EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020009554 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5180 bases
Position: chr16:30270011-30275190
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020008651	zf-C2H2	PF00096.26	7e-36	1	7
ENSORLP00020008651	zf-C2H2	PF00096.26	7e-36	2	7
ENSORLP00020008651	zf-C2H2	PF00096.26	7e-36	3	7
ENSORLP00020008651	zf-C2H2	PF00096.26	7e-36	4	7
ENSORLP00020008651	zf-C2H2	PF00096.26	7e-36	5	7
ENSORLP00020008651	zf-C2H2	PF00096.26	7e-36	6	7
ENSORLP00020008651	zf-C2H2	PF00096.26	7e-36	7	7
ENSORLP00020008645	zf-C2H2	PF00096.26	1.3e-35	1	7
ENSORLP00020008645	zf-C2H2	PF00096.26	1.3e-35	2	7
ENSORLP00020008645	zf-C2H2	PF00096.26	1.3e-35	3	7
ENSORLP00020008645	zf-C2H2	PF00096.26	1.3e-35	4	7
ENSORLP00020008645	zf-C2H2	PF00096.26	1.3e-35	5	7
ENSORLP00020008645	zf-C2H2	PF00096.26	1.3e-35	6	7
ENSORLP00020008645	zf-C2H2	PF00096.26	1.3e-35	7	7
ENSORLP00020008651	zf-met	PF12874.7	2.2e-11	1	1
ENSORLP00020008645	zf-met	PF12874.7	4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020000831	-	1020	-	ENSORLP00020008651	339 (aa)	-	-
ENSORLT00020000839	-	1077	-	ENSORLP00020008645	358 (aa)	-	-

Gene Model

Click here to download ENSORLG00020009554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020009554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020009554	-	81	38.914	ENSORLG00020008933	-	76	38.914
ENSORLG00020009554	-	79	49.153	ENSORLG00020010804	-	97	39.062
ENSORLG00020009554	-	78	38.144	ENSORLG00020018921	-	75	38.144
ENSORLG00020009554	-	89	36.126	ENSORLG00020002128	-	98	36.126
ENSORLG00020009554	-	78	43.810	ENSORLG00020018069	-	94	36.546
ENSORLG00020009554	-	92	35.965	ENSORLG00020018503	-	75	36.296
ENSORLG00020009554	-	54	40.909	ENSORLG00020011808	-	52	38.542
ENSORLG00020009554	-	82	33.984	ENSORLG00020004889	ZNF319	93	33.984
ENSORLG00020009554	-	76	44.928	ENSORLG00020007074	-	97	44.444
ENSORLG00020009554	-	81	33.962	ENSORLG00020000009	znf710b	54	33.829
ENSORLG00020009554	-	76	39.301	ENSORLG00020009089	-	54	39.301
ENSORLG00020009554	-	80	36.548	ENSORLG00020020419	-	80	36.863
ENSORLG00020009554	-	78	41.270	ENSORLG00020010647	-	79	41.270
ENSORLG00020009554	-	70	32.000	ENSORLG00020020094	-	59	31.313
ENSORLG00020009554	-	83	39.506	ENSORLG00020018051	prdm5	79	39.506
ENSORLG00020009554	-	86	35.751	ENSORLG00020010937	patz1	54	34.197
ENSORLG00020009554	-	77	35.838	ENSORLG00020003719	GFI1B	56	35.838
ENSORLG00020009554	-	83	43.860	ENSORLG00020009857	-	94	43.860
ENSORLG00020009554	-	84	42.857	ENSORLG00020007967	-	98	42.857
ENSORLG00020009554	-	80	36.747	ENSORLG00020018791	-	85	36.747
ENSORLG00020009554	-	86	35.776	ENSORLG00020007599	-	66	35.776
