EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020010533 (Gene tree)
Gene ID: -
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 2537 bases
Position: chr22:11346932-11349468
Accession: 101173104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020009640	PseudoU_synth_2	PF00849.22	3.3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020016076	-	1626	XM_004082271	ENSORLP00020009640	541 (aa)	XP_004082319	-

Gene Model

Click here to download ENSORLG00020010533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020010533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020010533	rpusd2	89	56.212	ENSG00000166133	RPUSD2	88	56.212	Homo_sapiens
ENSORLG00020010533	rpusd2	99	66.434	ENSAPOG00000000817	rpusd2	99	66.608	Acanthochromis_polyacanthus
ENSORLG00020010533	rpusd2	84	57.296	ENSAMEG00000016996	RPUSD2	84	57.296	Ailuropoda_melanoleuca
ENSORLG00020010533	rpusd2	88	76.458	ENSACIG00000024029	rpusd2	96	76.458	Amphilophus_citrinellus
ENSORLG00020010533	rpusd2	99	67.250	ENSAOCG00000015237	rpusd2	99	67.426	Amphiprion_ocellaris
ENSORLG00020010533	rpusd2	99	66.900	ENSAPEG00000021763	rpusd2	99	67.075	Amphiprion_percula
ENSORLG00020010533	rpusd2	99	67.059	ENSATEG00000015242	rpusd2	99	67.059	Anabas_testudineus
ENSORLG00020010533	rpusd2	77	61.827	ENSAPLG00000004723	RPUSD2	100	61.827	Anas_platyrhynchos
ENSORLG00020010533	rpusd2	80	61.074	ENSACAG00000013893	RPUSD2	95	59.442	Anolis_carolinensis
ENSORLG00020010533	rpusd2	90	56.998	ENSANAG00000009691	RPUSD2	88	56.998	Aotus_nancymaae
ENSORLG00020010533	rpusd2	99	68.118	ENSACLG00000019531	rpusd2	99	68.118	Astatotilapia_calliptera
ENSORLG00020010533	rpusd2	86	64.672	ENSAMXG00000013376	rpusd2	86	64.865	Astyanax_mexicanus
ENSORLG00020010533	rpusd2	83	59.649	ENSBTAG00000003193	RPUSD2	81	59.649	Bos_taurus
ENSORLG00020010533	rpusd2	73	35.013	WBGene00019498	K07E8.7	97	35.013	Caenorhabditis_elegans
ENSORLG00020010533	rpusd2	83	59.251	ENSCJAG00000020841	RPUSD2	82	59.251	Callithrix_jacchus
ENSORLG00020010533	rpusd2	89	56.301	ENSCAFG00000009165	RPUSD2	88	56.301	Canis_familiaris
ENSORLG00020010533	rpusd2	89	56.301	ENSCAFG00020005849	RPUSD2	88	56.301	Canis_lupus_dingo
ENSORLG00020010533	rpusd2	83	59.341	ENSCHIG00000006152	RPUSD2	97	52.737	Capra_hircus
ENSORLG00020010533	rpusd2	90	55.332	ENSTSYG00000012844	RPUSD2	87	55.332	Carlito_syrichta
ENSORLG00020010533	rpusd2	91	57.000	ENSCPOG00000013201	RPUSD2	87	57.000	Cavia_porcellus
ENSORLG00020010533	rpusd2	89	56.762	ENSCCAG00000024378	RPUSD2	87	56.762	Cebus_capucinus
ENSORLG00020010533	rpusd2	89	56.646	ENSCATG00000043734	RPUSD2	88	56.646	Cercocebus_atys
ENSORLG00020010533	rpusd2	82	59.560	ENSCLAG00000011862	RPUSD2	81	59.560	Chinchilla_lanigera
