EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020009462 (Gene tree)
Gene ID: -
Gene Symbol: skiv2l
Alias: -
Full Name: SKI2 homolog%2C superkiller viralicidic activity 2-like
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 23387 bases
Position: chr11:3976363-3999749
Accession: ZDB-GENE-010430-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020008457	rRNA_proc-arch	PF13234.6	6.8e-30	1	1
ENSORLP00020026765	rRNA_proc-arch	PF13234.6	7.3e-30	1	1
ENSORLP00020008408	rRNA_proc-arch	PF13234.6	4.5e-24	1	1
ENSORLP00020008408	DEAD	PF00270.29	1.9e-17	1	1
ENSORLP00020008457	DEAD	PF00270.29	3.3e-17	1	1
ENSORLP00020026765	DEAD	PF00270.29	3.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020001213	-	3528	-	ENSORLP00020008408	1175 (aa)	-	-
ENSORLT00020001147	-	3812	-	ENSORLP00020008457	1199 (aa)	-	-
ENSORLT00020001063	-	7133	-	ENSORLP00020026765	1246 (aa)	-	-

Gene Model

Click here to download ENSORLG00020009462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020009462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020009462	skiv2l	81	35.649	ENSORLG00020006329	mtrex	94	34.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020009462	skiv2l	99	61.285	ENSG00000204351	SKIV2L	99	61.014	Homo_sapiens
ENSORLG00020009462	skiv2l	100	88.122	ENSAPOG00000008257	skiv2l	100	88.122	Acanthochromis_polyacanthus
ENSORLG00020009462	skiv2l	99	61.138	ENSAMEG00000002078	SKIV2L	99	61.155	Ailuropoda_melanoleuca
ENSORLG00020009462	skiv2l	99	86.386	ENSACIG00000016719	skiv2l	99	86.386	Amphilophus_citrinellus
ENSORLG00020009462	skiv2l	100	88.363	ENSAOCG00000017352	skiv2l	100	88.363	Amphiprion_ocellaris
ENSORLG00020009462	skiv2l	100	88.283	ENSAPEG00000001055	skiv2l	100	88.283	Amphiprion_percula
ENSORLG00020009462	skiv2l	100	88.363	ENSATEG00000007601	skiv2l	100	88.363	Anabas_testudineus
ENSORLG00020009462	skiv2l	97	66.397	ENSACAG00000011746	SKIV2L	99	63.388	Anolis_carolinensis
ENSORLG00020009462	skiv2l	99	61.767	ENSANAG00000037992	SKIV2L	99	61.490	Aotus_nancymaae
ENSORLG00020009462	skiv2l	100	88.363	ENSACLG00000006886	skiv2l	100	88.283	Astatotilapia_calliptera
ENSORLG00020009462	skiv2l	100	80.576	ENSAMXG00000011517	skiv2l	100	80.990	Astyanax_mexicanus
ENSORLG00020009462	skiv2l	99	61.699	ENSBTAG00000005587	SKIV2L	99	61.563	Bos_taurus
ENSORLG00020009462	skiv2l	96	40.681	WBGene00008502	skih-2	99	40.966	Caenorhabditis_elegans
ENSORLG00020009462	skiv2l	99	61.526	ENSCJAG00000002263	SKIV2L	99	61.252	Callithrix_jacchus
ENSORLG00020009462	skiv2l	99	61.285	ENSCAFG00000000679	SKIV2L	99	61.392	Canis_familiaris