ENSORLG00020009554	-	95	38.596	ENSORLG00020008891	-	91	40.588
ENSORLG00020009554	-	75	46.667	ENSORLG00020010560	-	98	40.132
ENSORLG00020009554	-	78	42.268	ENSORLG00020006433	-	91	42.268
ENSORLG00020009554	-	75	40.086	ENSORLG00020008424	-	84	40.086
ENSORLG00020009554	-	73	39.098	ENSORLG00020001922	-	65	42.353
ENSORLG00020009554	-	81	38.039	ENSORLG00020000246	-	92	38.039
ENSORLG00020009554	-	76	39.827	ENSORLG00020007018	-	82	39.827
ENSORLG00020009554	-	77	44.444	ENSORLG00020010932	-	83	44.444
ENSORLG00020009554	-	75	39.908	ENSORLG00020011149	-	88	38.800
ENSORLG00020009554	-	78	41.727	ENSORLG00020021857	-	55	41.727
ENSORLG00020009554	-	76	38.554	ENSORLG00020010916	-	56	38.554
ENSORLG00020009554	-	79	36.496	ENSORLG00020012967	scrt1b	53	36.496
ENSORLG00020009554	-	87	44.330	ENSORLG00020009419	-	86	44.330
ENSORLG00020009554	-	76	37.195	ENSORLG00020006820	-	66	37.195
ENSORLG00020009554	-	76	45.238	ENSORLG00020000161	-	76	45.238
ENSORLG00020009554	-	80	37.624	ENSORLG00020005815	-	80	37.624
ENSORLG00020009554	-	78	36.538	ENSORLG00020008787	snai2	69	36.538
ENSORLG00020009554	-	76	43.103	ENSORLG00020010038	-	62	43.103
ENSORLG00020009554	-	78	44.286	ENSORLG00020017528	-	70	44.286
ENSORLG00020009554	-	75	42.424	ENSORLG00020004370	-	82	42.424
ENSORLG00020009554	-	76	39.416	ENSORLG00020002817	GFI1	54	39.416
ENSORLG00020009554	-	75	37.021	ENSORLG00020010020	-	68	37.021
ENSORLG00020009554	-	85	36.054	ENSORLG00020018685	znf319b	87	36.054
ENSORLG00020009554	-	79	40.404	ENSORLG00020004353	-	90	40.404
ENSORLG00020009554	-	80	45.238	ENSORLG00020010636	-	82	45.238
ENSORLG00020009554	-	75	42.446	ENSORLG00020016666	-	62	42.446
ENSORLG00020009554	-	75	36.364	ENSORLG00020008484	-	88	36.364
ENSORLG00020009554	-	76	40.625	ENSORLG00020015703	-	51	40.625
ENSORLG00020009554	-	82	35.821	ENSORLG00020007790	zbtb48	62	35.821
ENSORLG00020009554	-	83	40.116	ENSORLG00020009943	-	99	38.991
ENSORLG00020009554	-	81	38.919	ENSORLG00020016037	-	94	40.719
ENSORLG00020009554	-	77	39.823	ENSORLG00020011234	-	75	39.823
ENSORLG00020009554	-	78	39.918	ENSORLG00020017514	-	73	39.918
ENSORLG00020009554	-	75	38.462	ENSORLG00020021196	-	50	41.615
ENSORLG00020009554	-	76	45.763	ENSORLG00020004162	znf341	51	45.763
ENSORLG00020009554	-	75	44.915	ENSORLG00020010250	-	87	44.915
ENSORLG00020009554	-	76	38.496	ENSORLG00020000481	-	81	37.551
ENSORLG00020009554	-	82	34.343	ENSORLG00020014595	PRDM15	52	34.343
ENSORLG00020009554	-	90	30.769	ENSORLG00020017076	si:ch211-216l23.1	93	30.769
ENSORLG00020009554	-	79	42.029	ENSORLG00020009965	-	71	40.491
ENSORLG00020009554	-	81	42.268	ENSORLG00020008346	-	98	37.838
ENSORLG00020009554	-	81	42.935	ENSORLG00020009139	-	97	41.146
