EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020010382 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3253 bases
Position: chr8:16536867-16540119
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020009486	PseudoU_synth_2	PF00849.22	1.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020015887	-	2367	-	ENSORLP00020009486	304 (aa)	-	-

Gene Model

Click here to download ENSORLG00020010382's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020010382's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020010382	rpusd1	99	57.468	ENSG00000007376	RPUSD1	99	69.461	Homo_sapiens
ENSORLG00020010382	rpusd1	100	75.570	ENSAPOG00000022221	rpusd1	100	76.299	Acanthochromis_polyacanthus
ENSORLG00020010382	rpusd1	99	59.406	ENSAMEG00000007461	RPUSD1	99	59.406	Ailuropoda_melanoleuca
ENSORLG00020010382	rpusd1	99	76.603	ENSACIG00000015863	rpusd1	100	79.032	Amphilophus_citrinellus
ENSORLG00020010382	rpusd1	100	74.516	ENSAOCG00000021975	rpusd1	97	76.129	Amphiprion_ocellaris
ENSORLG00020010382	rpusd1	100	74.839	ENSAPEG00000001316	rpusd1	97	76.452	Amphiprion_percula
ENSORLG00020010382	rpusd1	100	76.774	ENSATEG00000002984	rpusd1	100	78.065	Anabas_testudineus
ENSORLG00020010382	rpusd1	77	59.414	ENSAPLG00000012316	RPUSD1	98	59.414	Anas_platyrhynchos
ENSORLG00020010382	rpusd1	98	62.752	ENSACAG00000008953	RPUSD1	99	62.752	Anolis_carolinensis
ENSORLG00020010382	rpusd1	99	56.818	ENSANAG00000024709	RPUSD1	99	56.818	Aotus_nancymaae
ENSORLG00020010382	rpusd1	99	77.170	ENSACLG00000013692	rpusd1	100	77.170	Astatotilapia_calliptera
ENSORLG00020010382	rpusd1	99	69.333	ENSAMXG00000019802	rpusd1	99	69.333	Astyanax_mexicanus
ENSORLG00020010382	rpusd1	99	60.197	ENSBTAG00000000179	RPUSD1	99	60.197	Bos_taurus
ENSORLG00020010382	rpusd1	99	56.494	ENSCJAG00000012253	RPUSD1	99	56.151	Callithrix_jacchus
ENSORLG00020010382	rpusd1	99	57.947	ENSCAFG00000019614	RPUSD1	99	58.278	Canis_familiaris
ENSORLG00020010382	rpusd1	99	57.947	ENSCAFG00020008891	RPUSD1	99	58.278	Canis_lupus_dingo
ENSORLG00020010382	rpusd1	99	60.518	ENSCHIG00000012872	RPUSD1	99	60.518	Capra_hircus
ENSORLG00020010382	rpusd1	99	57.616	ENSTSYG00000036934	RPUSD1	91	68.067	Carlito_syrichta
ENSORLG00020010382	rpusd1	99	57.616	ENSCAPG00000014219	RPUSD1	99	57.616	Cavia_aperea
ENSORLG00020010382	rpusd1	99	57.616	ENSCPOG00000034604	RPUSD1	99	57.616	Cavia_porcellus
ENSORLG00020010382	rpusd1	99	57.143	ENSCCAG00000034385	RPUSD1	99	57.143	Cebus_capucinus
ENSORLG00020010382	rpusd1	99	57.143	ENSCATG00000042983	RPUSD1	88	68.696	Cercocebus_atys
