EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020010789 (Gene tree)
Gene ID: -
Gene Symbol: nom1
Alias: -
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 17249 bases
Position: chr20:18047330-18064578
Accession: ZDB-GENE-060503-321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020027706	MA3	PF02847.17	9.2e-23	1	1
ENSORLP00020027706	MIF4G	PF02854.19	2.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020031100	-	3791	-	ENSORLP00020027706	767 (aa)	-	-

Gene Model

Click here to download ENSORLG00020010789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020010789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020010789	nom1	90	58.120	ENSG00000146909	NOM1	79	58.874	Homo_sapiens
ENSORLG00020010789	nom1	69	86.116	ENSAPOG00000012073	nom1	93	75.032	Acanthochromis_polyacanthus
ENSORLG00020010789	nom1	90	56.534	ENSAMEG00000001412	NOM1	94	56.366	Ailuropoda_melanoleuca
ENSORLG00020010789	nom1	99	71.669	ENSACIG00000018050	nom1	92	72.436	Amphilophus_citrinellus
ENSORLG00020010789	nom1	69	85.366	ENSAOCG00000006229	nom1	93	74.275	Amphiprion_ocellaris
ENSORLG00020010789	nom1	99	74.046	ENSAPEG00000015994	nom1	93	74.177	Amphiprion_percula
ENSORLG00020010789	nom1	99	72.927	ENSATEG00000005405	nom1	93	73.813	Anabas_testudineus
ENSORLG00020010789	nom1	86	59.098	ENSAPLG00000006585	NOM1	96	57.975	Anas_platyrhynchos
ENSORLG00020010789	nom1	86	56.122	ENSACAG00000011192	NOM1	84	56.485	Anolis_carolinensis
ENSORLG00020010789	nom1	99	73.846	ENSACLG00000000033	nom1	92	73.931	Astatotilapia_calliptera
ENSORLG00020010789	nom1	69	73.774	ENSAMXG00000041486	nom1	83	64.575	Astyanax_mexicanus
ENSORLG00020010789	nom1	89	55.827	ENSBTAG00000016435	NOM1	79	55.319	Bos_taurus
ENSORLG00020010789	nom1	89	57.940	ENSCJAG00000004336	NOM1	79	56.941	Callithrix_jacchus
ENSORLG00020010789	nom1	90	55.350	ENSCAFG00020005121	NOM1	79	54.820	Canis_lupus_dingo
ENSORLG00020010789	nom1	89	55.385	ENSCHIG00000020102	NOM1	62	63.962	Capra_hircus
ENSORLG00020010789	nom1	90	57.797	ENSTSYG00000000227	NOM1	79	58.213	Carlito_syrichta
ENSORLG00020010789	nom1	68	66.795	ENSCAPG00000016273	NOM1	97	67.583	Cavia_aperea
ENSORLG00020010789	nom1	89	55.572	ENSCPOG00000025538	NOM1	77	55.007	Cavia_porcellus
ENSORLG00020010789	nom1	80	66.901	ENSCCAG00000014944	NOM1	96	66.860	Cebus_capucinus
ENSORLG00020010789	nom1	89	57.475	ENSCLAG00000000267	NOM1	79	57.558	Chinchilla_lanigera
ENSORLG00020010789	nom1	79	68.061	ENSCPBG00000018215	NOM1	67	68.061	Chrysemys_picta_bellii
ENSORLG00020010789	nom1	95	36.892	ENSCING00000005248	-	92	36.850	Ciona_intestinalis
ENSORLG00020010789	nom1	68	65.589	ENSCANG00000041984	NOM1	88	66.602	Colobus_angolensis_palliatus
ENSORLG00020010789	nom1	90	57.554	ENSCGRG00001020293	Nom1	79	57.540	Cricetulus_griseus_chok1gshd
ENSORLG00020010789	nom1	68	65.143	ENSCGRG00000005405	Nom1	95	66.208	Cricetulus_griseus_crigri