ENSORLG00020009462	skiv2l	99	61.285	ENSCAFG00020000948	SKIV2L	99	61.392	Canis_lupus_dingo
ENSORLG00020009462	skiv2l	99	61.779	ENSCHIG00000012897	SKIV2L	99	61.690	Capra_hircus
ENSORLG00020009462	skiv2l	99	61.606	ENSTSYG00000012133	SKIV2L	99	61.423	Carlito_syrichta
ENSORLG00020009462	skiv2l	96	65.092	ENSCPOG00000001307	SKIV2L	99	61.973	Cavia_porcellus
ENSORLG00020009462	skiv2l	99	61.687	ENSCCAG00000026206	SKIV2L	99	61.410	Cebus_capucinus
ENSORLG00020009462	skiv2l	99	61.285	ENSCATG00000036901	SKIV2L	99	61.331	Cercocebus_atys
ENSORLG00020009462	skiv2l	99	61.779	ENSCLAG00000007678	SKIV2L	99	61.472	Chinchilla_lanigera
ENSORLG00020009462	skiv2l	99	61.760	ENSCSAG00000008988	SKIV2L	99	61.392	Chlorocebus_sabaeus
ENSORLG00020009462	skiv2l	87	62.572	ENSCPBG00000000343	SKIV2L	99	59.936	Chrysemys_picta_bellii
ENSORLG00020009462	skiv2l	93	51.330	ENSCING00000005576	-	99	50.987	Ciona_intestinalis
ENSORLG00020009462	skiv2l	99	61.446	ENSCANG00000039709	SKIV2L	100	60.763	Colobus_angolensis_palliatus
ENSORLG00020009462	skiv2l	99	61.717	ENSCGRG00001008385	Skiv2l	99	61.508	Cricetulus_griseus_chok1gshd
ENSORLG00020009462	skiv2l	99	85.072	ENSCSEG00000011326	skiv2l	99	85.072	Cynoglossus_semilaevis
ENSORLG00020009462	skiv2l	100	88.061	ENSCVAG00000003072	skiv2l	99	89.858	Cyprinodon_variegatus
ENSORLG00020009462	skiv2l	100	81.775	ENSDARG00000062206	skiv2l	100	81.775	Danio_rerio
ENSORLG00020009462	skiv2l	92	66.148	ENSDNOG00000037590	SKIV2L	93	65.949	Dasypus_novemcinctus
ENSORLG00020009462	skiv2l	91	48.525	FBgn0039117	tst	97	45.910	Drosophila_melanogaster
ENSORLG00020009462	skiv2l	72	74.684	ENSETEG00000009522	SKIV2L	69	74.684	Echinops_telfairi
ENSORLG00020009462	skiv2l	94	55.422	ENSEBUG00000013680	-	98	55.064	Eptatretus_burgeri
ENSORLG00020009462	skiv2l	93	62.489	ENSEASG00005015534	SKIV2L	100	62.872	Equus_asinus_asinus
ENSORLG00020009462	skiv2l	93	61.747	ENSECAG00000021823	SKIV2L	95	62.000	Equus_caballus
ENSORLG00020009462	skiv2l	54	74.308	ENSEEUG00000005049	SKIV2L	57	74.308	Erinaceus_europaeus
ENSORLG00020009462	skiv2l	100	83.120	ENSELUG00000000181	skiv2l	97	86.979	Esox_lucius
ENSORLG00020009462	skiv2l	99	61.526	ENSFCAG00000004519	SKIV2L	99	61.648	Felis_catus
ENSORLG00020009462	skiv2l	96	63.646	ENSFDAG00000009438	SKIV2L	99	60.253	Fukomys_damarensis
ENSORLG00020009462	skiv2l	100	88.221	ENSFHEG00000008853	skiv2l	100	88.221	Fundulus_heteroclitus
ENSORLG00020009462	skiv2l	99	80.225	ENSGMOG00000005926	skiv2l	99	80.225	Gadus_morhua
ENSORLG00020009462	skiv2l	68	74.586	ENSGALG00000035499	SKIV2L	99	56.090	Gallus_gallus
ENSORLG00020009462	skiv2l	100	88.381	ENSGAFG00000002382	skiv2l	100	88.381	Gambusia_affinis
