EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020010937 (Gene tree)
Gene ID: -
Gene Symbol: patz1
Alias: -
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 17712 bases
Position: chr5:537345-555056
Accession: ZDB-GENE-111223-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020010046	zf-C2H2	PF00096.26	1.1e-29	1	4
ENSORLP00020010046	zf-C2H2	PF00096.26	1.1e-29	2	4
ENSORLP00020010046	zf-C2H2	PF00096.26	1.1e-29	3	4
ENSORLP00020010046	zf-C2H2	PF00096.26	1.1e-29	4	4
ENSORLP00020010007	zf-C2H2	PF00096.26	1.4e-22	1	3
ENSORLP00020010007	zf-C2H2	PF00096.26	1.4e-22	2	3
ENSORLP00020010007	zf-C2H2	PF00096.26	1.4e-22	3	3
ENSORLP00020010010	zf-C2H2	PF00096.26	2.2e-22	1	3
ENSORLP00020010010	zf-C2H2	PF00096.26	2.2e-22	2	3
ENSORLP00020010010	zf-C2H2	PF00096.26	2.2e-22	3	3
ENSORLP00020010046	zf-met	PF12874.7	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020016547	-	1803	-	ENSORLP00020010007	600 (aa)	-	-
ENSORLT00020016558	-	1947	-	ENSORLP00020010010	648 (aa)	-	-
ENSORLT00020016650	-	2106	-	ENSORLP00020010046	701 (aa)	-	-

Gene Model

Click here to download ENSORLG00020010937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020010937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020010937	patz1	57	30.802	ENSORLG00020008744	-	71	32.877
ENSORLG00020010937	patz1	51	32.394	ENSORLG00020006527	hic2	50	37.500
ENSORLG00020010937	patz1	60	33.080	ENSORLG00020010950	-	96	38.182
ENSORLG00020010937	patz1	60	34.659	ENSORLG00020006144	-	90	32.258
ENSORLG00020010937	patz1	64	35.795	ENSORLG00020018069	-	88	34.419
ENSORLG00020010937	patz1	52	36.095	ENSORLG00020016037	-	94	36.095
ENSORLG00020010937	patz1	54	30.364	ENSORLG00020008933	-	76	30.415
ENSORLG00020010937	patz1	72	31.136	ENSORLG00020009419	-	92	37.615
ENSORLG00020010937	patz1	78	39.744	ENSORLG00020002765	zbtb34	87	39.744
ENSORLG00020010937	patz1	54	32.367	ENSORLG00020017483	-	92	32.218
ENSORLG00020010937	patz1	59	30.303	ENSORLG00020010804	-	94	30.698
ENSORLG00020010937	patz1	70	30.332	ENSORLG00020013114	zbtb47b	60	33.140
ENSORLG00020010937	patz1	50	36.184	ENSORLG00020003719	GFI1B	56	36.184
ENSORLG00020010937	patz1	57	36.095	ENSORLG00020000481	-	84	35.928
ENSORLG00020010937	patz1	56	32.749	ENSORLG00020011075	-	73	32.749
ENSORLG00020010937	patz1	53	36.111	ENSORLG00020001912	znf236	73	36.111
ENSORLG00020010937	patz1	51	32.911	ENSORLG00020010880	-	88	31.308
ENSORLG00020010937	patz1	68	34.337	ENSORLG00020009943	-	97	34.337
ENSORLG00020010937	patz1	53	31.163	ENSORLG00020010020	-	73	31.163
ENSORLG00020010937	patz1	61	33.103	ENSORLG00020010647	-	75	31.447
ENSORLG00020010937	patz1	51	34.000	ENSORLG00020018921	-	79	34.078
ENSORLG00020010937	patz1	56	33.133	ENSORLG00020008891	-	82	35.057
ENSORLG00020010937	patz1	52	33.529	ENSORLG00020010953	-	85	33.529
ENSORLG00020010937	patz1	70	32.086	ENSORLG00020010135	zbtb16	58	32.086
ENSORLG00020010937	patz1	56	30.417	ENSORLG00020010560	-	95	31.980
