EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020010206 (Gene tree)
Gene ID: -
Gene Symbol: thumpd1
Alias: -
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5932 bases
Position: chr1:22314474-22320405
Accession: ZDB-GENE-040426-1805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020009305	THUMP	PF02926.17	1.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020015655	-	1910	-	ENSORLP00020009305	306 (aa)	-	-

Gene Model

Click here to download ENSORLG00020010206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020010206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020010206	thumpd1	84	56.981	ENSG00000066654	THUMPD1	88	48.438	Homo_sapiens
ENSORLG00020010206	thumpd1	99	75.394	ENSAPOG00000008440	thumpd1	98	77.287	Acanthochromis_polyacanthus
ENSORLG00020010206	thumpd1	97	53.205	ENSAMEG00000006257	THUMPD1	86	53.205	Ailuropoda_melanoleuca
ENSORLG00020010206	thumpd1	91	80.986	ENSACIG00000024395	thumpd1	88	80.836	Amphilophus_citrinellus
ENSORLG00020010206	thumpd1	99	75.710	ENSAOCG00000003509	thumpd1	98	77.287	Amphiprion_ocellaris
ENSORLG00020010206	thumpd1	99	76.266	ENSAPEG00000010515	thumpd1	98	78.165	Amphiprion_percula
ENSORLG00020010206	thumpd1	99	77.070	ENSATEG00000004737	thumpd1	98	77.070	Anabas_testudineus
ENSORLG00020010206	thumpd1	87	56.522	ENSAPLG00000015259	THUMPD1	88	59.524	Anas_platyrhynchos
ENSORLG00020010206	thumpd1	92	52.333	ENSACAG00000009625	-	85	56.667	Anolis_carolinensis
ENSORLG00020010206	thumpd1	75	49.362	ENSANAG00000027040	-	62	49.362	Aotus_nancymaae
ENSORLG00020010206	thumpd1	84	47.909	ENSANAG00000027311	-	75	47.909	Aotus_nancymaae
ENSORLG00020010206	thumpd1	75	62.128	ENSANAG00000026882	-	67	62.128	Aotus_nancymaae
ENSORLG00020010206	thumpd1	96	75.817	ENSACLG00000004830	thumpd1	91	79.522	Astatotilapia_calliptera
ENSORLG00020010206	thumpd1	97	56.550	ENSAMXG00000012356	thumpd1	78	64.202	Astyanax_mexicanus
ENSORLG00020010206	thumpd1	82	58.366	ENSBTAG00000047673	THUMPD1	72	58.366	Bos_taurus
ENSORLG00020010206	thumpd1	75	61.702	ENSCJAG00000009499	THUMPD1	67	61.702	Callithrix_jacchus
ENSORLG00020010206	thumpd1	89	54.770	ENSCAFG00000017985	THUMPD1	79	54.770	Canis_familiaris
ENSORLG00020010206	thumpd1	89	54.770	ENSCAFG00020021861	THUMPD1	79	54.770	Canis_lupus_dingo
ENSORLG00020010206	thumpd1	82	59.375	ENSCHIG00000010134	THUMPD1	71	59.375	Capra_hircus
ENSORLG00020010206	thumpd1	78	60.494	ENSTSYG00000011537	THUMPD1	69	60.494	Carlito_syrichta
ENSORLG00020010206	thumpd1	78	62.397	ENSCPOG00000008919	-	68	62.397	Cavia_porcellus
ENSORLG00020010206	thumpd1	78	62.397	ENSCPOG00000023684	-	68	62.397	Cavia_porcellus
ENSORLG00020010206	thumpd1	75	61.702	ENSCCAG00000030205	THUMPD1	67	61.702	Cebus_capucinus
ENSORLG00020010206	thumpd1	90	52.313	ENSCCAG00000019379	-	59	58.298	Cebus_capucinus
ENSORLG00020010206	thumpd1	82	49.049	ENSCATG00000020844	-	72	49.049	Cercocebus_atys
ENSORLG00020010206	thumpd1	75	62.128	ENSCATG00000040309	THUMPD1	67	62.128	Cercocebus_atys