ENSORLG00020009462	skiv2l	100	87.071	ENSGACG00000002927	skiv2l	99	87.071	Gasterosteus_aculeatus
ENSORLG00020009462	skiv2l	50	68.249	ENSGAGG00000015556	SKIV2L	76	70.466	Gopherus_agassizii
ENSORLG00020009462	skiv2l	99	61.446	ENSGGOG00000002270	SKIV2L	99	61.173	Gorilla_gorilla
ENSORLG00020009462	skiv2l	100	88.523	ENSHBUG00000000726	skiv2l	100	88.443	Haplochromis_burtoni
ENSORLG00020009462	skiv2l	96	64.851	ENSHGLG00000016596	SKIV2L	99	61.551	Heterocephalus_glaber_female
ENSORLG00020009462	skiv2l	99	60.064	ENSHGLG00100014161	SKIV2L	99	59.889	Heterocephalus_glaber_male
ENSORLG00020009462	skiv2l	98	80.456	ENSHCOG00000007191	skiv2l	100	80.456	Hippocampus_comes
ENSORLG00020009462	skiv2l	100	80.176	ENSIPUG00000016263	skiv2l	100	80.081	Ictalurus_punctatus
ENSORLG00020009462	skiv2l	97	65.191	ENSSTOG00000014596	SKIV2L	99	61.392	Ictidomys_tridecemlineatus
ENSORLG00020009462	skiv2l	53	84.328	ENSLACG00000002986	-	60	62.925	Latimeria_chalumnae
ENSORLG00020009462	skiv2l	99	61.606	ENSLAFG00000014231	SKIV2L	99	61.472	Loxodonta_africana
ENSORLG00020009462	skiv2l	99	61.446	ENSMFAG00000034235	SKIV2L	99	61.569	Macaca_fascicularis
ENSORLG00020009462	skiv2l	99	61.446	ENSMMUG00000000736	SKIV2L	99	61.410	Macaca_mulatta
ENSORLG00020009462	skiv2l	99	61.446	ENSMNEG00000044474	SKIV2L	99	61.569	Macaca_nemestrina
ENSORLG00020009462	skiv2l	99	61.285	ENSMLEG00000030512	SKIV2L	99	61.331	Mandrillus_leucophaeus
ENSORLG00020009462	skiv2l	100	87.660	ENSMAMG00000002927	skiv2l	100	87.660	Mastacembelus_armatus
ENSORLG00020009462	skiv2l	100	88.443	ENSMZEG00005026415	skiv2l	100	88.363	Maylandia_zebra
ENSORLG00020009462	skiv2l	61	69.231	ENSMGAG00000001320	SKIV2L	82	69.231	Meleagris_gallopavo
ENSORLG00020009462	skiv2l	97	64.213	ENSMAUG00000018613	Skiv2l	99	60.742	Mesocricetus_auratus
ENSORLG00020009462	skiv2l	99	61.928	ENSMICG00000046331	SKIV2L	99	61.886	Microcebus_murinus
ENSORLG00020009462	skiv2l	99	60.305	ENSMOCG00000014240	Skiv2l	99	60.190	Microtus_ochrogaster
ENSORLG00020009462	skiv2l	99	83.936	ENSMMOG00000014547	skiv2l	99	83.936	Mola_mola
ENSORLG00020009462	skiv2l	97	65.708	ENSMODG00000015052	SKIV2L	99	61.927	Monodelphis_domestica
ENSORLG00020009462	skiv2l	99	83.307	ENSMALG00000010535	skiv2l	99	83.307	Monopterus_albus
ENSORLG00020009462	skiv2l	99	62.027	MGP_CAROLIEiJ_G0021477	Skiv2l	99	61.746	Mus_caroli
ENSORLG00020009462	skiv2l	99	61.798	ENSMUSG00000040356	Skiv2l	99	61.667	Mus_musculus
ENSORLG00020009462	skiv2l	99	62.108	MGP_PahariEiJ_G0020472	Skiv2l	99	61.905	Mus_pahari
ENSORLG00020009462	skiv2l	99	61.637	MGP_SPRETEiJ_G0022382	Skiv2l	99	61.508	Mus_spretus
