EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020009362 (Gene tree)
Gene ID: -
Gene Symbol: matr3l1.1
Alias: -
Full Name: matrin-3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 13803 bases
Position: chr10:2678859-2692661
Accession: 101164288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020008405	RRM_1	PF00076.22	5.8e-11	1	1
ENSORLP00020008441	RRM_1	PF00076.22	7.9e-11	1	1
ENSORLP00020008464	RRM_1	PF00076.22	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020001221	-	3968	-	ENSORLP00020008405	989 (aa)	-	-
ENSORLT00020001175	-	3512	XM_020701747	ENSORLP00020008441	1082 (aa)	XP_020557406	-
ENSORLT00020001139	-	3854	-	ENSORLP00020008464	1196 (aa)	-	-

Gene Model

Click here to download ENSORLG00020009362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020009362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020009362	matr3l1.1	63	40.678	ENSORLG00020009274	-	54	40.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020009362	matr3l1.1	81	33.333	ENSG00000015479	MATR3	99	35.088	Homo_sapiens
ENSORLG00020009362	matr3l1.1	80	38.686	ENSAMEG00000011347	-	66	37.956	Ailuropoda_melanoleuca
ENSORLG00020009362	matr3l1.1	85	35.032	ENSAPLG00000008118	-	76	36.170	Anas_platyrhynchos
ENSORLG00020009362	matr3l1.1	90	34.752	ENSACAG00000016233	-	69	55.556	Anolis_carolinensis
ENSORLG00020009362	matr3l1.1	78	37.037	ENSANAG00000022951	-	95	33.333	Aotus_nancymaae
ENSORLG00020009362	matr3l1.1	58	30.000	ENSANAG00000024654	-	74	30.000	Aotus_nancymaae
ENSORLG00020009362	matr3l1.1	69	50.058	ENSACLG00000015903	matr3l1.1	91	59.681	Astatotilapia_calliptera
ENSORLG00020009362	matr3l1.1	99	45.877	ENSAMXG00000010681	matr3l1.1	99	45.487	Astyanax_mexicanus
ENSORLG00020009362	matr3l1.1	99	45.770	ENSAMXG00000010685	matr3l1.1	99	44.651	Astyanax_mexicanus
ENSORLG00020009362	matr3l1.1	76	33.333	ENSBTAG00000006756	MATR3	55	34.444	Bos_taurus
ENSORLG00020009362	matr3l1.1	79	38.686	ENSCJAG00000006888	-	71	37.121	Callithrix_jacchus
ENSORLG00020009362	matr3l1.1	80	37.778	ENSCAFG00000001345	MATR3	69	37.121	Canis_familiaris
ENSORLG00020009362	matr3l1.1	79	37.037	ENSCAFG00020010504	-	71	36.154	Canis_lupus_dingo
ENSORLG00020009362	matr3l1.1	80	33.333	ENSCHIG00000025746	-	69	37.879	Capra_hircus
ENSORLG00020009362	matr3l1.1	81	33.333	ENSTSYG00000011028	-	72	36.923	Carlito_syrichta
ENSORLG00020009362	matr3l1.1	80	33.333	ENSCPOG00000014076	-	63	46.341	Cavia_porcellus
ENSORLG00020009362	matr3l1.1	80	33.333	ENSCCAG00000025074	-	87	33.333	Cebus_capucinus
ENSORLG00020009362	matr3l1.1	63	33.333	ENSCATG00000041304	-	70	37.879	Cercocebus_atys
ENSORLG00020009362	matr3l1.1	80	33.333	ENSCLAG00000015998	-	69	37.121	Chinchilla_lanigera
ENSORLG00020009362	matr3l1.1	81	33.333	ENSCSAG00000013075	-	87	33.333	Chlorocebus_sabaeus
ENSORLG00020009362	matr3l1.1	81	37.162	ENSCANG00000028224	-	73	37.879	Colobus_angolensis_palliatus
ENSORLG00020009362	matr3l1.1	80	33.333	ENSCGRG00001020227	Matr3	71	37.879	Cricetulus_griseus_chok1gshd
ENSORLG00020009362	matr3l1.1	80	33.333	ENSCGRG00000011298	Matr3	71	36.364	Cricetulus_griseus_crigri
ENSORLG00020009362	matr3l1.1	99	57.360	ENSCSEG00000012682	matr3l1.1	99	57.143	Cynoglossus_semilaevis
ENSORLG00020009362	matr3l1.1	99	58.739	ENSCVAG00000005337	matr3l1.1	99	57.875	Cyprinodon_variegatus
ENSORLG00020009362	matr3l1.1	80	39.416	ENSDNOG00000037723	-	66	38.686	Dasypus_novemcinctus