ENSORLG00020010533	rpusd2	83	59.341	ENSCSAG00000007538	RPUSD2	87	59.341	Chlorocebus_sabaeus
ENSORLG00020010533	rpusd2	62	55.587	ENSCHOG00000004834	RPUSD2	63	55.874	Choloepus_hoffmanni
ENSORLG00020010533	rpusd2	83	58.144	ENSCPBG00000013419	RPUSD2	91	58.144	Chrysemys_picta_bellii
ENSORLG00020010533	rpusd2	89	56.646	ENSCANG00000003659	RPUSD2	88	56.646	Colobus_angolensis_palliatus
ENSORLG00020010533	rpusd2	83	59.031	ENSCGRG00001009839	Rpusd2	78	59.031	Cricetulus_griseus_chok1gshd
ENSORLG00020010533	rpusd2	83	59.031	ENSCGRG00000012348	Rpusd2	80	59.031	Cricetulus_griseus_crigri
ENSORLG00020010533	rpusd2	86	69.772	ENSCSEG00000001953	rpusd2	83	69.772	Cynoglossus_semilaevis
ENSORLG00020010533	rpusd2	95	69.590	ENSCVAG00000010848	rpusd2	95	69.590	Cyprinodon_variegatus
ENSORLG00020010533	rpusd2	86	67.755	ENSDARG00000060992	rpusd2	83	67.959	Danio_rerio
ENSORLG00020010533	rpusd2	88	55.556	ENSDNOG00000047745	RPUSD2	87	55.556	Dasypus_novemcinctus
ENSORLG00020010533	rpusd2	79	59.174	ENSDORG00000009092	Rpusd2	99	59.174	Dipodomys_ordii
ENSORLG00020010533	rpusd2	88	44.172	FBgn0032256	RluA-2	87	44.172	Drosophila_melanogaster
ENSORLG00020010533	rpusd2	98	40.522	FBgn0051719	RluA-1	77	40.522	Drosophila_melanogaster
ENSORLG00020010533	rpusd2	89	56.619	ENSETEG00000008581	RPUSD2	90	56.619	Echinops_telfairi
ENSORLG00020010533	rpusd2	77	34.742	ENSEBUG00000012149	rpusd2	84	35.211	Eptatretus_burgeri
ENSORLG00020010533	rpusd2	89	56.415	ENSEASG00005016463	RPUSD2	84	56.415	Equus_asinus_asinus
ENSORLG00020010533	rpusd2	89	56.415	ENSECAG00000024178	RPUSD2	84	56.415	Equus_caballus
ENSORLG00020010533	rpusd2	90	49.194	ENSEEUG00000005132	RPUSD2	91	49.194	Erinaceus_europaeus
ENSORLG00020010533	rpusd2	86	68.930	ENSELUG00000016786	rpusd2	88	68.930	Esox_lucius
ENSORLG00020010533	rpusd2	90	56.426	ENSFCAG00000040796	RPUSD2	86	56.426	Felis_catus
ENSORLG00020010533	rpusd2	79	60.690	ENSFALG00000001122	RPUSD2	97	61.124	Ficedula_albicollis
ENSORLG00020010533	rpusd2	82	58.824	ENSFDAG00000003070	RPUSD2	87	58.824	Fukomys_damarensis
ENSORLG00020010533	rpusd2	99	66.426	ENSFHEG00000007518	rpusd2	99	66.426	Fundulus_heteroclitus
ENSORLG00020010533	rpusd2	80	70.510	ENSGMOG00000011014	rpusd2	98	69.565	Gadus_morhua
ENSORLG00020010533	rpusd2	85	58.799	ENSGALG00000041216	RPUSD2	97	58.799	Gallus_gallus
ENSORLG00020010533	rpusd2	99	67.636	ENSGAFG00000003390	rpusd2	97	67.636	Gambusia_affinis
ENSORLG00020010533	rpusd2	86	72.267	ENSGACG00000008656	rpusd2	94	72.267	Gasterosteus_aculeatus
ENSORLG00020010533	rpusd2	83	62.281	ENSGAGG00000013098	RPUSD2	88	62.281	Gopherus_agassizii
ENSORLG00020010533	rpusd2	90	54.910	ENSGGOG00000006684	RPUSD2	89	54.910	Gorilla_gorilla