ENSORLG00020010937	patz1	65	40.952	ENSORLG00020003678	bcl6ab	50	40.952
ENSORLG00020010937	patz1	53	36.145	ENSORLG00020016666	-	71	36.145
ENSORLG00020010937	patz1	88	30.769	ENSORLG00020012229	zbtb41	80	30.769
ENSORLG00020010937	patz1	56	30.734	ENSORLG00020018685	znf319b	80	31.373
ENSORLG00020010937	patz1	53	34.025	ENSORLG00020007018	-	79	34.826
ENSORLG00020010937	patz1	54	32.547	ENSORLG00020009965	-	86	39.474
ENSORLG00020010937	patz1	53	31.818	ENSORLG00020010636	-	75	31.837
ENSORLG00020010937	patz1	50	32.245	ENSORLG00020009089	-	55	34.503
ENSORLG00020010937	patz1	57	31.111	ENSORLG00020009180	-	91	31.925
ENSORLG00020010937	patz1	50	33.987	ENSORLG00020016754	-	91	35.333
ENSORLG00020010937	patz1	58	37.349	ENSORLG00020007967	-	91	32.948
ENSORLG00020010937	patz1	50	38.889	ENSORLG00020017076	si:ch211-216l23.1	56	35.652
ENSORLG00020010937	patz1	58	30.859	ENSORLG00020010916	-	61	30.263
ENSORLG00020010937	patz1	90	36.552	ENSORLG00020007790	zbtb48	90	36.552
ENSORLG00020010937	patz1	59	31.834	ENSORLG00020015703	-	64	35.333
ENSORLG00020010937	patz1	66	35.714	ENSORLG00020017850	-	88	37.647
ENSORLG00020010937	patz1	54	33.939	ENSORLG00020014595	PRDM15	51	34.899
ENSORLG00020010937	patz1	50	33.981	ENSORLG00020017528	-	84	33.981
ENSORLG00020010937	patz1	54	30.380	ENSORLG00020000246	-	82	30.380
ENSORLG00020010937	patz1	67	32.121	ENSORLG00020002128	-	99	32.544
ENSORLG00020010937	patz1	56	32.000	ENSORLG00020010250	-	89	31.579
ENSORLG00020010937	patz1	52	30.814	ENSORLG00020008018	-	76	30.814
ENSORLG00020010937	patz1	56	30.040	ENSORLG00020020419	-	84	31.183
ENSORLG00020010937	patz1	54	34.197	ENSORLG00020009554	-	86	35.751
ENSORLG00020010937	patz1	50	38.060	ENSORLG00020007074	-	94	36.220
ENSORLG00020010937	patz1	56	32.576	ENSORLG00020018495	-	66	32.576
ENSORLG00020010937	patz1	62	32.800	ENSORLG00020009184	-	90	32.800
ENSORLG00020010937	patz1	59	36.943	ENSORLG00020000219	-	98	36.943
ENSORLG00020010937	patz1	50	31.739	ENSORLG00020005815	-	77	34.524
ENSORLG00020010937	patz1	54	31.955	ENSORLG00020008346	-	88	31.771
ENSORLG00020010937	patz1	52	30.172	ENSORLG00020011149	-	79	30.172
ENSORLG00020010937	patz1	52	38.889	ENSORLG00020005132	-	69	38.889
ENSORLG00020010937	patz1	57	33.333	ENSORLG00020011234	-	75	33.333
ENSORLG00020010937	patz1	51	30.043	ENSORLG00020008240	-	58	35.519
ENSORLG00020010937	patz1	50	32.022	ENSORLG00020000161	-	85	32.022
ENSORLG00020010937	patz1	55	31.818	ENSORLG00020018791	-	89	31.818
ENSORLG00020010937	patz1	56	33.793	ENSORLG00020010171	-	95	30.928
ENSORLG00020010937	patz1	56	30.303	ENSORLG00020010285	znf646	55	30.303
ENSORLG00020010937	patz1	61	32.917	ENSORLG00020017164	-	99	32.917
ENSORLG00020010937	patz1	51	30.040	ENSORLG00020018503	-	70	30.040
ENSORLG00020010937	patz1	55	31.837	ENSORLG00020009857	-	92	32.240
ENSORLG00020010937	patz1	59	34.091	ENSORLG00020009139	-	97	33.014
ENSORLG00020010937	patz1	52	37.324	ENSORLG00020018051	prdm5	69	37.324

