EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020010779 (Gene tree)
Gene ID: -
Gene Symbol: sfswap
Alias: -
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 51378 bases
Position: chr12:16248657-16300034
Accession: 101155209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020027687	DRY_EERY	PF09750.9	4.1e-32	1	1
ENSORLP00020027687	Surp	PF01805.20	6.4e-29	1	2
ENSORLP00020027687	Surp	PF01805.20	6.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020016385	-	3652	XM_011481916	ENSORLP00020027687	943 (aa)	XP_011480218	-

Gene Model

Click here to download ENSORLG00020010779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020010779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020010779	sfswap	54	67.302	ENSG00000061936	SFSWAP	67	80.247	Homo_sapiens
ENSORLG00020010779	sfswap	82	95.652	ENSAPOG00000005784	sfswap	75	95.652	Acanthochromis_polyacanthus
ENSORLG00020010779	sfswap	71	57.438	ENSAMEG00000013818	SFSWAP	82	58.159	Ailuropoda_melanoleuca
ENSORLG00020010779	sfswap	77	80.249	ENSAOCG00000016469	sfswap	75	79.834	Amphiprion_ocellaris
ENSORLG00020010779	sfswap	77	80.525	ENSAPEG00000004965	sfswap	76	80.110	Amphiprion_percula
ENSORLG00020010779	sfswap	78	77.212	ENSATEG00000021053	sfswap	75	76.881	Anabas_testudineus
ENSORLG00020010779	sfswap	68	59.942	ENSANAG00000001518	SFSWAP	82	58.114	Aotus_nancymaae
ENSORLG00020010779	sfswap	77	79.586	ENSACLG00000020159	sfswap	79	79.724	Astatotilapia_calliptera
ENSORLG00020010779	sfswap	71	65.833	ENSAMXG00000008657	sfswap	72	66.994	Astyanax_mexicanus
ENSORLG00020010779	sfswap	86	57.655	ENSBTAG00000000439	SFSWAP	82	57.618	Bos_taurus
ENSORLG00020010779	sfswap	97	50.259	ENSCJAG00000003613	SFSWAP	76	58.333	Callithrix_jacchus
ENSORLG00020010779	sfswap	69	60.000	ENSCAFG00000006625	SFSWAP	80	59.825	Canis_familiaris
ENSORLG00020010779	sfswap	76	54.974	ENSCAFG00020011254	SFSWAP	66	55.495	Canis_lupus_dingo
ENSORLG00020010779	sfswap	50	67.480	ENSCHIG00000008838	SFSWAP	82	57.559	Capra_hircus
ENSORLG00020010779	sfswap	53	66.577	ENSCCAG00000037255	SFSWAP	80	59.137	Cebus_capucinus
ENSORLG00020010779	sfswap	69	55.492	ENSCATG00000031094	SFSWAP	82	57.341	Cercocebus_atys
ENSORLG00020010779	sfswap	78	60.317	ENSCHOG00000003578	SFSWAP	73	71.186	Choloepus_hoffmanni
ENSORLG00020010779	sfswap	97	52.192	ENSCPBG00000024757	SFSWAP	80	58.924	Chrysemys_picta_bellii
ENSORLG00020010779	sfswap	89	66.577	ENSCANG00000036501	SFSWAP	81	58.416	Colobus_angolensis_palliatus
ENSORLG00020010779	sfswap	55	66.033	ENSCGRG00001011284	Sfswap	75	57.531	Cricetulus_griseus_chok1gshd
ENSORLG00020010779	sfswap	55	66.033	ENSCGRG00000017417	Sfswap	75	57.531	Cricetulus_griseus_crigri
ENSORLG00020010779	sfswap	78	74.035	ENSCSEG00000003773	sfswap	76	74.390	Cynoglossus_semilaevis
ENSORLG00020010779	sfswap	71	67.273	ENSDARG00000005980	sfswap	73	68.839	Danio_rerio
ENSORLG00020010779	sfswap	97	49.756	ENSDNOG00000018742	SFSWAP	80	60.317	Dasypus_novemcinctus
ENSORLG00020010779	sfswap	61	57.588	ENSDORG00000010352	Sfswap	70	52.984	Dipodomys_ordii
ENSORLG00020010779	sfswap	68	100.000	ENSETEG00000016657	-	67	100.000	Echinops_telfairi
ENSORLG00020010779	sfswap	84	33.900	ENSEBUG00000016748	SFSWAP	73	37.316	Eptatretus_burgeri
