EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020009879 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 60578 bases
Position: chr21:10449682-10510259
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020027077	TUDOR	PF00567.24	6.5e-84	1	4
ENSORLP00020027077	TUDOR	PF00567.24	6.5e-84	2	4
ENSORLP00020027077	TUDOR	PF00567.24	6.5e-84	3	4
ENSORLP00020027077	TUDOR	PF00567.24	6.5e-84	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020000282	-	5469	-	ENSORLP00020027077	1552 (aa)	-	-

Gene Model

Click here to download ENSORLG00020009879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020009879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020009879	-	73	35.115	ENSORLG00020005897	amh	56	34.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020009879	-	98	31.649	ENSG00000132972	RNF17	98	36.722	Homo_sapiens
ENSORLG00020009879	-	90	56.185	ENSAPOG00000017034	rnf17	97	55.909	Acanthochromis_polyacanthus
ENSORLG00020009879	-	98	31.464	ENSAMEG00000017340	RNF17	97	31.441	Ailuropoda_melanoleuca
ENSORLG00020009879	-	99	57.928	ENSAOCG00000018283	rnf17	99	58.018	Amphiprion_ocellaris
ENSORLG00020009879	-	89	52.333	ENSAPEG00000022338	rnf17	96	52.074	Amphiprion_percula
ENSORLG00020009879	-	90	55.711	ENSATEG00000002067	rnf17	99	55.781	Anabas_testudineus
ENSORLG00020009879	-	87	31.411	ENSAPLG00000003969	RNF17	83	33.225	Anas_platyrhynchos
ENSORLG00020009879	-	76	34.687	ENSACAG00000001418	RNF17	75	34.547	Anolis_carolinensis
ENSORLG00020009879	-	100	55.978	ENSACLG00000018279	rnf17	100	56.020	Astatotilapia_calliptera
ENSORLG00020009879	-	92	44.898	ENSAMXG00000011002	rnf17	99	44.813	Astyanax_mexicanus
ENSORLG00020009879	-	59	35.812	ENSBTAG00000000278	RNF17	98	35.812	Bos_taurus
ENSORLG00020009879	-	75	35.662	ENSCJAG00000018937	RNF17	98	37.519	Callithrix_jacchus
ENSORLG00020009879	-	95	31.070	ENSCAFG00000007418	RNF17	96	30.570	Canis_familiaris
ENSORLG00020009879	-	56	40.000	ENSCAFG00020002919	-	98	35.053	Canis_lupus_dingo
ENSORLG00020009879	-	98	31.132	ENSCHIG00000026716	RNF17	98	35.812	Capra_hircus
ENSORLG00020009879	-	98	31.174	ENSTSYG00000000365	RNF17	97	35.575	Carlito_syrichta
ENSORLG00020009879	-	65	31.256	ENSCAPG00000012908	RNF17	75	31.256	Cavia_aperea
ENSORLG00020009879	-	75	34.401	ENSCCAG00000026725	RNF17	97	36.115	Cebus_capucinus
ENSORLG00020009879	-	98	31.614	ENSCATG00000040352	RNF17	98	36.571	Cercocebus_atys
ENSORLG00020009879	-	98	32.477	ENSCLAG00000004127	RNF17	97	32.270	Chinchilla_lanigera
ENSORLG00020009879	-	98	31.796	ENSCSAG00000018019	RNF17	97	31.472	Chlorocebus_sabaeus
ENSORLG00020009879	-	92	31.866	ENSCPBG00000020920	RNF17	97	31.548	Chrysemys_picta_bellii
ENSORLG00020009879	-	98	31.102	ENSCANG00000032927	RNF17	98	37.026	Colobus_angolensis_palliatus
ENSORLG00020009879	-	98	33.333	ENSCGRG00001022658	Rnf17	97	32.824	Cricetulus_griseus_chok1gshd