ENSORLG00020010206	thumpd1	75	63.248	ENSCLAG00000016508	THUMPD1	66	63.248	Chinchilla_lanigera
ENSORLG00020010206	thumpd1	75	62.128	ENSCSAG00000007610	THUMPD1	67	62.128	Chlorocebus_sabaeus
ENSORLG00020010206	thumpd1	95	40.584	ENSCSAG00000009860	-	60	42.857	Chlorocebus_sabaeus
ENSORLG00020010206	thumpd1	75	62.821	ENSCHOG00000005587	THUMPD1	66	62.821	Choloepus_hoffmanni
ENSORLG00020010206	thumpd1	95	57.143	ENSCPBG00000019055	THUMPD1	75	61.887	Chrysemys_picta_bellii
ENSORLG00020010206	thumpd1	81	31.111	ENSCING00000021274	-	95	31.111	Ciona_intestinalis
ENSORLG00020010206	thumpd1	71	55.804	ENSCANG00000038770	THUMPD1	72	55.804	Colobus_angolensis_palliatus
ENSORLG00020010206	thumpd1	72	56.502	ENSCANG00000035822	-	72	56.502	Colobus_angolensis_palliatus
ENSORLG00020010206	thumpd1	88	56.777	ENSCGRG00001014829	Thumpd1	69	61.983	Cricetulus_griseus_chok1gshd
ENSORLG00020010206	thumpd1	86	56.877	ENSCGRG00000000060	Thumpd1	69	61.983	Cricetulus_griseus_crigri
ENSORLG00020010206	thumpd1	99	72.222	ENSCSEG00000002041	thumpd1	84	80.460	Cynoglossus_semilaevis
ENSORLG00020010206	thumpd1	91	75.862	ENSCVAG00000014960	thumpd1	90	75.862	Cyprinodon_variegatus
ENSORLG00020010206	thumpd1	83	59.843	ENSDARG00000100264	thumpd1	73	59.843	Danio_rerio
ENSORLG00020010206	thumpd1	83	59.542	ENSDNOG00000043510	THUMPD1	73	59.542	Dasypus_novemcinctus
ENSORLG00020010206	thumpd1	75	61.345	ENSDORG00000028216	Thumpd1	67	62.185	Dipodomys_ordii
ENSORLG00020010206	thumpd1	89	31.293	FBgn0035532	CG15014	83	31.636	Drosophila_melanogaster
ENSORLG00020010206	thumpd1	89	52.330	ENSETEG00000002763	THUMPD1	65	52.330	Echinops_telfairi
ENSORLG00020010206	thumpd1	82	42.803	ENSEBUG00000011011	THUMPD1	71	42.803	Eptatretus_burgeri
ENSORLG00020010206	thumpd1	83	59.459	ENSECAG00000005354	THUMPD1	73	59.459	Equus_caballus
ENSORLG00020010206	thumpd1	84	58.868	ENSEEUG00000011256	THUMPD1	63	58.868	Erinaceus_europaeus
ENSORLG00020010206	thumpd1	92	69.825	ENSELUG00000013612	thumpd1	66	71.228	Esox_lucius
ENSORLG00020010206	thumpd1	89	54.545	ENSFCAG00000039296	THUMPD1	80	54.545	Felis_catus
ENSORLG00020010206	thumpd1	74	58.051	ENSFALG00000014029	THUMPD1	85	59.322	Ficedula_albicollis
ENSORLG00020010206	thumpd1	91	76.370	ENSFHEG00000013319	thumpd1	84	78.425	Fundulus_heteroclitus
ENSORLG00020010206	thumpd1	95	66.555	ENSGMOG00000003369	thumpd1	88	68.683	Gadus_morhua
ENSORLG00020010206	thumpd1	58	54.237	ENSGALG00000031384	-	72	59.494	Gallus_gallus
ENSORLG00020010206	thumpd1	99	75.563	ENSGAFG00000011000	thumpd1	89	79.791	Gambusia_affinis
ENSORLG00020010206	thumpd1	98	71.656	ENSGACG00000019511	thumpd1	82	80.597	Gasterosteus_aculeatus
ENSORLG00020010206	thumpd1	95	56.811	ENSGAGG00000008225	THUMPD1	80	63.035	Gopherus_agassizii
ENSORLG00020010206	thumpd1	75	61.702	ENSGGOG00000005231	-	54	61.702	Gorilla_gorilla
ENSORLG00020010206	thumpd1	65	49.020	ENSGGOG00000043232	-	63	49.020	Gorilla_gorilla
ENSORLG00020010206	thumpd1	96	75.817	ENSHBUG00000017996	thumpd1	91	79.522	Haplochromis_burtoni