ENSORLG00020010382	rpusd1	99	56.954	ENSCLAG00000013966	RPUSD1	99	56.954	Chinchilla_lanigera
ENSORLG00020010382	rpusd1	99	56.818	ENSCSAG00000012121	RPUSD1	99	56.818	Chlorocebus_sabaeus
ENSORLG00020010382	rpusd1	98	61.130	ENSCPBG00000021101	RPUSD1	99	61.130	Chrysemys_picta_bellii
ENSORLG00020010382	rpusd1	87	62.264	ENSCANG00000028576	RPUSD1	88	68.696	Colobus_angolensis_palliatus
ENSORLG00020010382	rpusd1	99	57.616	ENSCGRG00001014253	Rpusd1	99	57.616	Cricetulus_griseus_chok1gshd
ENSORLG00020010382	rpusd1	99	57.616	ENSCGRG00000017995	Rpusd1	99	57.616	Cricetulus_griseus_crigri
ENSORLG00020010382	rpusd1	99	76.333	ENSCSEG00000018512	rpusd1	99	76.333	Cynoglossus_semilaevis
ENSORLG00020010382	rpusd1	99	78.618	ENSCVAG00000022746	rpusd1	100	78.618	Cyprinodon_variegatus
ENSORLG00020010382	rpusd1	99	68.333	ENSDARG00000060192	rpusd1	99	68.333	Danio_rerio
ENSORLG00020010382	rpusd1	99	56.579	ENSDNOG00000003721	RPUSD1	99	56.579	Dasypus_novemcinctus
ENSORLG00020010382	rpusd1	99	58.278	ENSDORG00000026656	Rpusd1	99	58.278	Dipodomys_ordii
ENSORLG00020010382	rpusd1	97	47.419	ENSEBUG00000008767	rpusd1	93	47.419	Eptatretus_burgeri
ENSORLG00020010382	rpusd1	99	57.051	ENSEASG00005018421	RPUSD1	75	57.051	Equus_asinus_asinus
ENSORLG00020010382	rpusd1	99	69.180	ENSELUG00000014307	rpusd1	89	69.180	Esox_lucius
ENSORLG00020010382	rpusd1	99	57.756	ENSFCAG00000010359	RPUSD1	99	57.756	Felis_catus
ENSORLG00020010382	rpusd1	99	63.667	ENSFALG00000003211	RPUSD1	99	63.667	Ficedula_albicollis
ENSORLG00020010382	rpusd1	99	57.655	ENSFDAG00000013398	RPUSD1	99	57.655	Fukomys_damarensis
ENSORLG00020010382	rpusd1	99	75.244	ENSFHEG00000004736	rpusd1	100	76.547	Fundulus_heteroclitus
ENSORLG00020010382	rpusd1	99	71.148	ENSGMOG00000010756	rpusd1	99	71.429	Gadus_morhua
ENSORLG00020010382	rpusd1	99	63.816	ENSGALG00000005315	RPUSD1	99	63.816	Gallus_gallus
ENSORLG00020010382	rpusd1	99	77.377	ENSGAFG00000009886	rpusd1	100	77.377	Gambusia_affinis
ENSORLG00020010382	rpusd1	99	74.757	ENSGACG00000014276	rpusd1	100	75.728	Gasterosteus_aculeatus
ENSORLG00020010382	rpusd1	98	60.596	ENSGAGG00000004181	RPUSD1	99	60.596	Gopherus_agassizii
ENSORLG00020010382	rpusd1	99	58.117	ENSGGOG00000013997	RPUSD1	88	69.565	Gorilla_gorilla
ENSORLG00020010382	rpusd1	99	77.492	ENSHBUG00000023728	rpusd1	100	77.492	Haplochromis_burtoni
ENSORLG00020010382	rpusd1	99	56.954	ENSHGLG00000002595	RPUSD1	99	56.678	Heterocephalus_glaber_female
ENSORLG00020010382	rpusd1	99	56.954	ENSHGLG00100014303	RPUSD1	99	56.678	Heterocephalus_glaber_male
ENSORLG00020010382	rpusd1	99	70.820	ENSHCOG00000002390	rpusd1	99	71.812	Hippocampus_comes