ENSORLG00020010533	rpusd2	99	68.118	ENSHBUG00000023777	rpusd2	99	68.118	Haplochromis_burtoni
ENSORLG00020010533	rpusd2	82	57.965	ENSHGLG00000012765	RPUSD2	81	57.965	Heterocephalus_glaber_female
ENSORLG00020010533	rpusd2	82	57.965	ENSHGLG00100006653	RPUSD2	81	57.965	Heterocephalus_glaber_male
ENSORLG00020010533	rpusd2	99	65.482	ENSHCOG00000015587	rpusd2	99	65.482	Hippocampus_comes
ENSORLG00020010533	rpusd2	87	69.980	ENSIPUG00000021006	rpusd2	83	69.980	Ictalurus_punctatus
ENSORLG00020010533	rpusd2	90	56.275	ENSSTOG00000025619	RPUSD2	88	56.275	Ictidomys_tridecemlineatus
ENSORLG00020010533	rpusd2	80	60.183	ENSJJAG00000023160	Rpusd2	89	56.965	Jaculus_jaculus
ENSORLG00020010533	rpusd2	99	66.263	ENSKMAG00000006618	rpusd2	98	66.436	Kryptolebias_marmoratus
ENSORLG00020010533	rpusd2	94	68.704	ENSLBEG00000021571	rpusd2	94	69.316	Labrus_bergylta
ENSORLG00020010533	rpusd2	79	59.560	ENSLACG00000017338	RPUSD2	99	59.560	Latimeria_chalumnae
ENSORLG00020010533	rpusd2	89	67.343	ENSLOCG00000014755	rpusd2	99	67.343	Lepisosteus_oculatus
ENSORLG00020010533	rpusd2	83	59.471	ENSLAFG00000015588	RPUSD2	84	59.471	Loxodonta_africana
ENSORLG00020010533	rpusd2	89	56.851	ENSMFAG00000045062	RPUSD2	88	56.851	Macaca_fascicularis
ENSORLG00020010533	rpusd2	89	56.851	ENSMMUG00000001483	RPUSD2	88	56.851	Macaca_mulatta
ENSORLG00020010533	rpusd2	89	50.000	ENSMNEG00000041429	RPUSD2	88	50.000	Macaca_nemestrina
ENSORLG00020010533	rpusd2	62	57.225	ENSMLEG00000036551	RPUSD2	81	57.225	Mandrillus_leucophaeus
ENSORLG00020010533	rpusd2	94	65.954	ENSMAMG00000001077	rpusd2	92	66.132	Mastacembelus_armatus
ENSORLG00020010533	rpusd2	91	72.340	ENSMZEG00005006947	rpusd2	99	72.340	Maylandia_zebra
ENSORLG00020010533	rpusd2	83	61.947	ENSMGAG00000003058	RPUSD2	98	61.947	Meleagris_gallopavo
ENSORLG00020010533	rpusd2	85	56.904	ENSMAUG00000020467	Rpusd2	85	56.904	Mesocricetus_auratus
ENSORLG00020010533	rpusd2	89	56.879	ENSMICG00000028637	RPUSD2	87	56.879	Microcebus_murinus
ENSORLG00020010533	rpusd2	86	57.917	ENSMOCG00000020061	Rpusd2	85	57.917	Microtus_ochrogaster
ENSORLG00020010533	rpusd2	99	67.380	ENSMMOG00000012020	rpusd2	99	67.673	Mola_mola
ENSORLG00020010533	rpusd2	94	54.352	ENSMODG00000000300	RPUSD2	99	52.459	Monodelphis_domestica
ENSORLG00020010533	rpusd2	99	62.375	ENSMALG00000010024	rpusd2	99	63.378	Monopterus_albus
ENSORLG00020010533	rpusd2	89	56.379	MGP_CAROLIEiJ_G0024130	Rpusd2	83	56.379	Mus_caroli
ENSORLG00020010533	rpusd2	83	58.901	ENSMUSG00000027324	Rpusd2	80	58.901	Mus_musculus
ENSORLG00020010533	rpusd2	86	58.105	MGP_PahariEiJ_G0025573	Rpusd2	84	58.105	Mus_pahari
ENSORLG00020010533	rpusd2	83	58.901	MGP_SPRETEiJ_G0025046	Rpusd2	80	58.901	Mus_spretus