ENSORLG00020010206	thumpd1	59	49.171	ENSHGLG00000000952	-	64	55.782	Heterocephalus_glaber_female
ENSORLG00020010206	thumpd1	89	57.295	ENSHGLG00000011001	-	66	64.103	Heterocephalus_glaber_female
ENSORLG00020010206	thumpd1	89	57.295	ENSHGLG00100016023	THUMPD1	66	64.103	Heterocephalus_glaber_male
ENSORLG00020010206	thumpd1	59	49.171	ENSHGLG00100010577	-	64	55.782	Heterocephalus_glaber_male
ENSORLG00020010206	thumpd1	88	63.941	ENSHCOG00000008618	thumpd1	59	63.941	Hippocampus_comes
ENSORLG00020010206	thumpd1	75	63.596	ENSIPUG00000012500	thumpd1	62	61.240	Ictalurus_punctatus
ENSORLG00020010206	thumpd1	90	56.537	ENSSTOG00000007011	THUMPD1	69	61.317	Ictidomys_tridecemlineatus
ENSORLG00020010206	thumpd1	82	56.471	ENSJJAG00000004295	-	72	56.471	Jaculus_jaculus
ENSORLG00020010206	thumpd1	90	62.238	ENSKMAG00000009545	thumpd1	64	65.517	Kryptolebias_marmoratus
ENSORLG00020010206	thumpd1	99	73.354	ENSLBEG00000009349	thumpd1	98	73.981	Labrus_bergylta
ENSORLG00020010206	thumpd1	82	60.777	ENSLACG00000005833	THUMPD1	77	60.777	Latimeria_chalumnae
ENSORLG00020010206	thumpd1	85	65.660	ENSLOCG00000000854	thumpd1	84	65.660	Lepisosteus_oculatus
ENSORLG00020010206	thumpd1	98	52.090	ENSLAFG00000025838	THUMPD1	72	58.527	Loxodonta_africana
ENSORLG00020010206	thumpd1	75	62.128	ENSMFAG00000036996	THUMPD1	67	62.128	Macaca_fascicularis
ENSORLG00020010206	thumpd1	72	52.632	ENSMFAG00000041474	-	72	52.632	Macaca_fascicularis
ENSORLG00020010206	thumpd1	72	52.632	ENSMMUG00000038414	-	72	52.632	Macaca_mulatta
ENSORLG00020010206	thumpd1	75	62.128	ENSMMUG00000004225	THUMPD1	67	62.128	Macaca_mulatta
ENSORLG00020010206	thumpd1	72	52.632	ENSMNEG00000038856	-	72	52.632	Macaca_nemestrina
ENSORLG00020010206	thumpd1	75	62.128	ENSMNEG00000020726	THUMPD1	67	62.128	Macaca_nemestrina
ENSORLG00020010206	thumpd1	75	62.128	ENSMLEG00000036436	THUMPD1	67	62.128	Mandrillus_leucophaeus
ENSORLG00020010206	thumpd1	72	53.097	ENSMLEG00000030012	-	72	53.097	Mandrillus_leucophaeus
ENSORLG00020010206	thumpd1	97	77.124	ENSMAMG00000006858	thumpd1	96	76.774	Mastacembelus_armatus
ENSORLG00020010206	thumpd1	96	75.817	ENSMZEG00005013693	thumpd1	91	79.522	Maylandia_zebra
ENSORLG00020010206	thumpd1	70	55.869	ENSMGAG00000010340	THUMPD1	97	59.000	Meleagris_gallopavo
ENSORLG00020010206	thumpd1	86	59.623	ENSMAUG00000013306	Thumpd1	73	59.623	Mesocricetus_auratus
ENSORLG00020010206	thumpd1	68	51.628	ENSMICG00000030865	-	61	51.628	Microcebus_murinus
ENSORLG00020010206	thumpd1	75	62.979	ENSMICG00000038483	-	66	62.979	Microcebus_murinus
ENSORLG00020010206	thumpd1	86	56.134	ENSMOCG00000003447	Thumpd1	76	56.134	Microtus_ochrogaster
ENSORLG00020010206	thumpd1	87	78.229	ENSMMOG00000011323	thumpd1	81	78.229	Mola_mola
ENSORLG00020010206	thumpd1	87	58.608	ENSMODG00000024776	-	74	60.886	Monodelphis_domestica
ENSORLG00020010206	thumpd1	97	54.662	ENSMODG00000006971	-	73	60.517	Monodelphis_domestica
