EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020011284 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 10155 bases
Position: chr8:4144297-4154451
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020010367	MMR_HSR1	PF01926.23	5.8e-14	1	1
ENSORLP00020028003	MMR_HSR1	PF01926.23	5.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020017002	-	2289	-	ENSORLP00020010357	624 (aa)	-	-
ENSORLT00020016980	-	2464	-	ENSORLP00020028003	570 (aa)	-	-
ENSORLT00020016988	-	2070	-	ENSORLP00020010367	689 (aa)	-	-

Gene Model

Click here to download ENSORLG00020011284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020011284	-	88	30.769	ENSORLG00020017380	-	94	30.769
ENSORLG00020011284	-	73	34.591	ENSORLG00020017387	-	93	34.591
ENSORLG00020011284	-	80	35.149	ENSORLG00020015638	si:ch73-285p12.4	96	34.466
ENSORLG00020011284	-	71	34.951	ENSORLG00020017350	-	90	37.126
ENSORLG00020011284	-	60	37.121	ENSORLG00020012284	-	61	37.121
ENSORLG00020011284	-	79	34.896	ENSORLG00020016100	-	63	34.896
ENSORLG00020011284	-	76	31.944	ENSORLG00020021874	si:ch211-113e8.5	83	31.579
ENSORLG00020011284	-	81	40.851	ENSORLG00020008323	-	72	40.851
ENSORLG00020011284	-	73	33.143	ENSORLG00020008404	-	61	33.143
ENSORLG00020011284	-	75	35.000	ENSORLG00020006259	-	75	34.597
ENSORLG00020011284	-	70	30.806	ENSORLG00020009815	-	64	30.806
ENSORLG00020011284	-	69	31.646	ENSORLG00020017391	-	60	31.646
ENSORLG00020011284	-	76	31.746	ENSORLG00020006506	-	59	33.175
ENSORLG00020011284	-	81	40.611	ENSORLG00020008286	-	91	40.611
ENSORLG00020011284	-	81	30.374	ENSORLG00020014225	-	77	30.374
ENSORLG00020011284	-	76	31.950	ENSORLG00020012266	-	82	31.950

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011284	-	82	40.373	ENSAPOG00000006502	-	58	40.373	Acanthochromis_polyacanthus
ENSORLG00020011284	-	83	70.107	ENSAPOG00000019154	-	62	70.107	Acanthochromis_polyacanthus
ENSORLG00020011284	-	82	63.158	ENSACIG00000007725	-	79	73.239	Amphilophus_citrinellus
ENSORLG00020011284	-	71	68.354	ENSACIG00000007737	-	72	68.293	Amphilophus_citrinellus
ENSORLG00020011284	-	78	39.378	ENSACIG00000009811	-	87	39.378	Amphilophus_citrinellus
ENSORLG00020011284	-	72	72.727	ENSAOCG00000003425	-	68	72.727	Amphiprion_ocellaris
ENSORLG00020011284	-	83	38.940	ENSAOCG00000004579	-	89	38.060	Amphiprion_ocellaris
ENSORLG00020011284	-	83	74.316	ENSAPEG00000001491	-	70	74.316	Amphiprion_percula
ENSORLG00020011284	-	81	38.710	ENSAPEG00000014403	-	78	38.710	Amphiprion_percula
ENSORLG00020011284	-	80	70.918	ENSATEG00000023053	-	100	70.536	Anabas_testudineus
ENSORLG00020011284	-	89	39.241	ENSATEG00000015654	-	89	39.241	Anabas_testudineus
