EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020011028 (Gene tree)
Gene ID: -
Gene Symbol: trub2
Alias: -
Full Name: TruB pseudouridine (psi) synthase family member 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 8857 bases
Position: chr5:482760-491616
Accession: ZDB-GENE-040704-41
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020027854	TruB_N	PF01509.18	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020016706	-	6055	-	ENSORLP00020027854	340 (aa)	-	-

Gene Model

Click here to download ENSORLG00020011028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011028	trub2	92	50.155	ENSG00000167112	TRUB2	98	50.155	Homo_sapiens
ENSORLG00020011028	trub2	96	53.636	ENSAPOG00000018284	-	95	67.039	Acanthochromis_polyacanthus
ENSORLG00020011028	trub2	73	71.660	ENSAPOG00000015733	trub2	88	71.660	Acanthochromis_polyacanthus
ENSORLG00020011028	trub2	86	54.082	ENSAMEG00000015395	TRUB2	89	54.082	Ailuropoda_melanoleuca
ENSORLG00020011028	trub2	84	75.347	ENSACIG00000016500	trub2	90	73.826	Amphilophus_citrinellus
ENSORLG00020011028	trub2	96	69.697	ENSAOCG00000002330	trub2	96	69.697	Amphiprion_ocellaris
ENSORLG00020011028	trub2	94	70.807	ENSAPEG00000013177	trub2	94	70.807	Amphiprion_percula
ENSORLG00020011028	trub2	92	68.254	ENSATEG00000011371	trub2	94	71.141	Anabas_testudineus
ENSORLG00020011028	trub2	80	51.838	ENSAPLG00000009254	TRUB2	89	51.838	Anas_platyrhynchos
ENSORLG00020011028	trub2	81	52.000	ENSACAG00000007331	TRUB2	84	52.000	Anolis_carolinensis
ENSORLG00020011028	trub2	82	56.272	ENSANAG00000036234	TRUB2	90	56.272	Aotus_nancymaae
ENSORLG00020011028	trub2	92	68.615	ENSACLG00000010793	trub2	98	68.308	Astatotilapia_calliptera
ENSORLG00020011028	trub2	89	60.197	ENSAMXG00000031679	trub2	86	60.197	Astyanax_mexicanus
ENSORLG00020011028	trub2	82	55.556	ENSCJAG00000020009	TRUB2	84	55.556	Callithrix_jacchus
ENSORLG00020011028	trub2	86	52.381	ENSCAFG00000020068	TRUB2	89	52.381	Canis_familiaris
ENSORLG00020011028	trub2	51	52.023	ENSCAFG00020017325	-	97	52.023	Canis_lupus_dingo
ENSORLG00020011028	trub2	86	51.701	ENSCHIG00000021160	TRUB2	89	51.701	Capra_hircus
ENSORLG00020011028	trub2	86	53.061	ENSTSYG00000034163	TRUB2	89	53.061	Carlito_syrichta
ENSORLG00020011028	trub2	77	51.515	ENSCAPG00000000223	TRUB2	89	51.515	Cavia_aperea
ENSORLG00020011028	trub2	86	53.199	ENSCPOG00000013535	TRUB2	89	53.199	Cavia_porcellus
ENSORLG00020011028	trub2	81	52.347	ENSCCAG00000028463	-	84	52.347	Cebus_capucinus
ENSORLG00020011028	trub2	85	53.584	ENSCCAG00000026531	-	90	53.584	Cebus_capucinus
ENSORLG00020011028	trub2	92	50.774	ENSCATG00000038234	TRUB2	98	50.774	Cercocebus_atys
ENSORLG00020011028	trub2	86	53.199	ENSCLAG00000001702	TRUB2	91	53.199	Chinchilla_lanigera