ENSORLG00020010382	rpusd1	98	68.212	ENSIPUG00000001570	rpusd1	99	68.317	Ictalurus_punctatus
ENSORLG00020010382	rpusd1	99	58.278	ENSSTOG00000004276	RPUSD1	99	58.278	Ictidomys_tridecemlineatus
ENSORLG00020010382	rpusd1	99	57.616	ENSJJAG00000015696	Rpusd1	99	57.616	Jaculus_jaculus
ENSORLG00020010382	rpusd1	100	78.361	ENSKMAG00000017287	rpusd1	100	78.431	Kryptolebias_marmoratus
ENSORLG00020010382	rpusd1	100	75.806	ENSLBEG00000022502	rpusd1	100	76.452	Labrus_bergylta
ENSORLG00020010382	rpusd1	100	75.806	ENSLBEG00000013354	RPUSD1	100	76.452	Labrus_bergylta
ENSORLG00020010382	rpusd1	99	62.295	ENSLACG00000008869	RPUSD1	99	62.295	Latimeria_chalumnae
ENSORLG00020010382	rpusd1	70	78.037	ENSLOCG00000005682	rpusd1	99	78.037	Lepisosteus_oculatus
ENSORLG00020010382	rpusd1	99	56.623	ENSLAFG00000002115	RPUSD1	99	56.623	Loxodonta_africana
ENSORLG00020010382	rpusd1	99	57.143	ENSMFAG00000003961	RPUSD1	88	68.696	Macaca_fascicularis
ENSORLG00020010382	rpusd1	99	57.143	ENSMMUG00000000842	RPUSD1	88	68.696	Macaca_mulatta
ENSORLG00020010382	rpusd1	99	57.143	ENSMNEG00000042712	RPUSD1	88	68.696	Macaca_nemestrina
ENSORLG00020010382	rpusd1	99	57.143	ENSMLEG00000030591	RPUSD1	88	68.696	Mandrillus_leucophaeus
ENSORLG00020010382	rpusd1	100	77.814	ENSMAMG00000004735	rpusd1	100	78.457	Mastacembelus_armatus
ENSORLG00020010382	rpusd1	99	77.170	ENSMZEG00005003214	rpusd1	100	77.170	Maylandia_zebra
ENSORLG00020010382	rpusd1	97	64.094	ENSMGAG00000005447	RPUSD1	99	64.094	Meleagris_gallopavo
ENSORLG00020010382	rpusd1	83	56.917	ENSMAUG00000019998	Rpusd1	96	56.917	Mesocricetus_auratus
ENSORLG00020010382	rpusd1	99	57.756	ENSMICG00000017561	RPUSD1	99	58.086	Microcebus_murinus
ENSORLG00020010382	rpusd1	99	58.278	ENSMOCG00000014082	Rpusd1	99	58.278	Microtus_ochrogaster
ENSORLG00020010382	rpusd1	99	71.711	ENSMMOG00000012569	rpusd1	99	72.368	Mola_mola
ENSORLG00020010382	rpusd1	99	62.500	ENSMODG00000016882	RPUSD1	99	62.500	Monodelphis_domestica
ENSORLG00020010382	rpusd1	100	76.527	ENSMALG00000017818	rpusd1	100	76.527	Monopterus_albus
ENSORLG00020010382	rpusd1	99	57.285	MGP_CAROLIEiJ_G0021244	Rpusd1	99	57.285	Mus_caroli
ENSORLG00020010382	rpusd1	99	57.947	ENSMUSG00000041199	Rpusd1	99	57.947	Mus_musculus
ENSORLG00020010382	rpusd1	99	57.237	MGP_PahariEiJ_G0023562	Rpusd1	99	57.237	Mus_pahari
ENSORLG00020010382	rpusd1	99	57.947	MGP_SPRETEiJ_G0022155	Rpusd1	99	57.947	Mus_spretus
ENSORLG00020010382	rpusd1	97	56.902	ENSMPUG00000015897	RPUSD1	97	58.054	Mustela_putorius_furo
ENSORLG00020010382	rpusd1	99	57.329	ENSMLUG00000001089	RPUSD1	99	56.913	Myotis_lucifugus