ENSORLG00020010779	sfswap	86	59.803	ENSEASG00005016502	SFSWAP	82	58.889	Equus_asinus_asinus
ENSORLG00020010779	sfswap	86	59.803	ENSECAG00000007657	SFSWAP	82	58.889	Equus_caballus
ENSORLG00020010779	sfswap	84	49.194	ENSEEUG00000001713	SFSWAP	63	63.473	Erinaceus_europaeus
ENSORLG00020010779	sfswap	71	67.804	ENSELUG00000010942	sfswap	94	63.811	Esox_lucius
ENSORLG00020010779	sfswap	97	53.429	ENSFCAG00000010778	SFSWAP	70	59.738	Felis_catus
ENSORLG00020010779	sfswap	68	61.638	ENSFALG00000009577	SFSWAP	75	58.433	Ficedula_albicollis
ENSORLG00020010779	sfswap	100	75.105	ENSGAFG00000006272	sfswap	79	77.473	Gambusia_affinis
ENSORLG00020010779	sfswap	70	67.806	ENSGACG00000017647	sfswap	85	65.094	Gasterosteus_aculeatus
ENSORLG00020010779	sfswap	97	52.020	ENSGAGG00000002611	SFSWAP	80	58.840	Gopherus_agassizii
ENSORLG00020010779	sfswap	50	67.302	ENSGGOG00000014877	SFSWAP	81	58.748	Gorilla_gorilla
ENSORLG00020010779	sfswap	77	79.063	ENSHBUG00000005629	sfswap	74	79.201	Haplochromis_burtoni
ENSORLG00020010779	sfswap	100	69.602	ENSHCOG00000009475	sfswap	77	72.207	Hippocampus_comes
ENSORLG00020010779	sfswap	99	58.998	ENSIPUG00000010598	sfswap	78	68.750	Ictalurus_punctatus
ENSORLG00020010779	sfswap	77	77.304	ENSKMAG00000013168	sfswap	75	77.641	Kryptolebias_marmoratus
ENSORLG00020010779	sfswap	75	77.669	ENSLBEG00000010239	sfswap	78	77.669	Labrus_bergylta
ENSORLG00020010779	sfswap	71	55.899	ENSLACG00000018678	SFSWAP	71	56.863	Latimeria_chalumnae
ENSORLG00020010779	sfswap	95	51.399	ENSMFAG00000037352	SFSWAP	81	58.133	Macaca_fascicularis
ENSORLG00020010779	sfswap	97	52.648	ENSMMUG00000020343	SFSWAP	71	58.133	Macaca_mulatta
ENSORLG00020010779	sfswap	97	52.648	ENSMNEG00000041002	SFSWAP	81	58.133	Macaca_nemestrina
ENSORLG00020010779	sfswap	54	62.500	ENSMLEG00000035728	SFSWAP	82	55.633	Mandrillus_leucophaeus
ENSORLG00020010779	sfswap	75	78.472	ENSMAMG00000006631	sfswap	76	78.194	Mastacembelus_armatus
ENSORLG00020010779	sfswap	77	79.586	ENSMZEG00005017834	SFSWAP	75	79.724	Maylandia_zebra
ENSORLG00020010779	sfswap	53	67.486	ENSMICG00000004465	SFSWAP	80	59.534	Microcebus_murinus
ENSORLG00020010779	sfswap	77	67.024	ENSMOCG00000014390	Sfswap	70	59.885	Microtus_ochrogaster
ENSORLG00020010779	sfswap	57	61.774	ENSMODG00000015581	SFSWAP	68	53.201	Monodelphis_domestica
ENSORLG00020010779	sfswap	88	66.667	MGP_PahariEiJ_G0024360	Sfswap	67	77.778	Mus_pahari
ENSORLG00020010779	sfswap	71	59.275	ENSMPUG00000002218	SFSWAP	73	58.939	Mustela_putorius_furo
ENSORLG00020010779	sfswap	68	59.629	ENSMLUG00000011296	SFSWAP	74	60.286	Myotis_lucifugus
ENSORLG00020010779	sfswap	71	77.429	ENSNBRG00000020857	sfswap	73	78.012	Neolamprologus_brichardi
ENSORLG00020010779	sfswap	69	57.790	ENSNLEG00000008386	SFSWAP	80	59.007	Nomascus_leucogenys
ENSORLG00020010779	sfswap	70	65.014	ENSOPRG00000006983	-	75	60.241	Ochotona_princeps
ENSORLG00020010779	sfswap	88	70.788	ENSONIG00000003757	sfswap	88	72.222	Oreochromis_niloticus
ENSORLG00020010779	sfswap	60	67.391	ENSOCUG00000002165	SFSWAP	70	59.420	Oryctolagus_cuniculus
ENSORLG00020010779	sfswap	100	98.621	ENSORLG00000010983	sfswap	100	98.621	Oryzias_latipes