ENSORLG00020010206	thumpd1	87	81.784	ENSMALG00000019522	thumpd1	91	80.702	Monopterus_albus
ENSORLG00020010206	thumpd1	78	61.157	MGP_CAROLIEiJ_G0030382	Thumpd1	69	61.157	Mus_caroli
ENSORLG00020010206	thumpd1	78	61.570	ENSMUSG00000030942	Thumpd1	69	61.570	Mus_musculus
ENSORLG00020010206	thumpd1	78	62.295	MGP_PahariEiJ_G0013593	Thumpd1	69	62.295	Mus_pahari
ENSORLG00020010206	thumpd1	82	59.055	ENSMLUG00000010547	THUMPD1	71	59.055	Myotis_lucifugus
ENSORLG00020010206	thumpd1	89	55.872	ENSNGAG00000018643	Thumpd1	67	63.404	Nannospalax_galili
ENSORLG00020010206	thumpd1	96	74.919	ENSNBRG00000006987	thumpd1	85	78.912	Neolamprologus_brichardi
ENSORLG00020010206	thumpd1	84	57.358	ENSNLEG00000012369	THUMPD1	75	57.358	Nomascus_leucogenys
ENSORLG00020010206	thumpd1	84	57.414	ENSODEG00000012360	THUMPD1	66	61.966	Octodon_degus
ENSORLG00020010206	thumpd1	90	78.671	ENSONIG00000000146	thumpd1	100	80.420	Oreochromis_niloticus
ENSORLG00020010206	thumpd1	93	56.507	ENSOANG00000014297	THUMPD1	74	59.259	Ornithorhynchus_anatinus
ENSORLG00020010206	thumpd1	83	59.615	ENSOCUG00000009895	-	74	59.615	Oryctolagus_cuniculus
ENSORLG00020010206	thumpd1	100	99.023	ENSORLG00000027557	thumpd1	100	99.023	Oryzias_latipes
ENSORLG00020010206	thumpd1	100	98.693	ENSORLG00015009581	thumpd1	100	98.693	Oryzias_latipes_hsok
ENSORLG00020010206	thumpd1	100	84.923	ENSOMEG00000019361	thumpd1	100	86.154	Oryzias_melastigma
ENSORLG00020010206	thumpd1	83	58.077	ENSOGAG00000026723	THUMPD1	66	61.702	Otolemur_garnettii
ENSORLG00020010206	thumpd1	82	58.755	ENSOARG00000013107	THUMPD1	71	58.755	Ovis_aries
ENSORLG00020010206	thumpd1	84	56.981	ENSPPAG00000033818	-	54	61.277	Pan_paniscus
ENSORLG00020010206	thumpd1	72	52.889	ENSPPAG00000001653	-	68	52.889	Pan_paniscus
ENSORLG00020010206	thumpd1	89	55.245	ENSPPRG00000014118	-	80	55.245	Panthera_pardus
ENSORLG00020010206	thumpd1	97	52.412	ENSPTIG00000013856	-	80	55.245	Panthera_tigris_altaica
ENSORLG00020010206	thumpd1	69	50.463	ENSPTRG00000046073	-	64	50.463	Pan_troglodytes
ENSORLG00020010206	thumpd1	84	56.981	ENSPTRG00000007848	THUMPD1	54	61.277	Pan_troglodytes
ENSORLG00020010206	thumpd1	75	62.128	ENSPANG00000025507	THUMPD1	67	62.128	Papio_anubis
ENSORLG00020010206	thumpd1	72	53.070	ENSPANG00000034881	-	72	53.070	Papio_anubis
ENSORLG00020010206	thumpd1	90	63.309	ENSPKIG00000014491	thumpd1	85	63.669	Paramormyrops_kingsleyae
ENSORLG00020010206	thumpd1	85	58.955	ENSPSIG00000012430	THUMPD1	92	59.176	Pelodiscus_sinensis
ENSORLG00020010206	thumpd1	82	74.806	ENSPMGG00000014479	thumpd1	90	74.806	Periophthalmus_magnuspinnatus
ENSORLG00020010206	thumpd1	51	44.586	ENSPEMG00000002608	-	62	45.223	Peromyscus_maniculatus_bairdii
ENSORLG00020010206	thumpd1	64	47.291	ENSPMAG00000001389	thumpd1	88	49.189	Petromyzon_marinus
ENSORLG00020010206	thumpd1	75	63.983	ENSPCIG00000029241	THUMPD1	51	61.390	Phascolarctos_cinereus
ENSORLG00020010206	thumpd1	99	76.038	ENSPFOG00000012649	thumpd1	89	79.514	Poecilia_formosa