ENSORLG00020010789	nom1	95	68.371	ENSCSEG00000000932	nom1	88	67.919	Cynoglossus_semilaevis
ENSORLG00020010789	nom1	100	72.624	ENSCVAG00000007562	nom1	93	72.983	Cyprinodon_variegatus
ENSORLG00020010789	nom1	99	63.974	ENSDARG00000060027	nom1	97	75.738	Danio_rerio
ENSORLG00020010789	nom1	74	58.182	ENSDORG00000015682	Nom1	97	48.915	Dipodomys_ordii
ENSORLG00020010789	nom1	64	38.614	FBgn0035336	CG9004	77	36.269	Drosophila_melanogaster
ENSORLG00020010789	nom1	80	56.635	ENSETEG00000003104	NOM1	70	57.524	Echinops_telfairi
ENSORLG00020010789	nom1	56	51.376	ENSEBUG00000010077	nom1	89	53.713	Eptatretus_burgeri
ENSORLG00020010789	nom1	90	59.254	ENSEASG00005001489	NOM1	79	59.254	Equus_asinus_asinus
ENSORLG00020010789	nom1	72	63.929	ENSECAG00000007596	NOM1	74	58.177	Equus_caballus
ENSORLG00020010789	nom1	99	66.076	ENSELUG00000006266	nom1	92	67.344	Esox_lucius
ENSORLG00020010789	nom1	90	57.287	ENSFCAG00000006467	NOM1	82	57.122	Felis_catus
ENSORLG00020010789	nom1	89	56.957	ENSFALG00000006904	NOM1	99	56.865	Ficedula_albicollis
ENSORLG00020010789	nom1	94	56.181	ENSFDAG00000016241	NOM1	81	56.815	Fukomys_damarensis
ENSORLG00020010789	nom1	100	71.871	ENSFHEG00000015974	nom1	92	72.645	Fundulus_heteroclitus
ENSORLG00020010789	nom1	94	61.957	ENSGMOG00000005129	nom1	98	61.489	Gadus_morhua
ENSORLG00020010789	nom1	88	57.602	ENSGALG00000006437	NOM1	61	65.589	Gallus_gallus
ENSORLG00020010789	nom1	100	71.301	ENSGAFG00000003211	nom1	93	70.551	Gambusia_affinis
ENSORLG00020010789	nom1	90	56.346	ENSGAGG00000014347	NOM1	84	57.241	Gopherus_agassizii
ENSORLG00020010789	nom1	90	58.646	ENSGGOG00000010920	NOM1	73	58.730	Gorilla_gorilla
ENSORLG00020010789	nom1	99	73.677	ENSHBUG00000014616	nom1	92	74.477	Haplochromis_burtoni
ENSORLG00020010789	nom1	95	55.159	ENSHGLG00000007392	NOM1	79	58.601	Heterocephalus_glaber_female
ENSORLG00020010789	nom1	95	55.159	ENSHGLG00100014407	NOM1	79	58.601	Heterocephalus_glaber_male
ENSORLG00020010789	nom1	97	61.170	ENSIPUG00000013980	nom1	83	64.225	Ictalurus_punctatus
ENSORLG00020010789	nom1	68	66.475	ENSSTOG00000031736	NOM1	89	67.451	Ictidomys_tridecemlineatus
ENSORLG00020010789	nom1	63	67.351	ENSJJAG00000011716	Nom1	96	68.134	Jaculus_jaculus
ENSORLG00020010789	nom1	100	71.606	ENSLBEG00000009252	nom1	93	72.362	Labrus_bergylta
ENSORLG00020010789	nom1	91	61.818	ENSLACG00000011777	NOM1	84	61.648	Latimeria_chalumnae
ENSORLG00020010789	nom1	99	63.494	ENSLOCG00000012452	nom1	94	62.612	Lepisosteus_oculatus
ENSORLG00020010789	nom1	99	48.780	ENSLAFG00000007119	NOM1	80	52.586	Loxodonta_africana
ENSORLG00020010789	nom1	90	54.278	ENSMMUG00000039033	NOM1	78	55.891	Macaca_mulatta
ENSORLG00020010789	nom1	68	65.970	ENSMLEG00000037062	NOM1	96	67.188	Mandrillus_leucophaeus
ENSORLG00020010789	nom1	99	72.123	ENSMAMG00000004118	nom1	93	71.954	Mastacembelus_armatus
ENSORLG00020010789	nom1	99	73.846	ENSMZEG00005000384	nom1	92	73.819	Maylandia_zebra
