP72	100	71.833	Octodon_degus
ENSORLG00020009138	srp72	97	88.473	ENSONIG00000001446	srp72	99	87.575	Oreochromis_niloticus
ENSORLG00020009138	srp72	94	59.043	ENSOANG00000008562	SRP72	97	59.940	Ornithorhynchus_anatinus
ENSORLG00020009138	srp72	95	73.765	ENSOCUG00000012226	SRP72	99	73.613	Oryctolagus_cuniculus
ENSORLG00020009138	srp72	97	99.250	ENSORLG00000020418	srp72	100	99.250	Oryzias_latipes
ENSORLG00020009138	srp72	97	99.250	ENSORLG00015018251	srp72	100	99.250	Oryzias_latipes_hsok
ENSORLG00020009138	srp72	97	94.753	ENSOMEG00000022008	srp72	100	95.952	Oryzias_melastigma
ENSORLG00020009138	srp72	96	74.040	ENSOGAG00000003578	SRP72	99	74.513	Otolemur_garnettii
ENSORLG00020009138	srp72	96	73.118	ENSOARG00000004329	SRP72	99	74.663	Ovis_aries
ENSORLG00020009138	srp72	81	57.952	ENSPPAG00000032490	-	90	58.692	Pan_paniscus
ENSORLG00020009138	srp72	96	73.579	ENSPPAG00000042265	SRP72	99	73.763	Pan_paniscus
ENSORLG00020009138	srp72	97	51.740	ENSPPAG00000011428	-	96	52.888	Pan_paniscus
ENSORLG00020009138	srp72	95	73.872	ENSPPRG00000015991	SRP72	100	74.069	Panthera_pardus
ENSORLG00020009138	srp72	95	73.872	ENSPTIG00000018786	SRP72	100	74.069	Panthera_tigris_altaica
ENSORLG00020009138	srp72	96	73.579	ENSPTRG00000048466	-	99	73.763	Pan_troglodytes
ENSORLG00020009138	srp72	97	53.404	ENSPTRG00000048100	-	96	54.863	Pan_troglodytes
ENSORLG00020009138	srp72	79	58.724	ENSPTRG00000043609	-	95	57.193	Pan_troglodytes
ENSORLG00020009138	srp72	93	58.136	ENSPANG00000030230	-	98	59.335	Papio_anubis
ENSORLG00020009138	srp72	96	73.425	ENSPANG00000005495	SRP72	99	73.613	Papio_anubis
ENSORLG00020009138	srp72	91	74.441	ENSPSIG00000003003	SRP72	100	73.520	Pelodiscus_sinensis
ENSORLG00020009138	srp72	97	73.596	ENSPEMG00000012828	-	99	75.000	Peromyscus_maniculatus_bairdii
ENSORLG00020009138	srp72	94	73.839	ENSPCIG00000000732	SRP72	99	72.864	Phascolarctos_cinereus
ENSORLG00020009138	srp72	98	86.677	ENSPFOG00000003480	srp72	100	88.042	Poecilia_formosa
ENSORLG00020009138	srp72	98	86.826	ENSPLAG00000020122	srp72	100	87.743	Poecilia_latipinna
ENSORLG00020009138	srp72	98	86.228	ENSPMEG00000019988	srp72	100	87.593	Poecilia_mexicana
ENSORLG00020009138	srp72	98	86.078	ENSPREG00000006218	srp72	100	86.996	Poecilia_reticulata
ENSORLG00020009138	srp72	56	59.948	ENSPPYG00000009152	-	96	59.585	Pongo_abelii
ENSORLG00020009138	srp72	96	73.425	ENSPPYG00000014752	-	78	73.621	Pongo_abelii
ENSORLG00020009138	srp72	96	72.043	ENSPVAG00000005590	SRP72	99	73.763	Pteropus_vampyrus
ENSORLG00020009138	srp72	97	88.323	ENSPNYG00000001916	srp72	100	87.425	Pundamilia_nyererei
ENSORLG00020009138	srp72	95	81.804	ENSPNAG00000022424	srp72	100	81.709	Pygocentrus_nattereri
ENSORLG00020009138	srp72	98	72.264	ENSRNOG00000002100	LOC108348180	99	73.613	Rattus_norvegicus
ENSORLG00020009138	srp72	98	55.873	ENSRBIG00000029328	-	98	58.276	Rhinopithecus_bieti
ENSORLG00020009138	srp72	96	68.923	ENSRBIG00000042069	SRP72	99	69.069	Rhinopithecus_bieti
ENSORLG00020009138	srp72	96	73.425	ENSRROG00000035704	SRP72	99	73.613	Rhinopithecus_roxellana
ENSORLG00020009138	srp72	94	72.414	ENSSHAG00000000614	SRP72	99	70.343	Sarcophilus_harrisii
ENSORLG00020009138	srp72	97	82.159	ENSSFOG00015002026	srp72	100	82.159	Scleropages_formosus
ENSORLG00020009138	srp72	95	85.866	ENSSMAG00000007639	srp72	98	85.562	Scophthalmus_maximus
ENSORLG00020009138	srp72	97	87.725	ENSSDUG00000007345	srp72	99	86.033	Seriola_dumerili
ENSORLG00020009138	srp72	98	87.068	ENSSLDG00000021819	srp72	98	87.126	Seriola_lalandi_dorsalis
ENSORLG00020009138	srp72	73	73.560	ENSSARG00000005804	SRP72	76	71.859	Sorex_araneus
ENSORLG00020009138	srp72	95	74.299	ENSSPUG00000009740	SRP72	97	75.573	Sphenodon_punctatus
ENSORLG00020009138	srp72	97	89.072	ENSSPAG00000011565	srp72	100	88.323	Stegastes_partitus
ENSORLG00020009138	srp72	97	71.752	ENSSSCG00000008900	SRP72	99	72.714	Sus_scrofa
ENSORLG00020009138	srp72	95	75.272	ENSTGUG00000004767	SRP72	99	76.048	Taeniopygia_guttata
ENSORLG00020009138	srp72	97	85.586	ENSTRUG00000009831	srp72	100	85.586	Takifugu_rubripes
ENSORLG00020009138	srp72	97	86.527	ENSTNIG00000013073	srp72	99	85.629	Tetraodon_nigroviridis
ENSORLG00020009138	srp72	94	53.917	ENSTBEG00000007394	SRP72	99	53.823	Tupaia_belangeri
ENSORLG00020009138	srp72	90	74.272	ENSTTRG00000010945	SRP72	100	74.921	Tursiops_truncatus
ENSORLG00020009138	srp72	57	74.479	ENSUAMG00000001701	SRP72	100	75.263	Ursus_americanus
ENSORLG00020009138	srp72	95	73.717	ENSUMAG00000008151	SRP72	100	75.112	Ursus_maritimus
ENSORLG00020009138	srp72	96	72.043	ENSVPAG00000000458	SRP72	99	73.913	Vicugna_pacos
ENSORLG00020009138	srp72	96	73.579	ENSVVUG00000006020	SRP72	99	75.262	Vulpes_vulpes
ENSORLG00020009138	srp72	93	71.024	ENSXETG00000010205	srp72	100	71.429	Xenopus_tropicalis
ENSORLG00020009138	srp72	98	85.778	ENSXMAG00000018000	srp72	99	86.377	Xiphophorus_maculatus