ENSORLG00020010533	rpusd2	88	56.674	ENSMPUG00000008517	RPUSD2	87	56.674	Mustela_putorius_furo
ENSORLG00020010533	rpusd2	83	59.912	ENSMLUG00000007971	RPUSD2	88	59.912	Myotis_lucifugus
ENSORLG00020010533	rpusd2	83	59.251	ENSNGAG00000014126	Rpusd2	81	59.251	Nannospalax_galili
ENSORLG00020010533	rpusd2	99	68.929	ENSNBRG00000010070	rpusd2	99	68.459	Neolamprologus_brichardi
ENSORLG00020010533	rpusd2	89	56.237	ENSNLEG00000035735	RPUSD2	88	56.237	Nomascus_leucogenys
ENSORLG00020010533	rpusd2	83	59.513	ENSMEUG00000008500	RPUSD2	85	59.513	Notamacropus_eugenii
ENSORLG00020010533	rpusd2	99	51.718	ENSOPRG00000014177	-	98	51.718	Ochotona_princeps
ENSORLG00020010533	rpusd2	82	59.161	ENSODEG00000017193	RPUSD2	83	59.161	Octodon_degus
ENSORLG00020010533	rpusd2	88	75.362	ENSONIG00000020102	rpusd2	96	75.362	Oreochromis_niloticus
ENSORLG00020010533	rpusd2	83	59.649	ENSOCUG00000015745	RPUSD2	79	59.649	Oryctolagus_cuniculus
ENSORLG00020010533	rpusd2	100	98.521	ENSORLG00000015516	rpusd2	100	98.521	Oryzias_latipes
ENSORLG00020010533	rpusd2	100	97.606	ENSORLG00015009206	rpusd2	100	97.606	Oryzias_latipes_hsok
ENSORLG00020010533	rpusd2	100	85.110	ENSOMEG00000007355	rpusd2	91	85.110	Oryzias_melastigma
ENSORLG00020010533	rpusd2	84	57.996	ENSOGAG00000004867	RPUSD2	88	57.996	Otolemur_garnettii
ENSORLG00020010533	rpusd2	95	52.996	ENSOARG00000020235	RPUSD2	97	52.996	Ovis_aries
ENSORLG00020010533	rpusd2	89	56.008	ENSPPAG00000032874	RPUSD2	88	56.008	Pan_paniscus
ENSORLG00020010533	rpusd2	88	56.379	ENSPPRG00000010446	RPUSD2	87	56.379	Panthera_pardus
ENSORLG00020010533	rpusd2	84	57.725	ENSPTIG00000013316	RPUSD2	84	57.725	Panthera_tigris_altaica
ENSORLG00020010533	rpusd2	89	56.212	ENSPTRG00000006924	RPUSD2	88	56.212	Pan_troglodytes
ENSORLG00020010533	rpusd2	89	56.851	ENSPANG00000019339	RPUSD2	88	56.851	Papio_anubis
ENSORLG00020010533	rpusd2	81	62.718	ENSPKIG00000023017	rpusd2	84	60.963	Paramormyrops_kingsleyae
ENSORLG00020010533	rpusd2	62	57.303	ENSPSIG00000012680	RPUSD2	99	57.303	Pelodiscus_sinensis
ENSORLG00020010533	rpusd2	91	68.047	ENSPMGG00000018165	rpusd2	91	68.047	Periophthalmus_magnuspinnatus
ENSORLG00020010533	rpusd2	83	59.471	ENSPEMG00000012878	Rpusd2	83	59.471	Peromyscus_maniculatus_bairdii
ENSORLG00020010533	rpusd2	96	53.659	ENSPCIG00000023199	RPUSD2	97	53.659	Phascolarctos_cinereus
ENSORLG00020010533	rpusd2	86	75.899	ENSPFOG00000006829	rpusd2	85	75.899	Poecilia_formosa
ENSORLG00020010533	rpusd2	86	75.899	ENSPLAG00000022914	rpusd2	96	75.899	Poecilia_latipinna
ENSORLG00020010533	rpusd2	99	68.000	ENSPMEG00000009835	rpusd2	96	75.899	Poecilia_mexicana
ENSORLG00020010533	rpusd2	99	68.921	ENSPREG00000016441	rpusd2	94	68.921	Poecilia_reticulata
ENSORLG00020010533	rpusd2	90	55.354	ENSPPYG00000006355	RPUSD2	89	55.354	Pongo_abelii