ENSORLG00020009879	-	98	33.333	ENSCGRG00000009924	Rnf17	97	32.824	Cricetulus_griseus_crigri
ENSORLG00020009879	-	99	46.062	ENSCSEG00000008626	rnf17	97	48.868	Cynoglossus_semilaevis
ENSORLG00020009879	-	85	49.136	ENSCVAG00000017008	rnf17	96	59.302	Cyprinodon_variegatus
ENSORLG00020009879	-	99	41.725	ENSDARG00000056387	rnf17	99	41.539	Danio_rerio
ENSORLG00020009879	-	89	34.126	ENSDNOG00000006115	RNF17	86	34.046	Dasypus_novemcinctus
ENSORLG00020009879	-	59	40.179	ENSEASG00005001421	-	98	40.179	Equus_asinus_asinus
ENSORLG00020009879	-	98	31.589	ENSECAG00000017152	RNF17	96	31.566	Equus_caballus
ENSORLG00020009879	-	60	31.169	ENSEEUG00000000332	RNF17	65	31.169	Erinaceus_europaeus
ENSORLG00020009879	-	99	45.629	ENSELUG00000005626	rnf17	99	45.466	Esox_lucius
ENSORLG00020009879	-	98	31.736	ENSFCAG00000004914	RNF17	99	35.586	Felis_catus
ENSORLG00020009879	-	92	31.511	ENSFALG00000008766	RNF17	79	33.634	Ficedula_albicollis
ENSORLG00020009879	-	98	30.971	ENSFDAG00000017857	RNF17	97	30.887	Fukomys_damarensis
ENSORLG00020009879	-	100	52.949	ENSFHEG00000014822	rnf17	99	52.717	Fundulus_heteroclitus
ENSORLG00020009879	-	79	69.492	ENSGAFG00000004463	rnf17	94	69.492	Gambusia_affinis
ENSORLG00020009879	-	52	55.385	ENSGACG00000001340	-	100	55.385	Gasterosteus_aculeatus
ENSORLG00020009879	-	90	30.913	ENSGAGG00000016999	RNF17	70	33.950	Gopherus_agassizii
ENSORLG00020009879	-	98	31.669	ENSGGOG00000014491	RNF17	98	36.722	Gorilla_gorilla
ENSORLG00020009879	-	100	56.164	ENSHBUG00000003554	rnf17	100	56.145	Haplochromis_burtoni
ENSORLG00020009879	-	98	31.660	ENSHGLG00000007270	RNF17	97	31.074	Heterocephalus_glaber_female
ENSORLG00020009879	-	98	32.007	ENSHGLG00100017393	RNF17	97	31.351	Heterocephalus_glaber_male
ENSORLG00020009879	-	81	45.013	ENSHCOG00000017676	rnf17	94	44.416	Hippocampus_comes
ENSORLG00020009879	-	89	46.337	ENSIPUG00000001087	rnf17	93	46.337	Ictalurus_punctatus
ENSORLG00020009879	-	64	33.835	ENSSTOG00000011255	-	99	34.135	Ictidomys_tridecemlineatus
ENSORLG00020009879	-	98	31.639	ENSJJAG00000016584	Rnf17	97	31.442	Jaculus_jaculus
ENSORLG00020009879	-	100	57.027	ENSKMAG00000013403	rnf17	99	56.965	Kryptolebias_marmoratus
ENSORLG00020009879	-	90	52.851	ENSLBEG00000014910	rnf17	96	52.364	Labrus_bergylta
ENSORLG00020009879	-	78	35.116	ENSLACG00000000323	RNF17	99	32.586	Latimeria_chalumnae
ENSORLG00020009879	-	100	35.169	ENSLOCG00000010768	rnf17	99	34.750	Lepisosteus_oculatus
ENSORLG00020009879	-	98	31.633	ENSMFAG00000032388	RNF17	98	36.571	Macaca_fascicularis
ENSORLG00020009879	-	98	31.920	ENSMMUG00000014610	RNF17	98	36.571	Macaca_mulatta
ENSORLG00020009879	-	98	31.633	ENSMNEG00000011234	RNF17	98	36.571	Macaca_nemestrina
ENSORLG00020009879	-	98	31.550	ENSMLEG00000030227	RNF17	97	31.296	Mandrillus_leucophaeus