ENSORLG00020009554	-	76	38.589	ENSORLG00020001707	-	95	36.735
ENSORLG00020009554	-	81	39.241	ENSORLG00020010285	znf646	74	40.260
ENSORLG00020009554	-	81	38.686	ENSORLG00020008744	-	67	36.517
ENSORLG00020009554	-	88	36.897	ENSORLG00020017164	-	99	37.109
ENSORLG00020009554	-	78	41.781	ENSORLG00020016754	-	89	38.860
ENSORLG00020009554	-	76	40.506	ENSORLG00020018495	-	64	40.506
ENSORLG00020009554	-	75	33.333	ENSORLG00020001758	-	56	33.333
ENSORLG00020009554	-	80	45.614	ENSORLG00020009180	-	90	45.614
ENSORLG00020009554	-	86	40.909	ENSORLG00020010950	-	97	42.727
ENSORLG00020009554	-	88	36.015	ENSORLG00020017483	-	90	38.971
ENSORLG00020009554	-	88	39.726	ENSORLG00020006144	-	79	37.008
ENSORLG00020009554	-	83	46.429	ENSORLG00020009184	-	81	46.429
ENSORLG00020009554	-	79	37.931	ENSORLG00020008018	-	75	37.931
ENSORLG00020009554	-	88	39.759	ENSORLG00020010171	-	99	38.542
ENSORLG00020009554	-	82	43.939	ENSORLG00020010953	-	78	43.939
ENSORLG00020009554	-	81	39.109	ENSORLG00020005132	-	74	39.109
ENSORLG00020009554	-	94	40.000	ENSORLG00020001912	znf236	72	40.000
ENSORLG00020009554	-	74	39.316	ENSORLG00020019341	-	60	57.576
ENSORLG00020009554	-	78	39.831	ENSORLG00020017850	-	88	38.129
ENSORLG00020009554	-	79	44.099	ENSORLG00020000219	-	73	40.541
ENSORLG00020009554	-	81	40.278	ENSORLG00020011075	-	79	40.278
ENSORLG00020009554	-	80	38.272	ENSORLG00020000264	-	52	38.272
ENSORLG00020009554	-	77	39.796	ENSORLG00020006148	-	56	39.796
ENSORLG00020009554	-	77	44.000	ENSORLG00020001791	-	58	44.000
ENSORLG00020009554	-	88	38.983	ENSORLG00020010880	-	82	41.546

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020009554	-	77	40.909	ENSAPOG00000021496	-	52	30.038	Acanthochromis_polyacanthus
ENSORLG00020009554	-	83	38.021	ENSACIG00000016133	-	65	38.021	Amphilophus_citrinellus
ENSORLG00020009554	-	77	31.203	ENSAPEG00000010478	-	50	31.203	Amphiprion_percula
ENSORLG00020009554	-	75	41.081	ENSAPEG00000011635	-	60	41.081	Amphiprion_percula
ENSORLG00020009554	-	76	34.356	ENSATEG00000024551	-	67	34.356	Anabas_testudineus
ENSORLG00020009554	-	75	43.571	ENSATEG00000011202	-	66	43.571	Anabas_testudineus
ENSORLG00020009554	-	75	42.162	ENSATEG00000011235	-	56	42.162	Anabas_testudineus
ENSORLG00020009554	-	81	37.903	ENSATEG00000022022	-	92	37.903	Anabas_testudineus
ENSORLG00020009554	-	78	38.788	ENSATEG00000015828	-	71	38.788	Anabas_testudineus
ENSORLG00020009554	-	78	30.120	ENSAMXG00000035090	-	56	30.120	Astyanax_mexicanus
ENSORLG00020009554	-	77	37.500	ENSCVAG00000004508	-	57	37.500	Cyprinodon_variegatus
ENSORLG00020009554	-	80	34.597	ENSCVAG00000018494	-	50	34.597	Cyprinodon_variegatus