ENSORLG00020010533	rpusd2	89	55.123	ENSPCOG00000028019	RPUSD2	87	55.123	Propithecus_coquereli
ENSORLG00020010533	rpusd2	89	56.762	ENSPVAG00000001837	RPUSD2	87	56.762	Pteropus_vampyrus
ENSORLG00020010533	rpusd2	86	76.483	ENSPNYG00000021507	rpusd2	93	76.483	Pundamilia_nyererei
ENSORLG00020010533	rpusd2	83	58.590	ENSRNOG00000046797	Rpusd2	80	58.590	Rattus_norvegicus
ENSORLG00020010533	rpusd2	83	58.590	ENSRNOG00000010528	LOC100911166	80	58.590	Rattus_norvegicus
ENSORLG00020010533	rpusd2	89	56.851	ENSRBIG00000030813	RPUSD2	88	56.851	Rhinopithecus_bieti
ENSORLG00020010533	rpusd2	89	56.646	ENSRROG00000026664	RPUSD2	88	56.646	Rhinopithecus_roxellana
ENSORLG00020010533	rpusd2	51	46.953	YOL066C	RIB2	56	41.279	Saccharomyces_cerevisiae
ENSORLG00020010533	rpusd2	52	46.048	YDL036C	-	63	46.048	Saccharomyces_cerevisiae
ENSORLG00020010533	rpusd2	88	57.231	ENSSBOG00000035031	RPUSD2	88	56.151	Saimiri_boliviensis_boliviensis
ENSORLG00020010533	rpusd2	63	56.358	ENSSHAG00000015108	RPUSD2	91	56.358	Sarcophilus_harrisii
ENSORLG00020010533	rpusd2	81	60.700	ENSSFOG00015019057	rpusd2	84	56.545	Scleropages_formosus
ENSORLG00020010533	rpusd2	99	65.372	ENSSMAG00000000903	rpusd2	98	71.593	Scophthalmus_maximus
ENSORLG00020010533	rpusd2	99	64.298	ENSSDUG00000019139	rpusd2	99	64.463	Seriola_dumerili
ENSORLG00020010533	rpusd2	99	64.463	ENSSLDG00000005938	rpusd2	99	64.628	Seriola_lalandi_dorsalis
ENSORLG00020010533	rpusd2	89	57.464	ENSSARG00000002792	RPUSD2	88	57.464	Sorex_araneus
ENSORLG00020010533	rpusd2	83	59.315	ENSSPUG00000001206	RPUSD2	91	59.315	Sphenodon_punctatus
ENSORLG00020010533	rpusd2	99	67.544	ENSSPAG00000003578	rpusd2	99	67.544	Stegastes_partitus
ENSORLG00020010533	rpusd2	91	55.888	ENSSSCG00000036700	RPUSD2	87	55.888	Sus_scrofa
ENSORLG00020010533	rpusd2	87	68.750	ENSTRUG00000025880	rpusd2	95	69.291	Takifugu_rubripes
ENSORLG00020010533	rpusd2	86	72.917	ENSTNIG00000017329	rpusd2	95	72.917	Tetraodon_nigroviridis
ENSORLG00020010533	rpusd2	90	50.202	ENSTBEG00000007933	RPUSD2	88	50.202	Tupaia_belangeri
ENSORLG00020010533	rpusd2	99	52.844	ENSTTRG00000010585	RPUSD2	99	52.844	Tursiops_truncatus
ENSORLG00020010533	rpusd2	84	58.085	ENSUAMG00000001470	RPUSD2	90	58.085	Ursus_americanus
ENSORLG00020010533	rpusd2	84	57.940	ENSUMAG00000012487	RPUSD2	74	57.940	Ursus_maritimus
ENSORLG00020010533	rpusd2	83	59.867	ENSVPAG00000003844	RPUSD2	82	59.867	Vicugna_pacos
ENSORLG00020010533	rpusd2	89	56.301	ENSVVUG00000026590	RPUSD2	88	56.301	Vulpes_vulpes
ENSORLG00020010533	rpusd2	83	58.747	ENSXETG00000015973	rpusd2	97	58.747	Xenopus_tropicalis
ENSORLG00020010533	rpusd2	99	67.269	ENSXMAG00000021821	rpusd2	96	75.264	Xiphophorus_maculatus