ENSORLG00020010789	nom1	91	57.812	ENSMGAG00000005051	NOM1	97	57.407	Meleagris_gallopavo
ENSORLG00020010789	nom1	90	57.287	ENSMAUG00000017988	Nom1	80	57.872	Mesocricetus_auratus
ENSORLG00020010789	nom1	89	56.440	ENSMICG00000017531	NOM1	80	57.536	Microcebus_murinus
ENSORLG00020010789	nom1	99	55.439	ENSMOCG00000015962	Nom1	85	54.618	Microtus_ochrogaster
ENSORLG00020010789	nom1	99	66.921	ENSMMOG00000004419	nom1	92	68.010	Mola_mola
ENSORLG00020010789	nom1	89	59.222	ENSMODG00000005177	NOM1	80	58.345	Monodelphis_domestica
ENSORLG00020010789	nom1	93	72.215	ENSMALG00000008800	nom1	92	71.623	Monopterus_albus
ENSORLG00020010789	nom1	94	55.846	MGP_CAROLIEiJ_G0027043	Nom1	78	56.295	Mus_caroli
ENSORLG00020010789	nom1	94	56.121	ENSMUSG00000001569	Nom1	78	56.729	Mus_musculus
ENSORLG00020010789	nom1	94	55.708	MGP_SPRETEiJ_G0028039	Nom1	78	56.729	Mus_spretus
ENSORLG00020010789	nom1	89	53.535	ENSMPUG00000009745	NOM1	98	54.414	Mustela_putorius_furo
ENSORLG00020010789	nom1	78	60.500	ENSMLUG00000009129	NOM1	88	64.650	Myotis_lucifugus
ENSORLG00020010789	nom1	99	74.165	ENSNBRG00000016429	nom1	95	84.688	Neolamprologus_brichardi
ENSORLG00020010789	nom1	90	57.163	ENSNLEG00000000238	NOM1	79	57.554	Nomascus_leucogenys
ENSORLG00020010789	nom1	77	55.213	ENSMEUG00000001108	NOM1	70	53.972	Notamacropus_eugenii
ENSORLG00020010789	nom1	78	48.008	ENSOPRG00000014676	NOM1	69	46.584	Ochotona_princeps
ENSORLG00020010789	nom1	89	55.983	ENSODEG00000009399	NOM1	73	65.430	Octodon_degus
ENSORLG00020010789	nom1	99	73.785	ENSONIG00000005958	nom1	98	73.597	Oreochromis_niloticus
ENSORLG00020010789	nom1	60	67.387	ENSOANG00000006139	-	97	67.826	Ornithorhynchus_anatinus
ENSORLG00020010789	nom1	100	54.534	ENSOCUG00000004071	-	79	58.526	Oryctolagus_cuniculus
ENSORLG00020010789	nom1	99	44.387	ENSOCUG00000021448	-	85	54.721	Oryctolagus_cuniculus
ENSORLG00020010789	nom1	100	98.307	ENSORLG00000010541	nom1	93	98.307	Oryzias_latipes
ENSORLG00020010789	nom1	100	98.435	ENSORLG00015010475	nom1	100	98.435	Oryzias_latipes_hsok
ENSORLG00020010789	nom1	99	87.906	ENSOMEG00000004219	nom1	93	88.273	Oryzias_melastigma
ENSORLG00020010789	nom1	76	62.351	ENSOGAG00000001124	NOM1	84	67.773	Otolemur_garnettii
ENSORLG00020010789	nom1	89	54.685	ENSOARG00000007261	NOM1	71	63.774	Ovis_aries
ENSORLG00020010789	nom1	90	57.977	ENSPPAG00000041374	NOM1	79	59.479	Pan_paniscus
ENSORLG00020010789	nom1	90	57.061	ENSPTIG00000013532	NOM1	93	56.894	Panthera_tigris_altaica
ENSORLG00020010789	nom1	90	57.977	ENSPTRG00000019917	NOM1	79	59.334	Pan_troglodytes
ENSORLG00020010789	nom1	90	58.782	ENSPANG00000007605	NOM1	79	58.730	Papio_anubis
ENSORLG00020010789	nom1	98	61.447	ENSPKIG00000005825	nom1	84	63.105	Paramormyrops_kingsleyae
ENSORLG00020010789	nom1	70	66.605	ENSPSIG00000017848	NOM1	90	66.605	Pelodiscus_sinensis
ENSORLG00020010789	nom1	99	70.795	ENSPMGG00000002577	nom1	92	70.155	Periophthalmus_magnuspinnatus