ENSORLG00020010382	rpusd1	99	57.285	ENSNGAG00000003595	Rpusd1	99	57.285	Nannospalax_galili
ENSORLG00020010382	rpusd1	99	77.451	ENSNBRG00000006457	rpusd1	100	77.451	Neolamprologus_brichardi
ENSORLG00020010382	rpusd1	54	48.256	ENSNLEG00000008424	-	98	48.256	Nomascus_leucogenys
ENSORLG00020010382	rpusd1	99	62.333	ENSMEUG00000016049	RPUSD1	99	62.333	Notamacropus_eugenii
ENSORLG00020010382	rpusd1	99	51.987	ENSOPRG00000008340	RPUSD1	99	51.987	Ochotona_princeps
ENSORLG00020010382	rpusd1	99	56.352	ENSODEG00000016945	RPUSD1	99	56.352	Octodon_degus
ENSORLG00020010382	rpusd1	99	77.597	ENSONIG00000015672	rpusd1	100	77.597	Oreochromis_niloticus
ENSORLG00020010382	rpusd1	100	98.355	ENSORLG00000013009	rpusd1	100	98.355	Oryzias_latipes
ENSORLG00020010382	rpusd1	100	98.026	ENSORLG00015021354	rpusd1	100	98.026	Oryzias_latipes_hsok
ENSORLG00020010382	rpusd1	100	88.816	ENSOMEG00000021426	rpusd1	100	88.816	Oryzias_melastigma
ENSORLG00020010382	rpusd1	99	56.818	ENSOGAG00000003795	RPUSD1	99	56.818	Otolemur_garnettii
ENSORLG00020010382	rpusd1	99	60.912	ENSOARG00000014254	RPUSD1	99	60.912	Ovis_aries
ENSORLG00020010382	rpusd1	99	58.117	ENSPPAG00000034797	RPUSD1	88	69.565	Pan_paniscus
ENSORLG00020010382	rpusd1	99	57.756	ENSPPRG00000012389	RPUSD1	99	57.756	Panthera_pardus
ENSORLG00020010382	rpusd1	99	57.377	ENSPTIG00000008545	RPUSD1	92	57.377	Panthera_tigris_altaica
ENSORLG00020010382	rpusd1	99	58.117	ENSPTRG00000007565	RPUSD1	88	69.565	Pan_troglodytes
ENSORLG00020010382	rpusd1	99	57.143	ENSPANG00000024401	RPUSD1	88	68.696	Papio_anubis
ENSORLG00020010382	rpusd1	99	67.763	ENSPKIG00000018890	rpusd1	91	67.763	Paramormyrops_kingsleyae
ENSORLG00020010382	rpusd1	99	62.583	ENSPSIG00000013945	RPUSD1	99	62.583	Pelodiscus_sinensis
ENSORLG00020010382	rpusd1	99	71.096	ENSPMGG00000014950	rpusd1	99	71.096	Periophthalmus_magnuspinnatus
ENSORLG00020010382	rpusd1	99	57.616	ENSPEMG00000000497	Rpusd1	99	57.616	Peromyscus_maniculatus_bairdii
ENSORLG00020010382	rpusd1	99	51.974	ENSPMAG00000001563	rpusd1	99	53.094	Petromyzon_marinus
ENSORLG00020010382	rpusd1	99	63.725	ENSPCIG00000021216	-	93	63.725	Phascolarctos_cinereus
ENSORLG00020010382	rpusd1	99	76.898	ENSPFOG00000007946	rpusd1	100	76.898	Poecilia_formosa
ENSORLG00020010382	rpusd1	99	76.898	ENSPLAG00000011925	rpusd1	100	76.898	Poecilia_latipinna
ENSORLG00020010382	rpusd1	99	76.898	ENSPMEG00000002910	rpusd1	100	76.898	Poecilia_mexicana
ENSORLG00020010382	rpusd1	99	77.705	ENSPREG00000019851	rpusd1	100	77.705	Poecilia_reticulata