ENSORLG00020010779	sfswap	100	97.775	ENSORLG00015023093	sfswap	100	97.775	Oryzias_latipes_hsok
ENSORLG00020010779	sfswap	76	92.361	ENSOMEG00000022065	sfswap	100	91.516	Oryzias_melastigma
ENSORLG00020010779	sfswap	62	67.209	ENSOARG00000014314	SFSWAP	83	57.559	Ovis_aries
ENSORLG00020010779	sfswap	54	67.302	ENSPPAG00000036706	SFSWAP	81	58.748	Pan_paniscus
ENSORLG00020010779	sfswap	97	50.537	ENSPPRG00000017318	SFSWAP	80	58.978	Panthera_pardus
ENSORLG00020010779	sfswap	96	48.798	ENSPTIG00000004304	SFSWAP	68	66.120	Panthera_tigris_altaica
ENSORLG00020010779	sfswap	89	67.302	ENSPTRG00000005640	SFSWAP	85	58.748	Pan_troglodytes
ENSORLG00020010779	sfswap	69	55.492	ENSPANG00000019737	SFSWAP	82	57.341	Papio_anubis
ENSORLG00020010779	sfswap	85	63.115	ENSPKIG00000008327	sfswap	76	63.179	Paramormyrops_kingsleyae
ENSORLG00020010779	sfswap	60	68.278	ENSPCIG00000006062	SFSWAP	69	56.633	Phascolarctos_cinereus
ENSORLG00020010779	sfswap	100	75.316	ENSPFOG00000019657	sfswap	77	78.177	Poecilia_formosa
ENSORLG00020010779	sfswap	100	75.211	ENSPLAG00000008513	sfswap	77	78.177	Poecilia_latipinna
ENSORLG00020010779	sfswap	77	78.326	ENSPMEG00000008716	sfswap	78	78.052	Poecilia_mexicana
ENSORLG00020010779	sfswap	100	75.315	ENSPREG00000006692	sfswap	77	77.641	Poecilia_reticulata
ENSORLG00020010779	sfswap	52	57.831	ENSPCAG00000004977	-	57	60.200	Procavia_capensis
ENSORLG00020010779	sfswap	54	67.030	ENSPCOG00000023786	SFSWAP	82	57.799	Propithecus_coquereli
ENSORLG00020010779	sfswap	71	65.000	ENSPNAG00000007073	sfswap	73	67.090	Pygocentrus_nattereri
ENSORLG00020010779	sfswap	88	66.667	ENSRNOG00000000931	Sfswap	98	47.561	Rattus_norvegicus
ENSORLG00020010779	sfswap	61	66.307	ENSRBIG00000036330	SFSWAP	69	57.571	Rhinopithecus_bieti
ENSORLG00020010779	sfswap	62	66.577	ENSSBOG00000026217	SFSWAP	83	57.083	Saimiri_boliviensis_boliviensis
ENSORLG00020010779	sfswap	65	57.143	ENSSHAG00000014232	SFSWAP	73	58.195	Sarcophilus_harrisii
ENSORLG00020010779	sfswap	67	66.616	ENSSFOG00015000766	sfswap	70	66.161	Scleropages_formosus
ENSORLG00020010779	sfswap	77	77.446	ENSSMAG00000018718	sfswap	76	76.871	Scophthalmus_maximus
ENSORLG00020010779	sfswap	77	79.189	ENSSDUG00000021680	sfswap	74	79.561	Seriola_dumerili
ENSORLG00020010779	sfswap	77	79.054	ENSSLDG00000010835	sfswap	74	79.012	Seriola_lalandi_dorsalis
ENSORLG00020010779	sfswap	71	67.188	ENSSARG00000000424	SFSWAP	83	59.332	Sorex_araneus
ENSORLG00020010779	sfswap	59	53.607	ENSSPUG00000010272	SFSWAP	70	55.041	Sphenodon_punctatus
ENSORLG00020010779	sfswap	76	79.583	ENSSPAG00000014310	sfswap	77	79.367	Stegastes_partitus
ENSORLG00020010779	sfswap	69	60.311	ENSSSCG00000009744	SFSWAP	73	58.449	Sus_scrofa
ENSORLG00020010779	sfswap	84	55.241	ENSTTRG00000013478	SFSWAP	77	66.209	Tursiops_truncatus
ENSORLG00020010779	sfswap	71	58.020	ENSUAMG00000016807	SFSWAP	81	59.058	Ursus_americanus
ENSORLG00020010779	sfswap	63	68.208	ENSUMAG00000002957	SFSWAP	74	67.536	Ursus_maritimus
ENSORLG00020010779	sfswap	69	60.000	ENSVVUG00000010753	SFSWAP	70	60.058	Vulpes_vulpes
ENSORLG00020010779	sfswap	83	57.384	ENSXETG00000009350	sfswap	91	57.613	Xenopus_tropicalis
ENSORLG00020010779	sfswap	77	77.992	ENSXMAG00000009020	sfswap	77	77.717	Xiphophorus_maculatus