ENSORLG00020009462	skiv2l	99	61.446	ENSMPUG00000010567	SKIV2L	99	61.453	Mustela_putorius_furo
ENSORLG00020009462	skiv2l	99	61.396	ENSMLUG00000000628	SKIV2L	99	61.203	Myotis_lucifugus
ENSORLG00020009462	skiv2l	99	85.024	ENSNBRG00000018650	skiv2l	99	84.783	Neolamprologus_brichardi
ENSORLG00020009462	skiv2l	99	60.856	ENSNLEG00000006451	SKIV2L	100	60.623	Nomascus_leucogenys
ENSORLG00020009462	skiv2l	78	64.286	ENSMEUG00000006072	SKIV2L	78	63.717	Notamacropus_eugenii
ENSORLG00020009462	skiv2l	96	64.168	ENSOPRG00000003972	SKIV2L	99	60.757	Ochotona_princeps
ENSORLG00020009462	skiv2l	99	61.687	ENSODEG00000017516	SKIV2L	99	61.630	Octodon_degus
ENSORLG00020009462	skiv2l	100	88.684	ENSONIG00000013500	skiv2l	100	88.684	Oreochromis_niloticus
ENSORLG00020009462	skiv2l	99	61.526	ENSOCUG00000007019	SKIV2L	99	61.709	Oryctolagus_cuniculus
ENSORLG00020009462	skiv2l	100	99.679	ENSORLG00000002021	skiv2l	100	99.679	Oryzias_latipes
ENSORLG00020009462	skiv2l	100	98.796	ENSORLG00015016750	skiv2l	100	98.796	Oryzias_latipes_hsok
ENSORLG00020009462	skiv2l	100	94.226	ENSOMEG00000008531	skiv2l	100	94.226	Oryzias_melastigma
ENSORLG00020009462	skiv2l	99	61.699	ENSOGAG00000009578	SKIV2L	99	61.490	Otolemur_garnettii
ENSORLG00020009462	skiv2l	99	58.229	ENSOARG00000002411	-	99	58.269	Ovis_aries
ENSORLG00020009462	skiv2l	99	61.022	ENSPPAG00000040211	SKIV2L	100	60.870	Pan_paniscus
ENSORLG00020009462	skiv2l	99	61.687	ENSPPRG00000005017	SKIV2L	99	61.807	Panthera_pardus
ENSORLG00020009462	skiv2l	99	61.285	ENSPTIG00000021656	SKIV2L	99	61.410	Panthera_tigris_altaica
ENSORLG00020009462	skiv2l	99	61.446	ENSPTRG00000017997	SKIV2L	99	61.173	Pan_troglodytes
ENSORLG00020009462	skiv2l	99	60.432	ENSPANG00000011501	SKIV2L	100	60.601	Papio_anubis
ENSORLG00020009462	skiv2l	100	77.804	ENSPKIG00000011876	skiv2l	100	77.804	Paramormyrops_kingsleyae
ENSORLG00020009462	skiv2l	99	83.990	ENSPMGG00000019707	skiv2l	99	84.393	Periophthalmus_magnuspinnatus
ENSORLG00020009462	skiv2l	99	61.303	ENSPEMG00000019001	Skiv2l	99	61.142	Peromyscus_maniculatus_bairdii
ENSORLG00020009462	skiv2l	97	65.262	ENSPCIG00000018792	SKIV2L	99	61.563	Phascolarctos_cinereus
ENSORLG00020009462	skiv2l	100	88.061	ENSPFOG00000002424	skiv2l	100	88.061	Poecilia_formosa
ENSORLG00020009462	skiv2l	100	88.061	ENSPLAG00000018304	skiv2l	100	88.061	Poecilia_latipinna
ENSORLG00020009462	skiv2l	100	88.141	ENSPMEG00000006997	skiv2l	100	88.141	Poecilia_mexicana
ENSORLG00020009462	skiv2l	99	84.281	ENSPREG00000002277	skiv2l	98	89.117	Poecilia_reticulata
ENSORLG00020009462	skiv2l	99	61.124	ENSPPYG00000016472	SKIV2L	99	60.856	Pongo_abelii
