EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020010313 (Gene tree)
Gene ID: -
Gene Symbol: parn
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 11315 bases
Position: chr1:22284177-22295491
Accession: 101157188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020027376	RNA_bind	PF08675.11	1.7e-32	1	1
ENSORLP00020027376	CAF1	PF04857.20	4.3e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020015816	-	3143	XM_023958584	ENSORLP00020027376	669 (aa)	XP_023814352	-

Gene Model

Click here to download ENSORLG00020010313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020010313's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020010313	parn	88	70.984	ENSG00000140694	PARN	93	79.661	Homo_sapiens
ENSORLG00020010313	parn	100	64.255	ENSAMEG00000011208	PARN	83	76.909	Ailuropoda_melanoleuca
ENSORLG00020010313	parn	88	77.934	ENSACIG00000000619	parn	99	78.091	Amphilophus_citrinellus
ENSORLG00020010313	parn	100	82.267	ENSAOCG00000003465	parn	100	82.122	Amphiprion_ocellaris
ENSORLG00020010313	parn	73	88.595	ENSAPEG00000010661	parn	94	88.595	Amphiprion_percula
ENSORLG00020010313	parn	100	82.044	ENSATEG00000004661	parn	100	81.752	Anabas_testudineus
ENSORLG00020010313	parn	99	64.671	ENSAPLG00000013914	PARN	99	64.159	Anas_platyrhynchos
ENSORLG00020010313	parn	85	72.449	ENSACAG00000004973	PARN	90	72.128	Anolis_carolinensis
ENSORLG00020010313	parn	86	72.881	ENSANAG00000031516	PARN	91	79.661	Aotus_nancymaae
ENSORLG00020010313	parn	100	81.471	ENSACLG00000004742	parn	100	81.525	Astatotilapia_calliptera
ENSORLG00020010313	parn	100	72.280	ENSAMXG00000012390	parn	97	74.959	Astyanax_mexicanus
ENSORLG00020010313	parn	88	67.981	ENSBTAG00000018097	PARN	95	67.981	Bos_taurus
ENSORLG00020010313	parn	86	72.881	ENSCJAG00000015866	PARN	91	79.661	Callithrix_jacchus
ENSORLG00020010313	parn	96	67.130	ENSCAFG00000018795	PARN	90	72.712	Canis_familiaris
ENSORLG00020010313	parn	96	67.284	ENSCAFG00020024126	PARN	90	72.884	Canis_lupus_dingo
ENSORLG00020010313	parn	85	73.116	ENSCHIG00000018143	PARN	91	73.116	Capra_hircus
ENSORLG00020010313	parn	71	50.813	ENSCAPG00000007984	PARN	79	50.813	Cavia_aperea
ENSORLG00020010313	parn	85	71.966	ENSCPOG00000002263	PARN	91	71.966	Cavia_porcellus
ENSORLG00020010313	parn	86	72.881	ENSCCAG00000030367	PARN	91	79.661	Cebus_capucinus
ENSORLG00020010313	parn	80	77.612	ENSCATG00000041368	PARN	95	77.612	Cercocebus_atys
ENSORLG00020010313	parn	85	72.696	ENSCLAG00000015406	PARN	91	72.696	Chinchilla_lanigera
ENSORLG00020010313	parn	88	71.311	ENSCSAG00000008142	PARN	95	71.311	Chlorocebus_sabaeus
ENSORLG00020010313	parn	84	56.920	ENSCHOG00000007014	PARN	91	56.920	Choloepus_hoffmanni
ENSORLG00020010313	parn	79	69.945	ENSCPBG00000006609	PARN	94	69.945	Chrysemys_picta_bellii
ENSORLG00020010313	parn	76	42.135	ENSCING00000010142	-	99	41.760	Ciona_intestinalis
ENSORLG00020010313	parn	88	60.287	ENSCANG00000028849	-	92	79.661	Colobus_angolensis_palliatus
ENSORLG00020010313	parn	85	73.310	ENSCGRG00001012096	Parn	91	73.310	Cricetulus_griseus_chok1gshd