ENSORLG00020009362	matr3l1.1	90	33.333	ENSEASG00005020857	-	69	37.121	Equus_asinus_asinus
ENSORLG00020009362	matr3l1.1	90	33.333	ENSECAG00000012882	MATR3	69	37.121	Equus_caballus
ENSORLG00020009362	matr3l1.1	98	49.563	ENSELUG00000021848	matr3l1.1	99	48.303	Esox_lucius
ENSORLG00020009362	matr3l1.1	80	33.333	ENSFCAG00000021911	-	70	37.879	Felis_catus
ENSORLG00020009362	matr3l1.1	79	35.036	ENSFALG00000003071	-	67	61.111	Ficedula_albicollis
ENSORLG00020009362	matr3l1.1	80	33.333	ENSFDAG00000017675	-	64	46.341	Fukomys_damarensis
ENSORLG00020009362	matr3l1.1	85	32.955	ENSGALG00000002478	MATR3	67	61.111	Gallus_gallus
ENSORLG00020009362	matr3l1.1	80	39.416	ENSGGOG00000007308	-	72	38.636	Gorilla_gorilla
ENSORLG00020009362	matr3l1.1	80	33.333	ENSHGLG00000004673	MATR3	63	46.341	Heterocephalus_glaber_female
ENSORLG00020009362	matr3l1.1	59	33.333	ENSHGLG00100006442	-	51	46.341	Heterocephalus_glaber_male
ENSORLG00020009362	matr3l1.1	88	55.543	ENSHCOG00000013223	matr3l1.1	99	51.320	Hippocampus_comes
ENSORLG00020009362	matr3l1.1	80	33.333	ENSSTOG00000014746	-	71	39.394	Ictidomys_tridecemlineatus
ENSORLG00020009362	matr3l1.1	81	33.333	ENSJJAG00000021710	-	58	57.407	Jaculus_jaculus
ENSORLG00020009362	matr3l1.1	87	34.884	ENSLACG00000006743	-	68	54.386	Latimeria_chalumnae
ENSORLG00020009362	matr3l1.1	81	37.162	ENSMFAG00000000634	-	70	37.879	Macaca_fascicularis
ENSORLG00020009362	matr3l1.1	81	37.162	ENSMMUG00000016741	MATR3	70	37.879	Macaca_mulatta
ENSORLG00020009362	matr3l1.1	66	34.444	ENSMMUG00000015963	-	91	34.444	Macaca_mulatta
ENSORLG00020009362	matr3l1.1	81	37.162	ENSMNEG00000042856	-	71	37.879	Macaca_nemestrina
ENSORLG00020009362	matr3l1.1	81	37.162	ENSMLEG00000041178	-	71	37.879	Mandrillus_leucophaeus
ENSORLG00020009362	matr3l1.1	89	67.704	ENSMAMG00000013840	matr3l1.1	99	64.701	Mastacembelus_armatus
ENSORLG00020009362	matr3l1.1	85	33.333	ENSMGAG00000001331	-	67	61.111	Meleagris_gallopavo
ENSORLG00020009362	matr3l1.1	80	33.333	ENSMAUG00000011647	Matr3	71	36.364	Mesocricetus_auratus
ENSORLG00020009362	matr3l1.1	63	33.333	ENSMICG00000012438	-	73	36.923	Microcebus_murinus
ENSORLG00020009362	matr3l1.1	81	33.333	ENSMOCG00000015711	Matr3	70	36.765	Microtus_ochrogaster
ENSORLG00020009362	matr3l1.1	80	32.188	ENSMODG00000011925	-	63	45.122	Monodelphis_domestica
ENSORLG00020009362	matr3l1.1	80	33.333	MGP_CAROLIEiJ_G0022108	Matr3	70	37.879	Mus_caroli
ENSORLG00020009362	matr3l1.1	80	33.333	ENSMUSG00000037236	Matr3	71	36.364	Mus_musculus
ENSORLG00020009362	matr3l1.1	80	33.333	MGP_PahariEiJ_G0018842	Matr3	70	37.879	Mus_pahari
ENSORLG00020009362	matr3l1.1	80	33.333	MGP_SPRETEiJ_G0023020	Matr3	70	37.879	Mus_spretus
ENSORLG00020009362	matr3l1.1	80	38.519	ENSMPUG00000009297	-	68	37.778	Mustela_putorius_furo
ENSORLG00020009362	matr3l1.1	80	31.016	ENSMLUG00000005798	-	70	35.374	Myotis_lucifugus
ENSORLG00020009362	matr3l1.1	80	33.333	ENSNGAG00000017452	Matr3	63	46.341	Nannospalax_galili
ENSORLG00020009362	matr3l1.1	81	33.333	ENSNLEG00000009093	-	72	37.879	Nomascus_leucogenys
ENSORLG00020009362	matr3l1.1	80	37.226	ENSOPRG00000016511	-	67	36.496	Ochotona_princeps
ENSORLG00020009362	matr3l1.1	80	33.333	ENSODEG00000003015	-	63	44.186	Octodon_degus
ENSORLG00020009362	matr3l1.1	80	33.333	ENSOCUG00000026311	MATR3	69	37.879	Oryctolagus_cuniculus
ENSORLG00020009362	matr3l1.1	72	98.205	ENSORLG00000025674	matr3l1.1	100	98.205	Oryzias_latipes