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020010937	patz1	100	58.626	ENSG00000100105	PATZ1	100	58.779	Homo_sapiens
ENSORLG00020010937	patz1	100	84.708	ENSAPOG00000018447	patz1	100	84.708	Acanthochromis_polyacanthus
ENSORLG00020010937	patz1	100	56.658	ENSAMEG00000007074	PATZ1	100	56.599	Ailuropoda_melanoleuca
ENSORLG00020010937	patz1	100	78.865	ENSACIG00000016779	patz1	100	78.865	Amphilophus_citrinellus
ENSORLG00020010937	patz1	100	83.384	ENSAPEG00000013354	patz1	100	84.394	Amphiprion_percula
ENSORLG00020010937	patz1	99	85.208	ENSATEG00000011260	patz1	100	82.759	Anabas_testudineus
ENSORLG00020010937	patz1	88	55.416	ENSAPLG00000003934	PATZ1	99	55.416	Anas_platyrhynchos
ENSORLG00020010937	patz1	100	58.626	ENSANAG00000029603	PATZ1	100	58.779	Aotus_nancymaae
ENSORLG00020010937	patz1	99	69.405	ENSAMXG00000002273	patz1	100	63.728	Astyanax_mexicanus
ENSORLG00020010937	patz1	100	58.473	ENSBTAG00000005478	PATZ1	100	58.626	Bos_taurus
ENSORLG00020010937	patz1	100	58.626	ENSCJAG00000010978	PATZ1	100	58.779	Callithrix_jacchus
ENSORLG00020010937	patz1	100	58.473	ENSCAFG00000013087	PATZ1	99	58.626	Canis_familiaris
ENSORLG00020010937	patz1	100	58.473	ENSCHIG00000020203	PATZ1	100	58.626	Capra_hircus
ENSORLG00020010937	patz1	100	58.626	ENSTSYG00000033183	PATZ1	100	58.779	Carlito_syrichta
ENSORLG00020010937	patz1	100	58.626	ENSCCAG00000028772	PATZ1	100	58.779	Cebus_capucinus
ENSORLG00020010937	patz1	100	58.626	ENSCATG00000006101	PATZ1	100	58.779	Cercocebus_atys
ENSORLG00020010937	patz1	100	55.831	ENSCPBG00000011277	PATZ1	100	56.414	Chrysemys_picta_bellii
ENSORLG00020010937	patz1	100	58.626	ENSCANG00000024972	PATZ1	100	58.779	Colobus_angolensis_palliatus
ENSORLG00020010937	patz1	100	57.099	ENSCGRG00001004071	Patz1	100	57.099	Cricetulus_griseus_chok1gshd
ENSORLG00020010937	patz1	93	56.270	ENSCGRG00000004814	Patz1	100	56.956	Cricetulus_griseus_crigri
ENSORLG00020010937	patz1	100	74.576	ENSCSEG00000001385	patz1	100	74.859	Cynoglossus_semilaevis
ENSORLG00020010937	patz1	100	83.051	ENSCVAG00000007684	patz1	100	82.848	Cyprinodon_variegatus
ENSORLG00020010937	patz1	99	67.556	ENSDARG00000076584	patz1	100	65.923	Danio_rerio
ENSORLG00020010937	patz1	90	56.344	ENSDNOG00000003183	PATZ1	100	56.495	Dasypus_novemcinctus
ENSORLG00020010937	patz1	100	58.626	ENSDORG00000023834	Patz1	100	58.779	Dipodomys_ordii
ENSORLG00020010937	patz1	100	58.626	ENSECAG00000025030	PATZ1	100	58.779	Equus_caballus
ENSORLG00020010937	patz1	100	72.510	ENSELUG00000002333	patz1	100	72.510	Esox_lucius
ENSORLG00020010937	patz1	100	58.473	ENSFCAG00000030253	PATZ1	100	58.626	Felis_catus
ENSORLG00020010937	patz1	89	55.677	ENSFALG00000007450	PATZ1	100	55.677	Ficedula_albicollis
ENSORLG00020010937	patz1	97	53.173	ENSFDAG00000005614	PATZ1	100	53.738	Fukomys_damarensis
ENSORLG00020010937	patz1	100	83.461	ENSFHEG00000014755	patz1	100	83.614	Fundulus_heteroclitus