ENSORLG00020010313	parn	85	73.310	ENSCGRG00000004939	Parn	91	73.310	Cricetulus_griseus_crigri
ENSORLG00020010313	parn	100	78.426	ENSCSEG00000002064	parn	100	78.280	Cynoglossus_semilaevis
ENSORLG00020010313	parn	100	84.288	ENSCVAG00000014848	parn	100	83.994	Cyprinodon_variegatus
ENSORLG00020010313	parn	100	67.257	ENSDARG00000102634	parn	100	79.091	Danio_rerio
ENSORLG00020010313	parn	88	70.984	ENSDNOG00000000833	PARN	94	77.799	Dasypus_novemcinctus
ENSORLG00020010313	parn	62	72.727	ENSETEG00000014828	-	69	72.727	Echinops_telfairi
ENSORLG00020010313	parn	88	70.164	ENSEASG00005011400	PARN	91	72.603	Equus_asinus_asinus
ENSORLG00020010313	parn	88	69.836	ENSECAG00000017792	PARN	91	72.260	Equus_caballus
ENSORLG00020010313	parn	87	63.514	ENSEEUG00000010370	PARN	82	63.514	Erinaceus_europaeus
ENSORLG00020010313	parn	100	72.953	ENSELUG00000013139	parn	90	72.661	Esox_lucius
ENSORLG00020010313	parn	85	72.712	ENSFCAG00000044961	PARN	86	77.966	Felis_catus
ENSORLG00020010313	parn	87	71.070	ENSFALG00000003911	PARN	93	71.119	Ficedula_albicollis
ENSORLG00020010313	parn	85	72.125	ENSFDAG00000009234	PARN	91	72.125	Fukomys_damarensis
ENSORLG00020010313	parn	88	79.070	ENSFHEG00000013738	parn	92	91.525	Fundulus_heteroclitus
ENSORLG00020010313	parn	82	83.029	ENSGMOG00000003231	parn	99	83.029	Gadus_morhua
ENSORLG00020010313	parn	85	72.461	ENSGALG00000003091	PARN	91	72.461	Gallus_gallus
ENSORLG00020010313	parn	100	81.778	ENSGAFG00000011061	parn	100	81.633	Gambusia_affinis
ENSORLG00020010313	parn	100	74.298	ENSGACG00000019501	parn	99	80.488	Gasterosteus_aculeatus
ENSORLG00020010313	parn	88	70.984	ENSGGOG00000025224	PARN	96	79.661	Gorilla_gorilla
ENSORLG00020010313	parn	100	82.111	ENSHBUG00000017906	parn	100	82.111	Haplochromis_burtoni
ENSORLG00020010313	parn	85	71.966	ENSHGLG00000010886	PARN	98	68.262	Heterocephalus_glaber_female
ENSORLG00020010313	parn	85	71.966	ENSHGLG00100014659	PARN	98	68.262	Heterocephalus_glaber_male
ENSORLG00020010313	parn	81	80.952	ENSHCOG00000008683	parn	94	80.952	Hippocampus_comes
ENSORLG00020010313	parn	100	62.537	ENSIPUG00000012401	parn	100	61.856	Ictalurus_punctatus
ENSORLG00020010313	parn	84	73.448	ENSSTOG00000007519	PARN	91	73.448	Ictidomys_tridecemlineatus
ENSORLG00020010313	parn	86	72.759	ENSJJAG00000023049	Parn	92	72.759	Jaculus_jaculus
ENSORLG00020010313	parn	100	84.604	ENSKMAG00000009462	parn	100	84.457	Kryptolebias_marmoratus
ENSORLG00020010313	parn	93	83.943	ENSLBEG00000009167	parn	97	84.765	Labrus_bergylta
ENSORLG00020010313	parn	75	74.059	ENSLACG00000004207	PARN	100	73.585	Latimeria_chalumnae
ENSORLG00020010313	parn	100	70.494	ENSLOCG00000000715	parn	100	69.913	Lepisosteus_oculatus
ENSORLG00020010313	parn	88	70.978	ENSLAFG00000015036	PARN	95	70.978	Loxodonta_africana
ENSORLG00020010313	parn	88	67.705	ENSMFAG00000044852	PARN	93	79.661	Macaca_fascicularis
ENSORLG00020010313	parn	88	71.148	ENSMMUG00000018849	PARN	93	79.661	Macaca_mulatta
ENSORLG00020010313	parn	88	71.148	ENSMNEG00000045108	PARN	93	79.661	Macaca_nemestrina
ENSORLG00020010313	parn	88	70.984	ENSMLEG00000031743	PARN	93	79.661	Mandrillus_leucophaeus