ENSORLG00020011284	-	82	40.336	ENSACLG00000014795	-	76	40.336	Astatotilapia_calliptera
ENSORLG00020011284	-	82	42.632	ENSAMXG00000021387	-	69	43.316	Astyanax_mexicanus
ENSORLG00020011284	-	80	46.983	ENSAMXG00000030744	-	96	46.983	Astyanax_mexicanus
ENSORLG00020011284	-	71	37.222	ENSAMXG00000009216	-	98	37.222	Astyanax_mexicanus
ENSORLG00020011284	-	82	40.909	ENSAMXG00000019109	-	99	40.909	Astyanax_mexicanus
ENSORLG00020011284	-	72	41.791	ENSAMXG00000026085	-	94	39.908	Astyanax_mexicanus
ENSORLG00020011284	-	80	36.316	ENSAMXG00000033117	-	96	36.916	Astyanax_mexicanus
ENSORLG00020011284	-	82	37.037	ENSAMXG00000006064	-	88	37.037	Astyanax_mexicanus
ENSORLG00020011284	-	83	63.713	ENSCSEG00000021519	-	91	56.724	Cynoglossus_semilaevis
ENSORLG00020011284	-	81	65.693	ENSCVAG00000003054	-	95	65.693	Cyprinodon_variegatus
ENSORLG00020011284	-	80	37.615	ENSCVAG00000012268	-	96	37.615	Cyprinodon_variegatus
ENSORLG00020011284	-	75	39.691	ENSCVAG00000005778	-	83	39.691	Cyprinodon_variegatus
ENSORLG00020011284	-	86	52.370	ENSDARG00000063481	si:ch211-214j24.15	71	51.310	Danio_rerio
ENSORLG00020011284	-	75	40.625	ENSDARG00000102683	CR626941.1	85	42.920	Danio_rerio
ENSORLG00020011284	-	73	50.794	ENSELUG00000024502	-	82	49.490	Esox_lucius
ENSORLG00020011284	-	73	37.895	ENSELUG00000003217	-	93	37.186	Esox_lucius
ENSORLG00020011284	-	74	47.895	ENSELUG00000018192	-	90	52.151	Esox_lucius
ENSORLG00020011284	-	73	40.513	ENSELUG00000018709	-	72	39.437	Esox_lucius
ENSORLG00020011284	-	81	35.025	ENSFHEG00000020783	-	99	37.037	Fundulus_heteroclitus
ENSORLG00020011284	-	64	79.474	ENSFHEG00000023334	-	74	79.474	Fundulus_heteroclitus
ENSORLG00020011284	-	71	59.218	ENSGMOG00000001626	-	100	62.651	Gadus_morhua
ENSORLG00020011284	-	79	35.028	ENSGAFG00000020826	-	98	35.028	Gambusia_affinis
ENSORLG00020011284	-	79	40.000	ENSHBUG00000001242	-	61	39.583	Haplochromis_burtoni
ENSORLG00020011284	-	81	61.656	ENSHBUG00000008326	-	100	61.656	Haplochromis_burtoni
ENSORLG00020011284	-	77	41.176	ENSHBUG00000016284	-	99	42.326	Haplochromis_burtoni
ENSORLG00020011284	-	74	39.691	ENSIPUG00000013342	-	83	39.691	Ictalurus_punctatus
ENSORLG00020011284	-	80	71.533	ENSKMAG00000009600	-	97	71.533	Kryptolebias_marmoratus
ENSORLG00020011284	-	72	42.703	ENSKMAG00000014605	-	72	42.703	Kryptolebias_marmoratus
ENSORLG00020011284	-	84	38.793	ENSKMAG00000004774	-	82	38.793	Kryptolebias_marmoratus
ENSORLG00020011284	-	78	40.260	ENSKMAG00000014764	-	100	40.260	Kryptolebias_marmoratus
ENSORLG00020011284	-	76	39.409	ENSLBEG00000019652	-	80	40.513	Labrus_bergylta
ENSORLG00020011284	-	75	45.226	ENSLOCG00000012075	-	95	45.226	Lepisosteus_oculatus