ENSORLG00020010789	nom1	90	58.537	ENSPEMG00000024180	Nom1	77	57.122	Peromyscus_maniculatus_bairdii
ENSORLG00020010789	nom1	90	57.279	ENSPCIG00000027941	NOM1	77	57.887	Phascolarctos_cinereus
ENSORLG00020010789	nom1	100	71.684	ENSPFOG00000015771	nom1	93	72.066	Poecilia_formosa
ENSORLG00020010789	nom1	70	81.903	ENSPLAG00000007856	nom1	93	70.807	Poecilia_latipinna
ENSORLG00020010789	nom1	100	71.975	ENSPMEG00000014155	nom1	93	71.611	Poecilia_mexicana
ENSORLG00020010789	nom1	100	70.218	ENSPREG00000008850	nom1	93	70.603	Poecilia_reticulata
ENSORLG00020010789	nom1	90	54.899	ENSPPYG00000018222	NOM1	78	54.834	Pongo_abelii
ENSORLG00020010789	nom1	62	64.815	ENSPCAG00000000440	NOM1	69	60.930	Procavia_capensis
ENSORLG00020010789	nom1	69	64.662	ENSPCOG00000015222	NOM1	97	65.637	Propithecus_coquereli
ENSORLG00020010789	nom1	90	55.891	ENSPVAG00000014760	NOM1	78	55.844	Pteropus_vampyrus
ENSORLG00020010789	nom1	99	74.160	ENSPNYG00000006975	nom1	96	84.023	Pundamilia_nyererei
ENSORLG00020010789	nom1	71	71.664	ENSPNAG00000011085	nom1	80	63.573	Pygocentrus_nattereri
ENSORLG00020010789	nom1	98	53.183	ENSRNOG00000048969	AABR07059041.1	82	54.862	Rattus_norvegicus
ENSORLG00020010789	nom1	90	57.932	ENSRBIG00000037042	NOM1	79	58.790	Rhinopithecus_bieti
ENSORLG00020010789	nom1	90	57.649	ENSRROG00000037293	NOM1	79	58.501	Rhinopithecus_roxellana
ENSORLG00020010789	nom1	54	61.594	ENSSHAG00000002835	-	100	61.594	Sarcophilus_harrisii
ENSORLG00020010789	nom1	72	65.295	ENSSHAG00000017998	-	98	58.739	Sarcophilus_harrisii
ENSORLG00020010789	nom1	63	71.014	ENSSFOG00015003196	nom1	99	71.014	Scleropages_formosus
ENSORLG00020010789	nom1	99	72.506	ENSSMAG00000011047	nom1	93	71.859	Scophthalmus_maximus
ENSORLG00020010789	nom1	99	70.741	ENSSDUG00000006834	nom1	93	73.004	Seriola_dumerili
ENSORLG00020010789	nom1	69	84.240	ENSSLDG00000021812	nom1	93	72.392	Seriola_lalandi_dorsalis
ENSORLG00020010789	nom1	91	48.815	ENSSPUG00000002556	NOM1	97	54.459	Sphenodon_punctatus
ENSORLG00020010789	nom1	99	74.282	ENSSPAG00000000953	nom1	93	74.378	Stegastes_partitus
ENSORLG00020010789	nom1	89	57.536	ENSTGUG00000000702	-	99	57.021	Taeniopygia_guttata
ENSORLG00020010789	nom1	99	67.658	ENSTRUG00000010239	nom1	93	66.667	Takifugu_rubripes
ENSORLG00020010789	nom1	99	67.137	ENSTNIG00000012783	nom1	98	67.730	Tetraodon_nigroviridis
ENSORLG00020010789	nom1	88	57.540	ENSTTRG00000009691	NOM1	80	56.691	Tursiops_truncatus
ENSORLG00020010789	nom1	90	56.534	ENSUAMG00000025450	NOM1	79	56.153	Ursus_americanus
ENSORLG00020010789	nom1	90	56.772	ENSUMAG00000014275	NOM1	94	56.421	Ursus_maritimus
ENSORLG00020010789	nom1	90	55.731	ENSVVUG00000002608	NOM1	77	67.464	Vulpes_vulpes
ENSORLG00020010789	nom1	98	52.411	ENSXETG00000021611	nom1	82	69.756	Xenopus_tropicalis
ENSORLG00020010789	nom1	100	71.483	ENSXMAG00000002451	nom1	92	71.483	Xiphophorus_maculatus