ENSORLG00020009462	skiv2l	79	78.481	ENSPCAG00000004178	SKIV2L	75	78.481	Procavia_capensis
ENSORLG00020009462	skiv2l	99	61.687	ENSPCOG00000010308	SKIV2L	99	61.886	Propithecus_coquereli
ENSORLG00020009462	skiv2l	99	61.767	ENSPVAG00000005136	SKIV2L	99	61.490	Pteropus_vampyrus
ENSORLG00020009462	skiv2l	99	83.953	ENSPNYG00000017853	skiv2l	99	88.489	Pundamilia_nyererei
ENSORLG00020009462	skiv2l	99	82.201	ENSPNAG00000011823	skiv2l	100	81.702	Pygocentrus_nattereri
ENSORLG00020009462	skiv2l	99	62.269	ENSRNOG00000000421	Skiv2l	99	61.984	Rattus_norvegicus
ENSORLG00020009462	skiv2l	99	60.255	ENSRBIG00000035485	SKIV2L	99	60.331	Rhinopithecus_bieti
ENSORLG00020009462	skiv2l	99	61.526	ENSRROG00000036429	SKIV2L	99	61.569	Rhinopithecus_roxellana
ENSORLG00020009462	skiv2l	80	63.095	YLR398C	-	72	63.095	Saccharomyces_cerevisiae
ENSORLG00020009462	skiv2l	99	61.847	ENSSBOG00000027920	SKIV2L	99	61.569	Saimiri_boliviensis_boliviensis
ENSORLG00020009462	skiv2l	97	65.365	ENSSHAG00000008963	SKIV2L	99	60.441	Sarcophilus_harrisii
ENSORLG00020009462	skiv2l	100	80.846	ENSSFOG00015016930	skiv2l	100	80.846	Scleropages_formosus
ENSORLG00020009462	skiv2l	100	87.901	ENSSMAG00000020185	skiv2l	100	87.901	Scophthalmus_maximus
ENSORLG00020009462	skiv2l	100	88.132	ENSSDUG00000019977	skiv2l	100	88.132	Seriola_dumerili
ENSORLG00020009462	skiv2l	99	82.220	ENSSLDG00000024382	skiv2l	99	82.220	Seriola_lalandi_dorsalis
ENSORLG00020009462	skiv2l	98	64.128	ENSSPUG00000012945	SKIV2L	99	62.184	Sphenodon_punctatus
ENSORLG00020009462	skiv2l	95	88.409	ENSSPAG00000012904	skiv2l	99	88.409	Stegastes_partitus
ENSORLG00020009462	skiv2l	99	61.490	ENSSSCG00000001424	SKIV2L	100	60.992	Sus_scrofa
ENSORLG00020009462	skiv2l	73	83.957	ENSTRUG00000000966	skiv2l	100	68.972	Takifugu_rubripes
ENSORLG00020009462	skiv2l	100	83.613	ENSTNIG00000004382	skiv2l	99	83.853	Tetraodon_nigroviridis
ENSORLG00020009462	skiv2l	90	83.117	ENSTBEG00000003462	SKIV2L	94	63.067	Tupaia_belangeri
ENSORLG00020009462	skiv2l	99	57.590	ENSTTRG00000005931	SKIV2L	99	57.911	Tursiops_truncatus
ENSORLG00020009462	skiv2l	99	61.365	ENSUAMG00000024336	SKIV2L	99	61.551	Ursus_americanus
ENSORLG00020009462	skiv2l	93	62.075	ENSUMAG00000012666	SKIV2L	100	62.298	Ursus_maritimus
ENSORLG00020009462	skiv2l	99	61.205	ENSVVUG00000022807	SKIV2L	99	61.331	Vulpes_vulpes
ENSORLG00020009462	skiv2l	97	62.564	ENSXETG00000010932	skiv2l	99	58.661	Xenopus_tropicalis
ENSORLG00020009462	skiv2l	99	87.219	ENSXCOG00000019517	skiv2l	97	87.219	Xiphophorus_couchianus
ENSORLG00020009462	skiv2l	100	88.221	ENSXMAG00000014079	skiv2l	100	87.981	Xiphophorus_maculatus