ENSORLG00020010937	patz1	100	72.379	ENSGMOG00000001062	patz1	100	72.379	Gadus_morhua
ENSORLG00020010937	patz1	100	54.813	ENSGALG00000006934	PATZ1	100	55.274	Gallus_gallus
ENSORLG00020010937	patz1	100	83.589	ENSGAFG00000010053	patz1	100	84.356	Gambusia_affinis
ENSORLG00020010937	patz1	88	55.660	ENSGAGG00000003214	PATZ1	100	56.034	Gopherus_agassizii
ENSORLG00020010937	patz1	100	58.626	ENSGGOG00000017171	PATZ1	100	58.779	Gorilla_gorilla
ENSORLG00020010937	patz1	99	78.819	ENSHCOG00000017644	patz1	93	78.254	Hippocampus_comes
ENSORLG00020010937	patz1	100	68.672	ENSIPUG00000017653	patz1	99	68.672	Ictalurus_punctatus
ENSORLG00020010937	patz1	100	58.485	ENSSTOG00000020707	PATZ1	100	58.636	Ictidomys_tridecemlineatus
ENSORLG00020010937	patz1	100	57.791	ENSJJAG00000015259	Patz1	100	58.245	Jaculus_jaculus
ENSORLG00020010937	patz1	100	78.053	ENSKMAG00000008157	patz1	100	78.704	Kryptolebias_marmoratus
ENSORLG00020010937	patz1	100	57.341	ENSLAFG00000002317	PATZ1	100	57.479	Loxodonta_africana
ENSORLG00020010937	patz1	100	58.779	ENSMFAG00000040968	PATZ1	100	59.084	Macaca_fascicularis
ENSORLG00020010937	patz1	100	58.779	ENSMNEG00000037588	PATZ1	100	59.084	Macaca_nemestrina
ENSORLG00020010937	patz1	100	58.626	ENSMLEG00000030938	PATZ1	100	58.779	Mandrillus_leucophaeus
ENSORLG00020010937	patz1	100	83.079	ENSMAMG00000023652	patz1	100	83.936	Mastacembelus_armatus
ENSORLG00020010937	patz1	89	52.194	ENSMGAG00000008439	PATZ1	100	52.194	Meleagris_gallopavo
ENSORLG00020010937	patz1	100	58.626	ENSMAUG00000004129	Patz1	100	58.626	Mesocricetus_auratus
ENSORLG00020010937	patz1	100	58.779	ENSMICG00000005430	PATZ1	100	58.931	Microcebus_murinus
ENSORLG00020010937	patz1	100	58.626	ENSMOCG00000014488	Patz1	100	58.626	Microtus_ochrogaster
ENSORLG00020010937	patz1	99	78.512	ENSMMOG00000021679	patz1	100	73.441	Mola_mola
ENSORLG00020010937	patz1	100	80.335	ENSMALG00000021172	patz1	100	80.335	Monopterus_albus
ENSORLG00020010937	patz1	100	59.389	MGP_CAROLIEiJ_G0016007	Patz1	100	59.389	Mus_caroli
ENSORLG00020010937	patz1	100	58.931	ENSMUSG00000020453	Patz1	100	58.931	Mus_musculus
ENSORLG00020010937	patz1	100	58.931	MGP_PahariEiJ_G0016884	Patz1	100	58.931	Mus_pahari
ENSORLG00020010937	patz1	100	58.931	MGP_SPRETEiJ_G0016846	Patz1	100	58.931	Mus_spretus
ENSORLG00020010937	patz1	100	58.537	ENSMLUG00000009942	PATZ1	100	58.626	Myotis_lucifugus
ENSORLG00020010937	patz1	100	58.626	ENSNGAG00000010268	Patz1	100	58.626	Nannospalax_galili
ENSORLG00020010937	patz1	100	80.709	ENSNBRG00000016032	patz1	100	80.709	Neolamprologus_brichardi
ENSORLG00020010937	patz1	71	55.400	ENSMEUG00000016293	PATZ1	97	55.400	Notamacropus_eugenii
ENSORLG00020010937	patz1	100	58.473	ENSODEG00000003589	PATZ1	100	58.473	Octodon_degus
ENSORLG00020010937	patz1	100	83.537	ENSONIG00000004248	patz1	100	83.537	Oreochromis_niloticus
ENSORLG00020010937	patz1	100	57.201	ENSOANG00000014654	PATZ1	100	57.337	Ornithorhynchus_anatinus