ENSORLG00020011028	trub2	86	50.667	ENSCSAG00000014117	TRUB2	89	50.667	Chlorocebus_sabaeus
ENSORLG00020011028	trub2	86	51.877	ENSCHOG00000001555	TRUB2	89	51.877	Choloepus_hoffmanni
ENSORLG00020011028	trub2	90	52.751	ENSCPBG00000025186	TRUB2	89	52.751	Chrysemys_picta_bellii
ENSORLG00020011028	trub2	81	33.571	ENSCSAVG00000003930	-	86	32.857	Ciona_savignyi
ENSORLG00020011028	trub2	86	48.311	ENSCANG00000016135	TRUB2	88	48.311	Colobus_angolensis_palliatus
ENSORLG00020011028	trub2	86	51.014	ENSCGRG00001024441	Trub2	91	49.412	Cricetulus_griseus_chok1gshd
ENSORLG00020011028	trub2	86	51.014	ENSCGRG00000005633	Trub2	89	51.014	Cricetulus_griseus_crigri
ENSORLG00020011028	trub2	86	65.541	ENSCSEG00000001331	trub2	89	65.541	Cynoglossus_semilaevis
ENSORLG00020011028	trub2	90	71.475	ENSCVAG00000009901	trub2	92	71.475	Cyprinodon_variegatus
ENSORLG00020011028	trub2	86	61.224	ENSDARG00000028379	trub2	83	61.224	Danio_rerio
ENSORLG00020011028	trub2	86	51.361	ENSDNOG00000045679	-	89	51.361	Dasypus_novemcinctus
ENSORLG00020011028	trub2	76	36.364	ENSDNOG00000043967	-	78	35.496	Dasypus_novemcinctus
ENSORLG00020011028	trub2	90	50.323	ENSDORG00000016222	Trub2	96	51.148	Dipodomys_ordii
ENSORLG00020011028	trub2	82	32.042	FBgn0033060	CG7849	89	32.042	Drosophila_melanogaster
ENSORLG00020011028	trub2	85	51.536	ENSETEG00000009114	TRUB2	91	51.536	Echinops_telfairi
ENSORLG00020011028	trub2	63	43.662	ENSEBUG00000015723	trub2	80	43.662	Eptatretus_burgeri
ENSORLG00020011028	trub2	86	52.862	ENSEASG00005016819	TRUB2	90	52.862	Equus_asinus_asinus
ENSORLG00020011028	trub2	86	53.199	ENSECAG00000023520	TRUB2	90	53.199	Equus_caballus
ENSORLG00020011028	trub2	82	53.405	ENSEEUG00000008908	TRUB2	85	53.405	Erinaceus_europaeus
ENSORLG00020011028	trub2	85	64.356	ENSELUG00000002376	trub2	95	64.026	Esox_lucius
ENSORLG00020011028	trub2	89	53.571	ENSFCAG00000005839	TRUB2	96	53.571	Felis_catus
ENSORLG00020011028	trub2	81	52.000	ENSFALG00000001364	TRUB2	88	52.000	Ficedula_albicollis
ENSORLG00020011028	trub2	82	53.763	ENSFDAG00000021374	TRUB2	88	51.176	Fukomys_damarensis
ENSORLG00020011028	trub2	90	64.669	ENSFHEG00000014655	trub2	94	64.669	Fundulus_heteroclitus
ENSORLG00020011028	trub2	85	59.170	ENSGMOG00000000981	trub2	97	59.170	Gadus_morhua
ENSORLG00020011028	trub2	83	52.482	ENSGALG00000004920	TRUB2	69	51.049	Gallus_gallus
ENSORLG00020011028	trub2	90	71.835	ENSGAFG00000010107	trub2	94	71.835	Gambusia_affinis
ENSORLG00020011028	trub2	86	74.832	ENSGACG00000001476	trub2	90	74.832	Gasterosteus_aculeatus
ENSORLG00020011028	trub2	90	51.948	ENSGAGG00000022872	TRUB2	90	51.948	Gopherus_agassizii
ENSORLG00020011028	trub2	92	49.845	ENSGGOG00000014780	TRUB2	98	49.845	Gorilla_gorilla