ENSORLG00020010313	parn	100	81.805	ENSMAMG00000006939	parn	100	81.514	Mastacembelus_armatus
ENSORLG00020010313	parn	100	81.618	ENSMZEG00005013590	parn	100	81.672	Maylandia_zebra
ENSORLG00020010313	parn	81	72.172	ENSMGAG00000001004	PARN	87	72.172	Meleagris_gallopavo
ENSORLG00020010313	parn	85	67.233	ENSMAUG00000008025	Parn	91	66.837	Mesocricetus_auratus
ENSORLG00020010313	parn	50	34.247	ENSMAUG00000012298	Pnldc1	68	34.247	Mesocricetus_auratus
ENSORLG00020010313	parn	88	70.820	ENSMICG00000016053	PARN	93	77.966	Microcebus_murinus
ENSORLG00020010313	parn	74	77.935	ENSMOCG00000022211	Parn	100	77.935	Microtus_ochrogaster
ENSORLG00020010313	parn	82	85.353	ENSMMOG00000011333	parn	90	85.353	Mola_mola
ENSORLG00020010313	parn	74	79.477	ENSMODG00000004915	PARN	99	79.477	Monodelphis_domestica
ENSORLG00020010313	parn	96	82.344	ENSMALG00000019426	parn	94	88.267	Monopterus_albus
ENSORLG00020010313	parn	88	69.435	MGP_CAROLIEiJ_G0020466	Parn	95	69.435	Mus_caroli
ENSORLG00020010313	parn	88	68.977	ENSMUSG00000022685	Parn	100	76.829	Mus_musculus
ENSORLG00020010313	parn	100	63.881	MGP_PahariEiJ_G0016172	Parn	95	69.269	Mus_pahari
ENSORLG00020010313	parn	85	71.601	MGP_SPRETEiJ_G0021361	Parn	91	71.601	Mus_spretus
ENSORLG00020010313	parn	85	72.945	ENSMPUG00000014464	PARN	91	72.945	Mustela_putorius_furo
ENSORLG00020010313	parn	74	76.970	ENSMLUG00000005414	PARN	100	76.970	Myotis_lucifugus
ENSORLG00020010313	parn	82	85.326	ENSNBRG00000006805	parn	93	85.507	Neolamprologus_brichardi
ENSORLG00020010313	parn	88	71.475	ENSNLEG00000010241	PARN	93	79.661	Nomascus_leucogenys
ENSORLG00020010313	parn	79	55.114	ENSMEUG00000008178	-	83	55.114	Notamacropus_eugenii
ENSORLG00020010313	parn	84	68.815	ENSOPRG00000012187	PARN	91	68.815	Ochotona_princeps
ENSORLG00020010313	parn	85	68.007	ENSODEG00000001617	PARN	94	65.829	Octodon_degus
ENSORLG00020010313	parn	100	82.551	ENSONIG00000000151	parn	100	82.551	Oreochromis_niloticus
ENSORLG00020010313	parn	88	70.413	ENSOCUG00000000322	PARN	94	70.413	Oryctolagus_cuniculus
ENSORLG00020010313	parn	100	99.402	ENSORLG00015000300	parn	100	99.402	Oryzias_latipes_hsok
ENSORLG00020010313	parn	100	95.089	ENSOMEG00000019555	parn	100	95.089	Oryzias_melastigma
ENSORLG00020010313	parn	74	77.016	ENSOGAG00000014626	PARN	100	77.016	Otolemur_garnettii
ENSORLG00020010313	parn	74	78.788	ENSOARG00000007574	PARN	100	78.788	Ovis_aries
ENSORLG00020010313	parn	88	70.820	ENSPPAG00000031438	PARN	93	79.661	Pan_paniscus
ENSORLG00020010313	parn	85	72.712	ENSPPRG00000018583	PARN	86	77.966	Panthera_pardus
ENSORLG00020010313	parn	85	72.712	ENSPTIG00000012135	PARN	86	77.966	Panthera_tigris_altaica
ENSORLG00020010313	parn	88	70.820	ENSPTRG00000007792	PARN	93	79.661	Pan_troglodytes
ENSORLG00020010313	parn	88	69.016	ENSPANG00000020099	PARN	93	79.661	Papio_anubis
ENSORLG00020010313	parn	99	69.044	ENSPKIG00000022807	parn	92	73.469	Paramormyrops_kingsleyae
ENSORLG00020010313	parn	93	67.661	ENSPSIG00000014804	PARN	93	71.000	Pelodiscus_sinensis
ENSORLG00020010313	parn	88	78.283	ENSPMGG00000014431	parn	82	78.283	Periophthalmus_magnuspinnatus
