EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020010012 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: -
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 23715 bases
Position: chr18:13081479-13105193
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	1	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	2	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	3	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	4	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	5	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	6	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	7	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	8	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	9	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	10	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	11	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	12	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	13	14
ENSORLP00020009052	KH_1	PF00013.29	1.3e-185	14	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	1	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	2	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	3	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	4	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	5	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	6	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	7	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	8	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	9	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	10	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	11	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	12	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	13	14
ENSORLP00020027122	KH_1	PF00013.29	5.6e-176	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020000128	-	4027	-	ENSORLP00020009052	1267 (aa)	-	-
ENSORLT00020000176	-	3750	-	ENSORLP00020027122	1249 (aa)	-	-

Gene Model

Click here to download ENSORLG00020010012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020010012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020010012	hdlbpb	100	71.061	ENSORLG00020007905	hdlbpa	100	70.827

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020010012	hdlbpb	100	95.505	ENSAPOG00000006904	hdlbpb	100	95.505	Acanthochromis_polyacanthus
ENSORLG00020010012	hdlbpb	100	90.259	ENSACIG00000016154	hdlbpb	100	90.259	Amphilophus_citrinellus
ENSORLG00020010012	hdlbpb	100	95.899	ENSAOCG00000004083	hdlbpb	100	95.899	Amphiprion_ocellaris
ENSORLG00020010012	hdlbpb	100	95.820	ENSAPEG00000012270	hdlbpb	100	95.820	Amphiprion_percula
ENSORLG00020010012	hdlbpb	100	94.637	ENSATEG00000019877	hdlbpb	100	94.637	Anabas_testudineus
ENSORLG00020010012	hdlbpb	100	82.005	ENSACAG00000003606	-	100	82.005	Anolis_carolinensis
ENSORLG00020010012	hdlbpb	100	95.268	ENSACLG00000006618	hdlbpb	100	95.268	Astatotilapia_calliptera
ENSORLG00020010012	hdlbpb	100	76.929	ENSAMXG00000019946	hdlbpb	100	77.008	Astyanax_mexicanus
ENSORLG00020010012	hdlbpb	100	94.396	ENSCSEG00000000955	hdlbpb	100	94.492	Cynoglossus_semilaevis
ENSORLG00020010012	hdlbpb	100	94.874	ENSCVAG00000005345	hdlbpb	100	94.874	Cyprinodon_variegatus
ENSORLG00020010012	hdlbpb	99	85.229	ENSDARG00000061864	hdlbpb	99	85.229	Danio_rerio
ENSORLG00020010012	hdlbpb	92	69.744	ENSEBUG00000005304	hdlbpb	96	69.573	Eptatretus_burgeri
ENSORLG00020010012	hdlbpb	100	68.170	ENSELUG00000019925	hdlbpb	100	77.533	Esox_lucius
ENSORLG00020010012	hdlbpb	87	33.726	ENSFHEG00000001701	hdlbpb	100	89.905	Fundulus_heteroclitus