ENSORLG00020011028	trub2	92	68.923	ENSHBUG00000022384	trub2	98	68.615	Haplochromis_burtoni
ENSORLG00020011028	trub2	86	51.701	ENSHGLG00000016715	TRUB2	89	51.701	Heterocephalus_glaber_female
ENSORLG00020011028	trub2	86	51.701	ENSHGLG00100016548	TRUB2	89	51.701	Heterocephalus_glaber_male
ENSORLG00020011028	trub2	94	66.562	ENSHCOG00000017748	trub2	98	66.562	Hippocampus_comes
ENSORLG00020011028	trub2	89	57.980	ENSIPUG00000017725	hdhd3	53	57.655	Ictalurus_punctatus
ENSORLG00020011028	trub2	86	50.847	ENSSTOG00000008024	-	89	50.847	Ictidomys_tridecemlineatus
ENSORLG00020011028	trub2	87	50.505	ENSSTOG00000022617	-	91	50.505	Ictidomys_tridecemlineatus
ENSORLG00020011028	trub2	82	48.029	ENSJJAG00000019181	Trub2	83	48.029	Jaculus_jaculus
ENSORLG00020011028	trub2	86	77.852	ENSKMAG00000007861	trub2	97	73.065	Kryptolebias_marmoratus
ENSORLG00020011028	trub2	86	71.672	ENSLBEG00000000907	trub2	86	71.672	Labrus_bergylta
ENSORLG00020011028	trub2	83	56.028	ENSLACG00000001515	TRUB2	84	56.028	Latimeria_chalumnae
ENSORLG00020011028	trub2	82	59.643	ENSLOCG00000000885	trub2	92	59.574	Lepisosteus_oculatus
ENSORLG00020011028	trub2	86	52.721	ENSLAFG00000002174	TRUB2	97	52.721	Loxodonta_africana
ENSORLG00020011028	trub2	85	53.925	ENSMFAG00000000881	TRUB2	89	53.925	Macaca_fascicularis
ENSORLG00020011028	trub2	85	53.925	ENSMMUG00000014146	TRUB2	89	53.925	Macaca_mulatta
ENSORLG00020011028	trub2	85	53.925	ENSMNEG00000011189	TRUB2	89	53.925	Macaca_nemestrina
ENSORLG00020011028	trub2	85	53.925	ENSMLEG00000037270	TRUB2	89	53.925	Mandrillus_leucophaeus
ENSORLG00020011028	trub2	86	73.064	ENSMAMG00000023643	trub2	98	72.542	Mastacembelus_armatus
ENSORLG00020011028	trub2	92	68.923	ENSMZEG00005016018	trub2	98	68.615	Maylandia_zebra
ENSORLG00020011028	trub2	57	55.440	ENSMGAG00000003894	TRUB2	97	55.440	Meleagris_gallopavo
ENSORLG00020011028	trub2	82	53.405	ENSMAUG00000010403	Trub2	89	51.351	Mesocricetus_auratus
ENSORLG00020011028	trub2	86	52.381	ENSMICG00000047032	TRUB2	89	52.381	Microcebus_murinus
ENSORLG00020011028	trub2	82	53.405	ENSMOCG00000014291	Trub2	92	53.405	Microtus_ochrogaster
ENSORLG00020011028	trub2	92	70.347	ENSMMOG00000021674	trub2	96	71.246	Mola_mola
ENSORLG00020011028	trub2	81	52.158	ENSMODG00000005940	TRUB2	94	51.799	Monodelphis_domestica
ENSORLG00020011028	trub2	96	66.967	ENSMALG00000021231	trub2	99	66.967	Monopterus_albus
ENSORLG00020011028	trub2	82	51.971	MGP_CAROLIEiJ_G0023368	Trub2	88	48.824	Mus_caroli
ENSORLG00020011028	trub2	82	51.971	ENSMUSG00000039826	Trub2	88	48.824	Mus_musculus
ENSORLG00020011028	trub2	82	52.330	MGP_PahariEiJ_G0024826	Trub2	88	49.412	Mus_pahari
ENSORLG00020011028	trub2	82	51.971	MGP_SPRETEiJ_G0024286	Trub2	88	48.824	Mus_spretus