ENSORLG00020011284	-	77	43.407	ENSLOCG00000016496	-	68	41.364	Lepisosteus_oculatus
ENSORLG00020011284	-	75	44.608	ENSLOCG00000017852	-	89	43.439	Lepisosteus_oculatus
ENSORLG00020011284	-	74	49.206	ENSLOCG00000018072	-	93	45.327	Lepisosteus_oculatus
ENSORLG00020011284	-	76	44.041	ENSLOCG00000000517	-	76	41.224	Lepisosteus_oculatus
ENSORLG00020011284	-	76	42.391	ENSLOCG00000000385	-	78	42.703	Lepisosteus_oculatus
ENSORLG00020011284	-	77	45.192	ENSLOCG00000000082	-	84	44.493	Lepisosteus_oculatus
ENSORLG00020011284	-	81	39.578	ENSMAMG00000015600	-	77	39.578	Mastacembelus_armatus
ENSORLG00020011284	-	83	68.996	ENSMAMG00000021969	-	61	68.996	Mastacembelus_armatus
ENSORLG00020011284	-	83	67.442	ENSMAMG00000021970	-	100	69.014	Mastacembelus_armatus
ENSORLG00020011284	-	77	39.548	ENSMMOG00000012876	-	72	39.827	Mola_mola
ENSORLG00020011284	-	81	52.212	ENSMMOG00000016860	-	91	52.212	Mola_mola
ENSORLG00020011284	-	74	63.030	ENSMMOG00000016864	-	74	63.030	Mola_mola
ENSORLG00020011284	-	79	42.411	ENSNBRG00000002136	-	78	42.411	Neolamprologus_brichardi
ENSORLG00020011284	-	83	97.684	ENSORLG00000002537	-	70	97.684	Oryzias_latipes
ENSORLG00020011284	-	81	39.030	ENSORLG00000002031	-	73	39.030	Oryzias_latipes
ENSORLG00020011284	-	83	97.468	ENSORLG00015004110	-	70	97.468	Oryzias_latipes_hsok
ENSORLG00020011284	-	66	34.839	ENSORLG00015023234	-	90	36.416	Oryzias_latipes_hsok
ENSORLG00020011284	-	81	38.703	ENSORLG00015004522	-	71	38.703	Oryzias_latipes_hsok
ENSORLG00020011284	-	83	90.105	ENSOMEG00000020433	-	92	90.105	Oryzias_melastigma
ENSORLG00020011284	-	82	40.741	ENSOMEG00000010594	-	89	41.289	Oryzias_melastigma
ENSORLG00020011284	-	74	50.000	ENSPKIG00000017193	-	86	50.270	Paramormyrops_kingsleyae
ENSORLG00020011284	-	82	47.391	ENSPKIG00000017688	-	87	47.391	Paramormyrops_kingsleyae
ENSORLG00020011284	-	82	57.353	ENSPMGG00000014055	-	89	64.384	Periophthalmus_magnuspinnatus
ENSORLG00020011284	-	83	60.714	ENSPMGG00000014056	-	96	60.714	Periophthalmus_magnuspinnatus
ENSORLG00020011284	-	76	37.436	ENSPMGG00000017993	-	87	37.436	Periophthalmus_magnuspinnatus
ENSORLG00020011284	-	79	37.989	ENSPFOG00000005689	si:dkey-185m8.2	87	36.585	Poecilia_formosa
ENSORLG00020011284	-	72	41.818	ENSPFOG00000022479	-	86	41.818	Poecilia_formosa
ENSORLG00020011284	-	89	38.060	ENSPFOG00000013349	-	90	38.060	Poecilia_formosa
ENSORLG00020011284	-	83	40.091	ENSPFOG00000015865	-	99	40.091	Poecilia_formosa
ENSORLG00020011284	-	86	36.226	ENSPFOG00000013109	-	98	38.479	Poecilia_formosa
ENSORLG00020011284	-	79	45.732	ENSPFOG00000000191	-	92	37.657	Poecilia_formosa
ENSORLG00020011284	-	87	37.572	ENSPFOG00000015875	-	97	37.572	Poecilia_formosa