ENSORLG00020010206	thumpd1	99	75.241	ENSPLAG00000000137	thumpd1	97	75.962	Poecilia_latipinna
ENSORLG00020010206	thumpd1	99	76.282	ENSPMEG00000007750	thumpd1	89	79.791	Poecilia_mexicana
ENSORLG00020010206	thumpd1	84	80.074	ENSPREG00000000144	thumpd1	92	79.853	Poecilia_reticulata
ENSORLG00020010206	thumpd1	60	61.957	ENSPPYG00000007160	-	67	61.957	Pongo_abelii
ENSORLG00020010206	thumpd1	62	62.105	ENSPCAG00000001534	THUMPD1	67	62.105	Procavia_capensis
ENSORLG00020010206	thumpd1	75	62.979	ENSPCOG00000024663	THUMPD1	66	62.979	Propithecus_coquereli
ENSORLG00020010206	thumpd1	75	59.574	ENSPVAG00000005659	-	65	59.574	Pteropus_vampyrus
ENSORLG00020010206	thumpd1	96	75.817	ENSPNYG00000007061	thumpd1	90	79.522	Pundamilia_nyererei
ENSORLG00020010206	thumpd1	93	59.468	ENSPNAG00000024872	thumpd1	84	66.537	Pygocentrus_nattereri
ENSORLG00020010206	thumpd1	75	62.128	ENSRBIG00000040752	THUMPD1	67	62.128	Rhinopithecus_bieti
ENSORLG00020010206	thumpd1	72	56.951	ENSRBIG00000040136	-	75	56.951	Rhinopithecus_bieti
ENSORLG00020010206	thumpd1	75	62.128	ENSRROG00000042189	THUMPD1	67	62.128	Rhinopithecus_roxellana
ENSORLG00020010206	thumpd1	72	56.502	ENSRROG00000045699	-	75	56.502	Rhinopithecus_roxellana
ENSORLG00020010206	thumpd1	84	57.519	ENSSBOG00000034246	THUMPD1	75	57.519	Saimiri_boliviensis_boliviensis
ENSORLG00020010206	thumpd1	93	56.849	ENSSHAG00000003853	THUMPD1	71	61.961	Sarcophilus_harrisii
ENSORLG00020010206	thumpd1	90	56.786	ENSSFOG00015007512	thumpd1	85	56.786	Scleropages_formosus
ENSORLG00020010206	thumpd1	99	74.074	ENSSMAG00000000723	thumpd1	98	75.617	Scophthalmus_maximus
ENSORLG00020010206	thumpd1	96	79.605	ENSSDUG00000014502	thumpd1	90	82.699	Seriola_dumerili
ENSORLG00020010206	thumpd1	96	78.947	ENSSLDG00000007694	thumpd1	90	82.007	Seriola_lalandi_dorsalis
ENSORLG00020010206	thumpd1	95	54.575	ENSSPUG00000005096	THUMPD1	86	58.719	Sphenodon_punctatus
ENSORLG00020010206	thumpd1	99	78.413	ENSSPAG00000006993	thumpd1	98	80.317	Stegastes_partitus
ENSORLG00020010206	thumpd1	75	63.559	ENSSSCG00000024748	THUMPD1	66	63.559	Sus_scrofa
ENSORLG00020010206	thumpd1	86	57.455	ENSTGUG00000009247	THUMPD1	91	61.508	Taeniopygia_guttata
ENSORLG00020010206	thumpd1	91	78.819	ENSTRUG00000015656	thumpd1	89	78.819	Takifugu_rubripes
ENSORLG00020010206	thumpd1	86	80.524	ENSTNIG00000001584	thumpd1	88	81.273	Tetraodon_nigroviridis
ENSORLG00020010206	thumpd1	97	52.459	ENSTBEG00000005252	THUMPD1	65	57.364	Tupaia_belangeri
ENSORLG00020010206	thumpd1	75	62.979	ENSTTRG00000016435	THUMPD1	66	62.979	Tursiops_truncatus
ENSORLG00020010206	thumpd1	58	47.849	ENSUAMG00000005779	-	81	47.849	Ursus_americanus
ENSORLG00020010206	thumpd1	82	59.144	ENSVPAG00000003422	THUMPD1	73	59.144	Vicugna_pacos
ENSORLG00020010206	thumpd1	75	61.702	ENSVVUG00000023241	THUMPD1	65	61.702	Vulpes_vulpes
ENSORLG00020010206	thumpd1	64	61.111	ENSXETG00000005539	thumpd1	99	48.789	Xenopus_tropicalis
ENSORLG00020010206	thumpd1	91	79.094	ENSXMAG00000026052	thumpd1	97	76.282	Xiphophorus_maculatus