ENSORLG00020009554	-	75	39.894	ENSCVAG00000003630	-	56	39.894	Cyprinodon_variegatus
ENSORLG00020009554	-	77	35.500	ENSHBUG00000002878	-	60	35.500	Haplochromis_burtoni
ENSORLG00020009554	-	77	35.683	ENSHBUG00000000731	-	62	35.683	Haplochromis_burtoni
ENSORLG00020009554	-	74	53.704	ENSHCOG00000008205	-	68	53.704	Hippocampus_comes
ENSORLG00020009554	-	82	31.548	ENSKMAG00000019912	-	62	31.548	Kryptolebias_marmoratus
ENSORLG00020009554	-	76	47.059	ENSKMAG00000000520	-	53	47.059	Kryptolebias_marmoratus
ENSORLG00020009554	-	81	37.500	ENSLBEG00000014676	-	62	37.500	Labrus_bergylta
ENSORLG00020009554	-	75	44.578	ENSLBEG00000011006	-	50	44.048	Labrus_bergylta
ENSORLG00020009554	-	75	43.784	ENSMAMG00000022152	-	52	43.784	Mastacembelus_armatus
ENSORLG00020009554	-	81	30.822	ENSMZEG00005004047	-	64	32.948	Maylandia_zebra
ENSORLG00020009554	-	76	38.686	ENSMALG00000014761	-	69	38.509	Monopterus_albus
ENSORLG00020009554	-	78	40.984	ENSNBRG00000004381	-	77	40.984	Neolamprologus_brichardi
ENSORLG00020009554	-	80	42.424	ENSNBRG00000024051	-	57	42.424	Neolamprologus_brichardi
ENSORLG00020009554	-	81	37.356	ENSORLG00000025719	-	59	37.356	Oryzias_latipes
ENSORLG00020009554	-	81	37.356	ENSORLG00015012599	-	60	37.356	Oryzias_latipes_hsok
ENSORLG00020009554	-	76	38.272	ENSOMEG00000015640	-	69	42.308	Oryzias_melastigma
ENSORLG00020009554	-	78	40.559	ENSOMEG00000010906	-	54	40.559	Oryzias_melastigma
ENSORLG00020009554	-	79	43.119	ENSPFOG00000012948	-	55	43.119	Poecilia_formosa
ENSORLG00020009554	-	78	41.270	ENSPLAG00000009651	-	67	41.270	Poecilia_latipinna
ENSORLG00020009554	-	75	36.564	ENSPMEG00000023113	-	68	36.564	Poecilia_mexicana
ENSORLG00020009554	-	81	36.667	ENSPREG00000016270	-	74	39.301	Poecilia_reticulata
ENSORLG00020009554	-	78	40.741	ENSPREG00000000853	-	54	40.741	Poecilia_reticulata
ENSORLG00020009554	-	80	43.571	ENSPREG00000004006	-	69	43.571	Poecilia_reticulata
ENSORLG00020009554	-	77	35.500	ENSPNYG00000023882	-	65	35.500	Pundamilia_nyererei
ENSORLG00020009554	-	79	41.818	ENSPNYG00000019187	-	87	40.426	Pundamilia_nyererei
ENSORLG00020009554	-	77	42.778	ENSPNAG00000010317	-	82	42.308	Pygocentrus_nattereri
ENSORLG00020009554	-	73	43.243	ENSSLDG00000007568	-	74	43.243	Seriola_lalandi_dorsalis
ENSORLG00020009554	-	83	33.117	ENSSPAG00000017093	-	54	31.844	Stegastes_partitus
ENSORLG00020009554	-	78	43.316	ENSSPAG00000021950	-	52	43.316	Stegastes_partitus
ENSORLG00020009554	-	79	32.967	ENSSPAG00000010524	-	52	32.967	Stegastes_partitus
ENSORLG00020009554	-	86	39.015	ENSXETG00000002690	-	58	38.519	Xenopus_tropicalis
ENSORLG00020009554	-	75	33.750	ENSXCOG00000018315	-	92	33.750	Xiphophorus_couchianus