ENSORLG00020009879	-	80	56.790	ENSMAMG00000020403	rnf17	93	56.790	Mastacembelus_armatus
ENSORLG00020009879	-	100	56.164	ENSMZEG00005019166	rnf17	100	56.207	Maylandia_zebra
ENSORLG00020009879	-	78	31.440	ENSMGAG00000015138	RNF17	96	31.643	Meleagris_gallopavo
ENSORLG00020009879	-	98	32.171	ENSMAUG00000004788	Rnf17	97	31.502	Mesocricetus_auratus
ENSORLG00020009879	-	98	31.437	ENSMICG00000010364	RNF17	98	35.660	Microcebus_murinus
ENSORLG00020009879	-	60	36.395	ENSMOCG00000011818	-	99	35.400	Microtus_ochrogaster
ENSORLG00020009879	-	81	52.941	ENSMMOG00000019514	rnf17	93	52.941	Mola_mola
ENSORLG00020009879	-	98	31.985	ENSMODG00000007827	RNF17	96	31.380	Monodelphis_domestica
ENSORLG00020009879	-	89	52.125	ENSMALG00000016943	rnf17	99	50.883	Monopterus_albus
ENSORLG00020009879	-	89	35.826	MGP_CAROLIEiJ_G0019337	Rnf17	87	35.720	Mus_caroli
ENSORLG00020009879	-	89	35.826	ENSMUSG00000000365	Rnf17	87	35.720	Mus_musculus
ENSORLG00020009879	-	89	36.043	MGP_PahariEiJ_G0030355	Rnf17	87	35.802	Mus_pahari
ENSORLG00020009879	-	89	36.072	MGP_SPRETEiJ_G0020228	Rnf17	87	35.967	Mus_spretus
ENSORLG00020009879	-	90	34.619	ENSMPUG00000013305	RNF17	89	34.593	Mustela_putorius_furo
ENSORLG00020009879	-	75	35.053	ENSMLUG00000003903	RNF17	97	30.788	Myotis_lucifugus
ENSORLG00020009879	-	98	32.182	ENSNGAG00000013553	Rnf17	97	31.995	Nannospalax_galili
ENSORLG00020009879	-	80	58.939	ENSNBRG00000012006	rnf17	91	58.939	Neolamprologus_brichardi
ENSORLG00020009879	-	98	31.460	ENSNLEG00000013780	RNF17	98	36.433	Nomascus_leucogenys
ENSORLG00020009879	-	81	43.939	ENSOPRG00000016743	-	51	43.939	Ochotona_princeps
ENSORLG00020009879	-	50	32.829	ENSODEG00000005443	-	97	32.308	Octodon_degus
ENSORLG00020009879	-	100	55.493	ENSONIG00000015746	rnf17	100	57.634	Oreochromis_niloticus
ENSORLG00020009879	-	98	31.517	ENSOCUG00000007384	RNF17	97	31.141	Oryctolagus_cuniculus
ENSORLG00020009879	-	89	98.763	ENSORLG00000012818	rnf17	99	98.763	Oryzias_latipes
ENSORLG00020009879	-	100	98.325	ENSORLG00015013027	-	100	98.325	Oryzias_latipes_hsok
ENSORLG00020009879	-	85	81.197	ENSOMEG00000009891	rnf17	97	80.165	Oryzias_melastigma
ENSORLG00020009879	-	98	30.598	ENSOGAG00000014803	RNF17	97	30.698	Otolemur_garnettii
ENSORLG00020009879	-	98	32.120	ENSPPAG00000028779	RNF17	98	36.890	Pan_paniscus
ENSORLG00020009879	-	98	31.953	ENSPPRG00000009230	RNF17	99	35.736	Panthera_pardus
ENSORLG00020009879	-	98	32.077	ENSPTIG00000001738	RNF17	99	35.736	Panthera_tigris_altaica
ENSORLG00020009879	-	98	32.100	ENSPTRG00000005713	RNF17	98	36.890	Pan_troglodytes
ENSORLG00020009879	-	98	31.579	ENSPANG00000007640	RNF17	98	36.571	Papio_anubis
ENSORLG00020009879	-	81	42.184	ENSPKIG00000001648	rnf17	96	42.105	Paramormyrops_kingsleyae
ENSORLG00020009879	-	75	35.265	ENSPSIG00000011245	RNF17	99	35.780	Pelodiscus_sinensis