ENSORLG00020010012	hdlbpb	95	87.322	ENSGMOG00000004522	hdlbpb	78	87.322	Gadus_morhua
ENSORLG00020010012	hdlbpb	100	95.189	ENSGAFG00000005278	hdlbpb	100	95.189	Gambusia_affinis
ENSORLG00020010012	hdlbpb	99	91.390	ENSGACG00000019361	hdlbpb	100	91.390	Gasterosteus_aculeatus
ENSORLG00020010012	hdlbpb	100	95.110	ENSHBUG00000018434	hdlbpb	100	95.110	Haplochromis_burtoni
ENSORLG00020010012	hdlbpb	100	84.464	ENSIPUG00000003291	HDLBP	100	84.729	Ictalurus_punctatus
ENSORLG00020010012	hdlbpb	100	95.741	ENSKMAG00000016562	hdlbpb	100	95.741	Kryptolebias_marmoratus
ENSORLG00020010012	hdlbpb	100	94.479	ENSLBEG00000027855	hdlbpb	100	94.479	Labrus_bergylta
ENSORLG00020010012	hdlbpb	100	85.534	ENSLACG00000007661	hdlbpb	90	85.534	Latimeria_chalumnae
ENSORLG00020010012	hdlbpb	100	82.803	ENSLOCG00000013909	hdlbpb	100	82.803	Lepisosteus_oculatus
ENSORLG00020010012	hdlbpb	100	95.268	ENSMAMG00000003035	hdlbpb	100	95.268	Mastacembelus_armatus
ENSORLG00020010012	hdlbpb	100	95.268	ENSMZEG00005021465	hdlbpb	100	95.268	Maylandia_zebra
ENSORLG00020010012	hdlbpb	100	93.370	ENSMMOG00000012525	hdlbpb	100	93.370	Mola_mola
ENSORLG00020010012	hdlbpb	100	93.612	ENSMALG00000008938	hdlbpb	100	93.612	Monopterus_albus
ENSORLG00020010012	hdlbpb	100	95.189	ENSNBRG00000002236	hdlbpb	100	95.189	Neolamprologus_brichardi
ENSORLG00020010012	hdlbpb	100	94.874	ENSONIG00000009211	hdlbpb	100	95.032	Oreochromis_niloticus
ENSORLG00020010012	hdlbpb	100	99.369	ENSORLG00000006581	hdlbpb	100	99.369	Oryzias_latipes
ENSORLG00020010012	hdlbpb	100	99.605	ENSORLG00015006863	hdlbpb	100	99.605	Oryzias_latipes_hsok
ENSORLG00020010012	hdlbpb	100	97.632	ENSOMEG00000011131	hdlbpb	100	97.632	Oryzias_melastigma
ENSORLG00020010012	hdlbpb	100	87.293	ENSPKIG00000005966	hdlbpb	100	87.451	Paramormyrops_kingsleyae
ENSORLG00020010012	hdlbpb	86	93.056	ENSPMGG00000019853	hdlbpb	99	93.056	Periophthalmus_magnuspinnatus
ENSORLG00020010012	hdlbpb	94	75.000	ENSPMAG00000002131	hdlbpb	100	75.000	Petromyzon_marinus
ENSORLG00020010012	hdlbpb	92	63.787	ENSPMAG00000000249	-	99	63.666	Petromyzon_marinus
ENSORLG00020010012	hdlbpb	100	94.228	ENSPFOG00000008755	hdlbpb	100	94.228	Poecilia_formosa
ENSORLG00020010012	hdlbpb	100	95.110	ENSPLAG00000007055	hdlbpb	100	95.110	Poecilia_latipinna
ENSORLG00020010012	hdlbpb	100	95.032	ENSPMEG00000001952	hdlbpb	100	95.032	Poecilia_mexicana
ENSORLG00020010012	hdlbpb	100	94.953	ENSPREG00000012848	hdlbpb	100	94.953	Poecilia_reticulata
ENSORLG00020010012	hdlbpb	100	95.032	ENSPNYG00000022467	hdlbpb	100	95.032	Pundamilia_nyererei
ENSORLG00020010012	hdlbpb	100	86.582	ENSPNAG00000011104	hdlbpb	100	86.582	Pygocentrus_nattereri
ENSORLG00020010012	hdlbpb	100	87.135	ENSSFOG00015023199	hdlbpb	100	87.056	Scleropages_formosus
ENSORLG00020010012	hdlbpb	100	94.716	ENSSMAG00000008790	hdlbpb	100	94.716	Scophthalmus_maximus
ENSORLG00020010012	hdlbpb	100	95.505	ENSSDUG00000020694	hdlbpb	100	95.505	Seriola_dumerili
ENSORLG00020010012	hdlbpb	100	95.189	ENSSLDG00000020807	hdlbpb	100	95.189	Seriola_lalandi_dorsalis
ENSORLG00020010012	hdlbpb	100	82.320	ENSSPUG00000018688	-	100	82.320	Sphenodon_punctatus
ENSORLG00020010012	hdlbpb	100	95.741	ENSSPAG00000016969	hdlbpb	100	95.741	Stegastes_partitus
ENSORLG00020010012	hdlbpb	98	91.528	ENSTRUG00000012888	hdlbpb	99	91.528	Takifugu_rubripes
ENSORLG00020010012	hdlbpb	99	92.717	ENSTNIG00000002555	hdlbpb	100	92.717	Tetraodon_nigroviridis
ENSORLG00020010012	hdlbpb	100	67.908	ENSXCOG00000001797	hdlbpb	100	83.274	Xiphophorus_couchianus
ENSORLG00020010012	hdlbpb	100	94.479	ENSXMAG00000015633	hdlbpb	100	94.479	Xiphophorus_maculatus