ENSORLG00020011028	trub2	89	50.658	ENSMPUG00000013206	TRUB2	82	50.658	Mustela_putorius_furo
ENSORLG00020011028	trub2	85	53.425	ENSMLUG00000005256	TRUB2	88	53.425	Myotis_lucifugus
ENSORLG00020011028	trub2	85	50.342	ENSNGAG00000018679	Trub2	89	50.342	Nannospalax_galili
ENSORLG00020011028	trub2	95	67.890	ENSNBRG00000016294	trub2	98	67.584	Neolamprologus_brichardi
ENSORLG00020011028	trub2	92	50.155	ENSNLEG00000017556	TRUB2	98	50.155	Nomascus_leucogenys
ENSORLG00020011028	trub2	81	53.430	ENSMEUG00000000484	TRUB2	89	53.430	Notamacropus_eugenii
ENSORLG00020011028	trub2	86	50.000	ENSOPRG00000001981	TRUB2	89	50.000	Ochotona_princeps
ENSORLG00020011028	trub2	86	51.515	ENSODEG00000017292	TRUB2	91	51.515	Octodon_degus
ENSORLG00020011028	trub2	95	67.890	ENSONIG00000004230	trub2	98	67.584	Oreochromis_niloticus
ENSORLG00020011028	trub2	55	49.198	ENSOANG00000029023	-	83	49.198	Ornithorhynchus_anatinus
ENSORLG00020011028	trub2	86	53.401	ENSOCUG00000026296	TRUB2	81	53.401	Oryctolagus_cuniculus
ENSORLG00020011028	trub2	94	96.562	ENSORLG00000020011	trub2	96	96.562	Oryzias_latipes
ENSORLG00020011028	trub2	95	97.523	ENSORLG00015007494	trub2	99	97.523	Oryzias_latipes_hsok
ENSORLG00020011028	trub2	93	78.354	ENSOMEG00000006702	trub2	99	78.049	Oryzias_melastigma
ENSORLG00020011028	trub2	59	54.500	ENSOARG00000003785	-	87	52.273	Ovis_aries
ENSORLG00020011028	trub2	86	52.381	ENSOARG00000010579	-	89	52.381	Ovis_aries
ENSORLG00020011028	trub2	92	50.464	ENSPPAG00000043146	TRUB2	98	50.464	Pan_paniscus
ENSORLG00020011028	trub2	89	53.571	ENSPPRG00000006307	TRUB2	96	53.571	Panthera_pardus
ENSORLG00020011028	trub2	89	53.896	ENSPTIG00000012366	TRUB2	96	53.896	Panthera_tigris_altaica
ENSORLG00020011028	trub2	92	50.155	ENSPTRG00000021423	TRUB2	98	50.155	Pan_troglodytes
ENSORLG00020011028	trub2	92	50.155	ENSPTRG00000052151	-	98	50.155	Pan_troglodytes
ENSORLG00020011028	trub2	85	53.925	ENSPANG00000025856	TRUB2	89	53.925	Papio_anubis
ENSORLG00020011028	trub2	82	65.714	ENSPKIG00000019769	trub2	92	65.714	Paramormyrops_kingsleyae
ENSORLG00020011028	trub2	81	51.439	ENSPSIG00000015701	TRUB2	92	51.439	Pelodiscus_sinensis
ENSORLG00020011028	trub2	88	67.881	ENSPMGG00000010206	trub2	95	67.550	Periophthalmus_magnuspinnatus
ENSORLG00020011028	trub2	86	51.178	ENSPEMG00000017893	Trub2	89	51.178	Peromyscus_maniculatus_bairdii
ENSORLG00020011028	trub2	81	53.791	ENSPCIG00000026731	TRUB2	92	52.982	Phascolarctos_cinereus
ENSORLG00020011028	trub2	90	71.069	ENSPFOG00000018018	trub2	85	69.325	Poecilia_formosa
ENSORLG00020011028	trub2	90	70.755	ENSPLAG00000010484	trub2	93	69.018	Poecilia_latipinna
ENSORLG00020011028	trub2	90	70.978	ENSPMEG00000012913	trub2	95	70.846	Poecilia_mexicana
