EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020010074 (Gene tree)
Gene ID: -
Gene Symbol: arl5c
Alias: -
Full Name: ADP-ribosylation factor-like protein 5C
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 3730 bases
Position: chr8:4986784-4990513
Accession: 101156976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020009162	MMR_HSR1	PF01926.23	3e-08	1	1
ENSORLP00020027206	MMR_HSR1	PF01926.23	3.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020015465	-	2225	-	ENSORLP00020027206	179 (aa)	XP_004071314	UPI0002A493BC
ENSORLT00020015475	-	2357	-	ENSORLP00020009162	164 (aa)	-	-

Gene Model

Click here to download ENSORLG00020010074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020010074's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020010074	arl5c	100	40.606	ENSORLG00020002949	arl3	95	40.000
ENSORLG00020010074	arl5c	91	35.333	ENSORLG00020012167	arl2	84	36.478
ENSORLG00020010074	arl5c	72	30.894	ENSORLG00020013719	rab25b	59	30.894
ENSORLG00020010074	arl5c	90	37.838	ENSORLG00020008107	arl11	86	38.255
ENSORLG00020010074	arl5c	95	31.410	ENSORLG00020004126	arl8a	81	31.410
ENSORLG00020010074	arl5c	98	36.747	ENSORLG00020015550	ARL6	98	36.313
ENSORLG00020010074	arl5c	100	40.606	ENSORLG00020019239	-	95	39.306
ENSORLG00020010074	arl5c	99	44.172	ENSORLG00020005754	arl1	94	43.275
ENSORLG00020010074	arl5c	89	42.484	ENSORLG00020011692	-	87	39.759
ENSORLG00020010074	arl5c	98	37.126	ENSORLG00020003428	-	71	37.500
ENSORLG00020010074	arl5c	92	39.073	ENSORLG00020012894	arl3l2	88	37.195
ENSORLG00020010074	arl5c	100	45.455	ENSORLG00020007477	-	98	45.198
ENSORLG00020010074	arl5c	100	71.951	ENSORLG00020009947	arl8	98	70.286
ENSORLG00020010074	arl5c	100	45.122	ENSORLG00020006712	-	98	44.886
ENSORLG00020010074	arl5c	95	30.769	ENSORLG00020002055	arl8bb	82	30.769
ENSORLG00020010074	arl5c	100	45.455	ENSORLG00020005379	arf3b	98	45.198
ENSORLG00020010074	arl5c	100	71.341	ENSORLG00020017337	ARL5A	99	69.101
ENSORLG00020010074	arl5c	91	43.046	ENSORLG00020003354	-	89	43.046
ENSORLG00020010074	arl5c	89	45.455	ENSORLG00020007137	arl4cb	86	43.713
ENSORLG00020010074	arl5c	95	47.097	ENSORLG00020000480	-	92	46.707
ENSORLG00020010074	arl5c	89	42.105	ENSORLG00020011342	arl4aa	87	41.212
ENSORLG00020010074	arl5c	70	34.211	ENSORLG00020005458	sar1ab	58	34.211
ENSORLG00020010074	arl5c	100	42.424	ENSORLG00020001755	-	100	41.667
ENSORLG00020010074	arl5c	94	38.554	ENSORLG00020004500	arfrp1	89	38.122
ENSORLG00020010074	arl5c	96	47.134	ENSORLG00020007962	-	97	46.746
ENSORLG00020010074	arl5c	100	39.645	ENSORLG00020014120	arl14	89	39.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020010074	arl5c	100	85.366	ENSAPOG00000005821	arl5c	100	84.358	Acanthochromis_polyacanthus
ENSORLG00020010074	arl5c	92	85.366	ENSACIG00000008975	arl5c	91	85.366	Amphilophus_citrinellus
ENSORLG00020010074	arl5c	100	87.805	ENSAOCG00000010448	arl5c	100	86.592	Amphiprion_ocellaris
ENSORLG00020010074	arl5c	100	87.805	ENSAPEG00000002699	arl5c	100	86.592	Amphiprion_percula
ENSORLG00020010074	arl5c	100	83.240	ENSATEG00000000181	arl5c	100	83.240	Anabas_testudineus
ENSORLG00020010074	arl5c	100	84.756	ENSACLG00000000922	arl5c	100	84.756	Astatotilapia_calliptera
ENSORLG00020010074	arl5c	100	78.659	ENSAMXG00000031771	arl5c	100	77.654	Astyanax_mexicanus
ENSORLG00020010074	arl5c	100	84.146	ENSCSEG00000009845	arl5c	100	82.682	Cynoglossus_semilaevis