ENSORLG00020010313	parn	85	71.007	ENSPEMG00000018439	Parn	91	71.007	Peromyscus_maniculatus_bairdii
ENSORLG00020010313	parn	80	67.532	ENSPMAG00000003956	parn	99	67.532	Petromyzon_marinus
ENSORLG00020010313	parn	63	71.226	ENSPCIG00000001259	PARN	91	79.661	Phascolarctos_cinereus
ENSORLG00020010313	parn	100	82.018	ENSPFOG00000012823	parn	100	81.871	Poecilia_formosa
ENSORLG00020010313	parn	100	82.018	ENSPLAG00000006395	parn	100	81.579	Poecilia_latipinna
ENSORLG00020010313	parn	100	82.164	ENSPMEG00000007711	parn	100	82.018	Poecilia_mexicana
ENSORLG00020010313	parn	100	82.164	ENSPREG00000000147	parn	100	81.725	Poecilia_reticulata
ENSORLG00020010313	parn	88	70.261	ENSPPYG00000007123	PARN	95	70.261	Pongo_abelii
ENSORLG00020010313	parn	84	62.045	ENSPCAG00000001741	PARN	95	62.045	Procavia_capensis
ENSORLG00020010313	parn	88	67.541	ENSPCOG00000019292	PARN	93	77.966	Propithecus_coquereli
ENSORLG00020010313	parn	79	74.291	ENSPVAG00000002547	PARN	83	74.291	Pteropus_vampyrus
ENSORLG00020010313	parn	100	82.206	ENSPNYG00000006835	parn	100	82.206	Pundamilia_nyererei
ENSORLG00020010313	parn	93	69.231	ENSPNAG00000018905	parn	100	69.231	Pygocentrus_nattereri
ENSORLG00020010313	parn	85	71.773	ENSRNOG00000002912	Parn	96	79.592	Rattus_norvegicus
ENSORLG00020010313	parn	86	71.017	ENSSBOG00000034726	PARN	88	79.661	Saimiri_boliviensis_boliviensis
ENSORLG00020010313	parn	62	78.043	ENSSHAG00000008493	PARN	94	78.043	Sarcophilus_harrisii
ENSORLG00020010313	parn	100	69.828	ENSSFOG00015014165	parn	98	74.290	Scleropages_formosus
ENSORLG00020010313	parn	100	78.541	ENSSMAG00000000685	parn	100	78.367	Scophthalmus_maximus
ENSORLG00020010313	parn	100	81.924	ENSSDUG00000014555	parn	100	82.070	Seriola_dumerili
ENSORLG00020010313	parn	65	78.621	ENSSARG00000014339	PARN	75	78.621	Sorex_araneus
ENSORLG00020010313	parn	87	70.805	ENSSPUG00000007719	PARN	95	70.000	Sphenodon_punctatus
ENSORLG00020010313	parn	100	83.333	ENSSPAG00000007095	parn	100	83.041	Stegastes_partitus
ENSORLG00020010313	parn	85	73.116	ENSSSCG00000007878	PARN	81	73.116	Sus_scrofa
ENSORLG00020010313	parn	88	70.667	ENSTGUG00000004971	PARN	94	70.715	Taeniopygia_guttata
ENSORLG00020010313	parn	100	75.074	ENSTNIG00000008252	parn	100	75.074	Tetraodon_nigroviridis
ENSORLG00020010313	parn	80	59.636	ENSTBEG00000010407	PARN	94	59.636	Tupaia_belangeri
ENSORLG00020010313	parn	72	78.234	ENSTTRG00000002843	PARN	77	78.234	Tursiops_truncatus
ENSORLG00020010313	parn	67	67.406	ENSUAMG00000008283	PARN	94	65.217	Ursus_americanus
ENSORLG00020010313	parn	100	64.493	ENSUMAG00000004527	PARN	83	77.239	Ursus_maritimus
ENSORLG00020010313	parn	87	67.496	ENSVPAG00000008968	PARN	97	67.496	Vicugna_pacos
ENSORLG00020010313	parn	96	67.130	ENSVVUG00000019509	PARN	90	72.712	Vulpes_vulpes
ENSORLG00020010313	parn	100	61.974	ENSXETG00000010994	parn	100	73.585	Xenopus_tropicalis
ENSORLG00020010313	parn	88	81.282	ENSXCOG00000015990	parn	99	81.282	Xiphophorus_couchianus
ENSORLG00020010313	parn	100	82.456	ENSXMAG00000014783	parn	100	82.310	Xiphophorus_maculatus