ENSORLG00020010937	patz1	100	99.144	ENSORLG00015007396	patz1	100	99.144	Oryzias_latipes_hsok
ENSORLG00020010937	patz1	100	93.056	ENSOMEG00000006636	patz1	100	93.056	Oryzias_melastigma
ENSORLG00020010937	patz1	100	56.735	ENSOGAG00000027905	PATZ1	100	56.871	Otolemur_garnettii
ENSORLG00020010937	patz1	100	58.626	ENSPPAG00000033227	PATZ1	100	58.779	Pan_paniscus
ENSORLG00020010937	patz1	100	58.473	ENSPPRG00000001573	PATZ1	100	58.626	Panthera_pardus
ENSORLG00020010937	patz1	89	56.220	ENSPTIG00000007937	PATZ1	91	56.338	Panthera_tigris_altaica
ENSORLG00020010937	patz1	100	58.626	ENSPTRG00000014268	PATZ1	100	58.779	Pan_troglodytes
ENSORLG00020010937	patz1	100	58.626	ENSPANG00000006821	PATZ1	98	58.779	Papio_anubis
ENSORLG00020010937	patz1	100	69.903	ENSPKIG00000019584	patz1	100	69.903	Paramormyrops_kingsleyae
ENSORLG00020010937	patz1	63	61.518	ENSPSIG00000011562	-	100	63.662	Pelodiscus_sinensis
ENSORLG00020010937	patz1	60	60.163	ENSPSIG00000016553	-	85	59.750	Pelodiscus_sinensis
ENSORLG00020010937	patz1	100	74.326	ENSPMGG00000010196	patz1	100	74.326	Periophthalmus_magnuspinnatus
ENSORLG00020010937	patz1	100	58.626	ENSPEMG00000005321	Patz1	100	58.626	Peromyscus_maniculatus_bairdii
ENSORLG00020010937	patz1	100	83.308	ENSPLAG00000010425	patz1	100	84.074	Poecilia_latipinna
ENSORLG00020010937	patz1	100	83.436	ENSPMEG00000000255	patz1	100	84.202	Poecilia_mexicana
ENSORLG00020010937	patz1	100	80.142	ENSPREG00000002440	patz1	100	84.818	Poecilia_reticulata
ENSORLG00020010937	patz1	100	56.463	ENSPPYG00000011732	PATZ1	100	56.599	Pongo_abelii
ENSORLG00020010937	patz1	100	58.779	ENSPCOG00000019729	PATZ1	100	58.931	Propithecus_coquereli
ENSORLG00020010937	patz1	100	56.463	ENSPVAG00000001749	PATZ1	100	56.599	Pteropus_vampyrus
ENSORLG00020010937	patz1	100	83.537	ENSPNYG00000013542	patz1	100	83.537	Pundamilia_nyererei
ENSORLG00020010937	patz1	88	63.323	ENSPNAG00000017222	patz1	100	66.745	Pygocentrus_nattereri
ENSORLG00020010937	patz1	100	58.626	ENSRBIG00000044231	PATZ1	100	58.779	Rhinopithecus_bieti
ENSORLG00020010937	patz1	100	58.626	ENSRROG00000037155	PATZ1	100	58.779	Rhinopithecus_roxellana
ENSORLG00020010937	patz1	100	58.626	ENSSBOG00000003894	PATZ1	100	58.779	Saimiri_boliviensis_boliviensis
ENSORLG00020010937	patz1	80	96.154	ENSSFOG00015013244	patz1	78	96.154	Scleropages_formosus
ENSORLG00020010937	patz1	99	56.047	ENSSPUG00000015298	PATZ1	97	56.490	Sphenodon_punctatus
ENSORLG00020010937	patz1	87	57.539	ENSSSCG00000010027	PATZ1	100	58.652	Sus_scrofa
ENSORLG00020010937	patz1	100	79.149	ENSTRUG00000015366	patz1	100	81.670	Takifugu_rubripes
ENSORLG00020010937	patz1	100	56.327	ENSTTRG00000010279	PATZ1	100	56.463	Tursiops_truncatus
ENSORLG00020010937	patz1	100	58.473	ENSUAMG00000015014	PATZ1	100	58.626	Ursus_americanus
ENSORLG00020010937	patz1	100	55.478	ENSXETG00000004190	patz1	100	56.356	Xenopus_tropicalis
ENSORLG00020010937	patz1	100	84.202	ENSXMAG00000015531	patz1	100	84.969	Xiphophorus_maculatus