ENSORLG00020011028	trub2	90	70.219	ENSPREG00000002549	trub2	94	70.219	Poecilia_reticulata
ENSORLG00020011028	trub2	85	53.584	ENSPPYG00000019650	TRUB2	90	53.584	Pongo_abelii
ENSORLG00020011028	trub2	85	53.082	ENSPCAG00000015068	TRUB2	89	53.082	Procavia_capensis
ENSORLG00020011028	trub2	86	53.559	ENSPCOG00000017100	TRUB2	89	53.559	Propithecus_coquereli
ENSORLG00020011028	trub2	80	51.812	ENSPVAG00000001224	TRUB2	93	51.812	Pteropus_vampyrus
ENSORLG00020011028	trub2	92	68.923	ENSPNYG00000013666	trub2	98	68.615	Pundamilia_nyererei
ENSORLG00020011028	trub2	95	57.143	ENSPNAG00000017292	trub2	93	57.447	Pygocentrus_nattereri
ENSORLG00020011028	trub2	82	51.971	ENSRNOG00000043189	Trub2	86	51.971	Rattus_norvegicus
ENSORLG00020011028	trub2	92	46.130	ENSRBIG00000006965	TRUB2	97	46.130	Rhinopithecus_bieti
ENSORLG00020011028	trub2	92	50.464	ENSRROG00000042928	TRUB2	98	50.464	Rhinopithecus_roxellana
ENSORLG00020011028	trub2	85	53.584	ENSSBOG00000022439	TRUB2	89	53.584	Saimiri_boliviensis_boliviensis
ENSORLG00020011028	trub2	81	63.177	ENSSFOG00015013391	trub2	89	63.177	Scleropages_formosus
ENSORLG00020011028	trub2	93	71.875	ENSSMAG00000020820	trub2	97	71.875	Scophthalmus_maximus
ENSORLG00020011028	trub2	84	74.048	ENSSDUG00000016928	trub2	91	70.820	Seriola_dumerili
ENSORLG00020011028	trub2	84	73.356	ENSSLDG00000024701	trub2	92	70.033	Seriola_lalandi_dorsalis
ENSORLG00020011028	trub2	84	51.748	ENSSPUG00000015515	TRUB2	85	51.748	Sphenodon_punctatus
ENSORLG00020011028	trub2	91	71.924	ENSSPAG00000017865	trub2	96	71.293	Stegastes_partitus
ENSORLG00020011028	trub2	86	52.721	ENSSSCG00000005645	TRUB2	89	51.331	Sus_scrofa
ENSORLG00020011028	trub2	75	53.937	ENSTGUG00000003704	TRUB2	97	53.937	Taeniopygia_guttata
ENSORLG00020011028	trub2	92	65.831	ENSTRUG00000015499	trub2	98	66.144	Takifugu_rubripes
ENSORLG00020011028	trub2	84	70.588	ENSTNIG00000014721	trub2	99	70.588	Tetraodon_nigroviridis
ENSORLG00020011028	trub2	56	49.741	ENSTBEG00000000586	TRUB2	86	49.741	Tupaia_belangeri
ENSORLG00020011028	trub2	86	51.020	ENSTTRG00000016486	TRUB2	89	51.020	Tursiops_truncatus
ENSORLG00020011028	trub2	86	53.401	ENSUAMG00000020276	TRUB2	86	53.401	Ursus_americanus
ENSORLG00020011028	trub2	86	53.401	ENSUMAG00000022051	TRUB2	86	53.401	Ursus_maritimus
ENSORLG00020011028	trub2	86	40.614	ENSVPAG00000005793	TRUB2	93	40.614	Vicugna_pacos
ENSORLG00020011028	trub2	86	52.381	ENSVVUG00000013451	TRUB2	84	52.381	Vulpes_vulpes
ENSORLG00020011028	trub2	83	54.770	ENSXETG00000003973	trub2	87	54.770	Xenopus_tropicalis
ENSORLG00020011028	trub2	90	70.662	ENSXCOG00000008759	trub2	94	70.662	Xiphophorus_couchianus
ENSORLG00020011028	trub2	90	70.978	ENSXMAG00000015478	trub2	94	70.978	Xiphophorus_maculatus