ENSORLG00020009879	-	98	33.415	ENSPEMG00000008693	Rnf17	97	33.088	Peromyscus_maniculatus_bairdii
ENSORLG00020009879	-	70	34.468	ENSPCIG00000009190	-	92	34.216	Phascolarctos_cinereus
ENSORLG00020009879	-	100	54.863	ENSPFOG00000007124	rnf17	100	54.795	Poecilia_formosa
ENSORLG00020009879	-	100	55.910	ENSPLAG00000006198	rnf17	99	55.840	Poecilia_latipinna
ENSORLG00020009879	-	100	55.910	ENSPMEG00000022432	rnf17	99	55.903	Poecilia_mexicana
ENSORLG00020009879	-	82	63.158	ENSPREG00000001414	rnf17	91	63.158	Poecilia_reticulata
ENSORLG00020009879	-	98	31.406	ENSPPYG00000005215	RNF17	97	31.162	Pongo_abelii
ENSORLG00020009879	-	72	44.853	ENSPVAG00000013021	RNF17	72	44.853	Pteropus_vampyrus
ENSORLG00020009879	-	93	45.493	ENSPNAG00000027505	rnf17	99	48.214	Pygocentrus_nattereri
ENSORLG00020009879	-	89	36.289	ENSRNOG00000008059	Rnf17	87	36.049	Rattus_norvegicus
ENSORLG00020009879	-	98	31.435	ENSRBIG00000027010	RNF17	97	31.012	Rhinopithecus_bieti
ENSORLG00020009879	-	98	31.397	ENSRROG00000022801	RNF17	98	36.874	Rhinopithecus_roxellana
ENSORLG00020009879	-	98	31.231	ENSSBOG00000021661	RNF17	99	36.637	Saimiri_boliviensis_boliviensis
ENSORLG00020009879	-	98	31.437	ENSSHAG00000005609	RNF17	97	30.774	Sarcophilus_harrisii
ENSORLG00020009879	-	75	40.763	ENSSFOG00015023037	rnf17	89	40.847	Scleropages_formosus
ENSORLG00020009879	-	90	52.371	ENSSMAG00000007429	rnf17	98	51.959	Scophthalmus_maximus
ENSORLG00020009879	-	90	55.835	ENSSDUG00000013530	rnf17	100	55.695	Seriola_dumerili
ENSORLG00020009879	-	90	55.525	ENSSLDG00000019577	rnf17	99	56.017	Seriola_lalandi_dorsalis
ENSORLG00020009879	-	68	33.735	ENSSARG00000003016	RNF17	62	33.333	Sorex_araneus
ENSORLG00020009879	-	88	33.041	ENSSPUG00000008917	RNF17	92	32.653	Sphenodon_punctatus
ENSORLG00020009879	-	88	55.413	ENSSPAG00000001925	rnf17	99	55.342	Stegastes_partitus
ENSORLG00020009879	-	98	31.689	ENSSSCG00000009572	RNF17	97	31.673	Sus_scrofa
ENSORLG00020009879	-	60	32.956	ENSTGUG00000011267	-	99	32.865	Taeniopygia_guttata
ENSORLG00020009879	-	99	46.115	ENSTRUG00000015498	rnf17	99	46.115	Takifugu_rubripes
ENSORLG00020009879	-	75	50.716	ENSTNIG00000015681	rnf17	99	50.463	Tetraodon_nigroviridis
ENSORLG00020009879	-	76	41.423	ENSTBEG00000000282	RNF17	56	41.423	Tupaia_belangeri
ENSORLG00020009879	-	99	33.970	ENSTTRG00000012698	RNF17	95	33.970	Tursiops_truncatus
ENSORLG00020009879	-	56	39.565	ENSUMAG00000013953	-	98	34.737	Ursus_maritimus
ENSORLG00020009879	-	73	40.845	ENSVPAG00000011388	RNF17	57	40.845	Vicugna_pacos
ENSORLG00020009879	-	98	30.755	ENSVVUG00000006226	RNF17	97	30.927	Vulpes_vulpes
ENSORLG00020009879	-	72	30.546	ENSXETG00000034020	RNF17	99	36.715	Xenopus_tropicalis
ENSORLG00020009879	-	90	53.101	ENSXCOG00000018295	rnf17	99	53.310	Xiphophorus_couchianus
ENSORLG00020009879	-	90	54.705	ENSXMAG00000014747	rnf17	99	54.565	Xiphophorus_maculatus