ENSORLG00020010074	arl5c	100	87.195	ENSCVAG00000012706	arl5c	99	86.441	Cyprinodon_variegatus
ENSORLG00020010074	arl5c	100	77.439	ENSDARG00000035719	arl5c	100	77.095	Danio_rerio
ENSORLG00020010074	arl5c	100	82.927	ENSELUG00000016864	arl5c	100	81.006	Esox_lucius
ENSORLG00020010074	arl5c	100	89.024	ENSFHEG00000013677	arl5c	100	88.268	Fundulus_heteroclitus
ENSORLG00020010074	arl5c	100	85.976	ENSGAFG00000002547	arl5c	100	84.916	Gambusia_affinis
ENSORLG00020010074	arl5c	100	87.805	ENSGACG00000009321	arl5c	98	86.932	Gasterosteus_aculeatus
ENSORLG00020010074	arl5c	100	84.756	ENSHBUG00000007301	arl5c	100	84.358	Haplochromis_burtoni
ENSORLG00020010074	arl5c	100	81.098	ENSHCOG00000017576	-	100	79.888	Hippocampus_comes
ENSORLG00020010074	arl5c	100	78.049	ENSIPUG00000023232	arl5c	100	77.095	Ictalurus_punctatus
ENSORLG00020010074	arl5c	100	87.195	ENSKMAG00000011323	arl5c	100	86.592	Kryptolebias_marmoratus
ENSORLG00020010074	arl5c	100	85.976	ENSLBEG00000006177	arl5c	86	85.475	Labrus_bergylta
ENSORLG00020010074	arl5c	100	86.585	ENSMAMG00000022157	arl5c	100	84.916	Mastacembelus_armatus
ENSORLG00020010074	arl5c	100	84.756	ENSMZEG00005022925	arl5c	100	84.358	Maylandia_zebra
ENSORLG00020010074	arl5c	91	85.906	ENSMMOG00000020851	arl5c	96	84.756	Mola_mola
ENSORLG00020010074	arl5c	92	85.366	ENSMALG00000009306	arl5c	93	85.366	Monopterus_albus
ENSORLG00020010074	arl5c	100	85.366	ENSNBRG00000020245	arl5c	100	85.366	Neolamprologus_brichardi
ENSORLG00020010074	arl5c	100	84.146	ENSONIG00000000890	arl5c	99	83.799	Oreochromis_niloticus
ENSORLG00020010074	arl5c	100	100.000	ENSORLG00000002960	arl5c	100	100.000	Oryzias_latipes
ENSORLG00020010074	arl5c	100	100.000	ENSORLG00015002752	arl5c	100	100.000	Oryzias_latipes_hsok
ENSORLG00020010074	arl5c	97	95.954	ENSOMEG00000021718	arl5c	98	95.954	Oryzias_melastigma
ENSORLG00020010074	arl5c	100	81.098	ENSPKIG00000021727	arl5c	100	79.330	Paramormyrops_kingsleyae
ENSORLG00020010074	arl5c	100	86.585	ENSPFOG00000007842	arl5c	99	86.034	Poecilia_formosa
ENSORLG00020010074	arl5c	100	86.585	ENSPLAG00000002394	arl5c	100	86.034	Poecilia_latipinna
ENSORLG00020010074	arl5c	91	86.503	ENSPMEG00000000631	arl5c	94	86.503	Poecilia_mexicana
ENSORLG00020010074	arl5c	100	87.195	ENSPREG00000008730	arl5c	100	86.592	Poecilia_reticulata
ENSORLG00020010074	arl5c	100	84.756	ENSPNYG00000012720	arl5c	100	84.756	Pundamilia_nyererei
ENSORLG00020010074	arl5c	100	78.049	ENSPNAG00000002310	arl5c	100	77.095	Pygocentrus_nattereri
ENSORLG00020010074	arl5c	100	79.878	ENSSFOG00015023529	arl5c	100	78.212	Scleropages_formosus
ENSORLG00020010074	arl5c	100	86.585	ENSSMAG00000010552	arl5c	100	85.475	Scophthalmus_maximus
ENSORLG00020010074	arl5c	100	84.146	ENSSDUG00000022640	arl5c	100	83.240	Seriola_dumerili
ENSORLG00020010074	arl5c	100	84.146	ENSSLDG00000000728	arl5c	100	83.240	Seriola_lalandi_dorsalis
ENSORLG00020010074	arl5c	100	85.976	ENSSPAG00000007687	arl5c	100	85.475	Stegastes_partitus
ENSORLG00020010074	arl5c	100	84.146	ENSTRUG00000022814	arl5c	100	83.799	Takifugu_rubripes
ENSORLG00020010074	arl5c	100	83.537	ENSTNIG00000003015	arl5c	99	83.240	Tetraodon_nigroviridis
ENSORLG00020010074	arl5c	100	86.585	ENSXCOG00000017380	arl5c	99	86.441	Xiphophorus_couchianus
ENSORLG00020010074	arl5c	100	85.976	ENSXMAG00000008447	arl5c	99	85.876	Xiphophorus_maculatus