ENSORLG00020009362	matr3l1.1	100	98.249	ENSORLG00015018551	matr3l1.1	100	98.249	Oryzias_latipes_hsok
ENSORLG00020009362	matr3l1.1	99	90.051	ENSOMEG00000022287	matr3l1.1	99	89.052	Oryzias_melastigma
ENSORLG00020009362	matr3l1.1	81	33.333	ENSOGAG00000010607	-	71	36.364	Otolemur_garnettii
ENSORLG00020009362	matr3l1.1	80	33.333	ENSOARG00000016931	-	69	37.879	Ovis_aries
ENSORLG00020009362	matr3l1.1	63	33.333	ENSPPAG00000026720	-	51	34.444	Pan_paniscus
ENSORLG00020009362	matr3l1.1	80	38.686	ENSPPAG00000001418	-	72	37.879	Pan_paniscus
ENSORLG00020009362	matr3l1.1	80	33.333	ENSPPRG00000008004	-	70	37.879	Panthera_pardus
ENSORLG00020009362	matr3l1.1	80	33.333	ENSPTIG00000010711	-	72	37.879	Panthera_tigris_altaica
ENSORLG00020009362	matr3l1.1	80	38.686	ENSPTRG00000017294	MATR3	70	37.879	Pan_troglodytes
ENSORLG00020009362	matr3l1.1	81	37.162	ENSPANG00000012018	-	71	37.879	Papio_anubis
ENSORLG00020009362	matr3l1.1	63	33.333	ENSPANG00000032489	-	72	37.879	Papio_anubis
ENSORLG00020009362	matr3l1.1	99	47.810	ENSPKIG00000000333	matr3l1.1	99	47.192	Paramormyrops_kingsleyae
ENSORLG00020009362	matr3l1.1	80	34.395	ENSPSIG00000014598	-	76	36.620	Pelodiscus_sinensis
ENSORLG00020009362	matr3l1.1	80	33.333	ENSPEMG00000020679	Matr3	71	37.762	Peromyscus_maniculatus_bairdii
ENSORLG00020009362	matr3l1.1	81	37.162	ENSPPYG00000015835	-	67	36.486	Pongo_abelii
ENSORLG00020009362	matr3l1.1	80	33.333	ENSPCOG00000025718	-	70	37.879	Propithecus_coquereli
ENSORLG00020009362	matr3l1.1	80	37.879	ENSPVAG00000015431	-	67	37.121	Pteropus_vampyrus
ENSORLG00020009362	matr3l1.1	53	65.054	ENSPNYG00000015855	-	99	63.710	Pundamilia_nyererei
ENSORLG00020009362	matr3l1.1	80	33.333	ENSRNOG00000019875	Matr3	55	34.444	Rattus_norvegicus
ENSORLG00020009362	matr3l1.1	63	33.333	ENSRBIG00000034713	-	70	37.879	Rhinopithecus_bieti
ENSORLG00020009362	matr3l1.1	80	33.333	ENSRROG00000043949	-	73	36.364	Rhinopithecus_roxellana
ENSORLG00020009362	matr3l1.1	79	38.686	ENSRROG00000039415	-	72	36.364	Rhinopithecus_roxellana
ENSORLG00020009362	matr3l1.1	78	37.778	ENSSBOG00000030159	-	94	33.333	Saimiri_boliviensis_boliviensis
ENSORLG00020009362	matr3l1.1	80	32.188	ENSSHAG00000010331	-	63	46.341	Sarcophilus_harrisii
ENSORLG00020009362	matr3l1.1	50	46.951	ENSSFOG00015001838	-	55	55.466	Scleropages_formosus
ENSORLG00020009362	matr3l1.1	61	75.140	ENSSDUG00000015369	matr3l1.1	99	64.727	Seriola_dumerili
ENSORLG00020009362	matr3l1.1	87	34.807	ENSSPUG00000019236	-	64	39.344	Sphenodon_punctatus
ENSORLG00020009362	matr3l1.1	80	38.519	ENSSSCG00000014343	-	70	37.879	Sus_scrofa
ENSORLG00020009362	matr3l1.1	92	35.036	ENSTGUG00000014568	MATR3	76	35.036	Taeniopygia_guttata
ENSORLG00020009362	matr3l1.1	64	55.772	ENSTRUG00000001692	-	91	55.306	Takifugu_rubripes
ENSORLG00020009362	matr3l1.1	93	52.392	ENSTNIG00000003166	matr3l1.1	94	64.789	Tetraodon_nigroviridis
ENSORLG00020009362	matr3l1.1	75	33.333	ENSUAMG00000000097	-	63	34.444	Ursus_americanus
ENSORLG00020009362	matr3l1.1	80	38.519	ENSUMAG00000015808	-	69	37.879	Ursus_maritimus
ENSORLG00020009362	matr3l1.1	79	38.298	ENSVPAG00000006337	-	66	37.589	Vicugna_pacos
ENSORLG00020009362	matr3l1.1	80	33.333	ENSVVUG00000020287	-	70	37.879	Vulpes_vulpes
ENSORLG00020009362	matr3l1.1	89	61.224	ENSXETG00000003838	matr3	60	59.259	Xenopus_tropicalis
ENSORLG00020009362	matr3l1.1	65	67.130	ENSXMAG00000014107	-	89	54.353	Xiphophorus_maculatus