EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020009935 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 10668 bases
Position: chr1:9397643-9408310
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020027120	MMR_HSR1	PF01926.23	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020000175	-	1452	-	ENSORLP00020027123	483 (aa)	-	-
ENSORLT00020000185	-	3900	-	ENSORLP00020027120	954 (aa)	-	-

Gene Model

Click here to download ENSORLG00020009935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020009935's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020009935	-	51	34.043	ENSORLG00020008286	-	92	34.043
ENSORLG00020009935	-	54	36.842	ENSORLG00020016100	-	60	37.008
ENSORLG00020009935	-	58	31.008	ENSORLG00020008404	-	84	32.979

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020009935	-	70	37.120	ENSAMXG00000040688	-	83	49.505	Astyanax_mexicanus
ENSORLG00020009935	-	54	35.475	ENSIPUG00000004642	si:dkeyp-69e1.8	90	35.227	Ictalurus_punctatus
ENSORLG00020009935	-	100	94.583	ENSORLG00000003769	-	100	94.792	Oryzias_latipes
ENSORLG00020009935	-	99	70.558	ENSOMEG00000016899	-	100	71.675	Oryzias_melastigma
ENSORLG00020009935	-	53	65.314	ENSPFOG00000013403	-	82	65.414	Poecilia_formosa
ENSORLG00020009935	-	99	48.853	ENSPMEG00000008621	-	71	50.143	Poecilia_mexicana
ENSORLG00020009935	-	99	49.114	ENSPREG00000013750	-	99	48.086	Poecilia_reticulata
ENSORLG00020009935	-	70	37.594	ENSPNAG00000000165	-	85	48.544	Pygocentrus_nattereri