ENSORLG00020010382	rpusd1	99	44.040	ENSPCAG00000002258	RPUSD1	99	44.040	Procavia_capensis
ENSORLG00020010382	rpusd1	99	56.169	ENSPCOG00000022582	RPUSD1	99	56.169	Propithecus_coquereli
ENSORLG00020010382	rpusd1	99	53.247	ENSPVAG00000013104	RPUSD1	99	53.247	Pteropus_vampyrus
ENSORLG00020010382	rpusd1	99	77.492	ENSPNYG00000024076	rpusd1	100	77.492	Pundamilia_nyererei
ENSORLG00020010382	rpusd1	99	68.000	ENSPNAG00000013806	rpusd1	99	68.000	Pygocentrus_nattereri
ENSORLG00020010382	rpusd1	99	57.947	ENSRNOG00000023639	Rpusd1	99	57.947	Rattus_norvegicus
ENSORLG00020010382	rpusd1	99	57.792	ENSRBIG00000030238	RPUSD1	99	57.792	Rhinopithecus_bieti
ENSORLG00020010382	rpusd1	99	57.792	ENSRROG00000036663	RPUSD1	99	57.792	Rhinopithecus_roxellana
ENSORLG00020010382	rpusd1	99	58.278	ENSSBOG00000033063	RPUSD1	99	58.609	Saimiri_boliviensis_boliviensis
ENSORLG00020010382	rpusd1	99	63.000	ENSSHAG00000013500	RPUSD1	99	63.000	Sarcophilus_harrisii
ENSORLG00020010382	rpusd1	98	69.900	ENSSFOG00015014394	rpusd1	99	69.900	Scleropages_formosus
ENSORLG00020010382	rpusd1	99	77.670	ENSSMAG00000008045	rpusd1	93	77.670	Scophthalmus_maximus
ENSORLG00020010382	rpusd1	85	84.942	ENSSDUG00000001829	rpusd1	97	78.710	Seriola_dumerili
ENSORLG00020010382	rpusd1	85	84.942	ENSSLDG00000020853	rpusd1	97	78.710	Seriola_lalandi_dorsalis
ENSORLG00020010382	rpusd1	54	72.455	ENSSARG00000011187	-	100	72.455	Sorex_araneus
ENSORLG00020010382	rpusd1	62	55.026	ENSSPUG00000005119	-	99	55.026	Sphenodon_punctatus
ENSORLG00020010382	rpusd1	100	78.710	ENSSPAG00000012708	rpusd1	100	78.710	Stegastes_partitus
ENSORLG00020010382	rpusd1	99	57.792	ENSSSCG00000008000	RPUSD1	98	65.748	Sus_scrofa
ENSORLG00020010382	rpusd1	83	68.127	ENSTGUG00000015375	RPUSD1	99	68.127	Taeniopygia_guttata
ENSORLG00020010382	rpusd1	100	74.760	ENSTRUG00000003041	rpusd1	99	74.760	Takifugu_rubripes
ENSORLG00020010382	rpusd1	98	70.234	ENSTNIG00000002660	rpusd1	99	70.234	Tetraodon_nigroviridis
ENSORLG00020010382	rpusd1	99	58.117	ENSTTRG00000010167	RPUSD1	99	58.117	Tursiops_truncatus
ENSORLG00020010382	rpusd1	99	58.746	ENSUAMG00000012736	RPUSD1	99	59.076	Ursus_americanus
ENSORLG00020010382	rpusd1	99	58.746	ENSUMAG00000021174	RPUSD1	94	64.093	Ursus_maritimus
ENSORLG00020010382	rpusd1	99	58.609	ENSVVUG00000012357	RPUSD1	99	58.609	Vulpes_vulpes
ENSORLG00020010382	rpusd1	99	64.000	ENSXETG00000007184	rpusd1	99	64.000	Xenopus_tropicalis
ENSORLG00020010382	rpusd1	99	76.721	ENSXCOG00000017930	rpusd1	100	76.721	Xiphophorus_couchianus
ENSORLG00020010382	rpusd1	99	77.377	ENSXMAG00000024084	rpusd1	100	77.377	Xiphophorus_maculatus