ENSORLG00020011284	-	81	37.684	ENSPFOG00000015871	-	94	37.684	Poecilia_formosa
ENSORLG00020011284	-	79	39.344	ENSPFOG00000006124	-	98	39.344	Poecilia_formosa
ENSORLG00020011284	-	83	38.351	ENSPFOG00000012732	-	87	38.351	Poecilia_formosa
ENSORLG00020011284	-	82	40.909	ENSPFOG00000016787	-	96	41.361	Poecilia_formosa
ENSORLG00020011284	-	83	40.326	ENSPFOG00000022853	-	98	40.326	Poecilia_formosa
ENSORLG00020011284	-	74	37.989	ENSPLAG00000018664	-	85	37.989	Poecilia_latipinna
ENSORLG00020011284	-	68	42.038	ENSPLAG00000018911	-	70	42.038	Poecilia_latipinna
ENSORLG00020011284	-	73	41.489	ENSPLAG00000018606	-	83	40.394	Poecilia_latipinna
ENSORLG00020011284	-	82	40.090	ENSPLAG00000003020	-	92	40.090	Poecilia_latipinna
ENSORLG00020011284	-	75	42.439	ENSPLAG00000020776	-	91	42.439	Poecilia_latipinna
ENSORLG00020011284	-	73	33.051	ENSPLAG00000018692	-	86	42.657	Poecilia_latipinna
ENSORLG00020011284	-	83	40.506	ENSPMEG00000005912	-	88	38.683	Poecilia_mexicana
ENSORLG00020011284	-	79	35.000	ENSPMEG00000000724	-	71	35.000	Poecilia_mexicana
ENSORLG00020011284	-	85	38.060	ENSPMEG00000020297	-	94	43.796	Poecilia_mexicana
ENSORLG00020011284	-	79	33.621	ENSPMEG00000006334	-	91	33.621	Poecilia_mexicana
ENSORLG00020011284	-	62	44.375	ENSPMEG00000010605	-	65	44.375	Poecilia_mexicana
ENSORLG00020011284	-	69	42.675	ENSPMEG00000018950	-	73	42.675	Poecilia_mexicana
ENSORLG00020011284	-	82	40.404	ENSPMEG00000000604	-	77	40.404	Poecilia_mexicana
ENSORLG00020011284	-	62	43.558	ENSPMEG00000020252	-	75	43.713	Poecilia_mexicana
ENSORLG00020011284	-	82	38.526	ENSPREG00000020440	-	81	38.526	Poecilia_reticulata
ENSORLG00020011284	-	81	40.249	ENSPREG00000001250	-	94	40.249	Poecilia_reticulata
ENSORLG00020011284	-	86	37.584	ENSPREG00000001530	-	88	37.584	Poecilia_reticulata
ENSORLG00020011284	-	79	41.935	ENSPNYG00000010004	-	84	38.793	Pundamilia_nyererei
ENSORLG00020011284	-	79	45.887	ENSPNAG00000002097	-	93	45.887	Pygocentrus_nattereri
ENSORLG00020011284	-	74	43.350	ENSPNAG00000025850	-	93	42.358	Pygocentrus_nattereri
ENSORLG00020011284	-	79	39.423	ENSPNAG00000013132	-	68	39.423	Pygocentrus_nattereri
ENSORLG00020011284	-	77	40.654	ENSPNAG00000019899	-	93	40.654	Pygocentrus_nattereri
ENSORLG00020011284	-	84	37.500	ENSPNAG00000014932	-	68	38.298	Pygocentrus_nattereri
ENSORLG00020011284	-	75	44.324	ENSSFOG00015002420	-	79	44.324	Scleropages_formosus
ENSORLG00020011284	-	74	35.106	ENSSFOG00015002507	-	96	35.106	Scleropages_formosus
ENSORLG00020011284	-	79	33.898	ENSSFOG00015002503	-	89	33.898	Scleropages_formosus
ENSORLG00020011284	-	83	65.684	ENSSMAG00000012187	-	69	65.451	Scophthalmus_maximus
ENSORLG00020011284	-	81	71.429	ENSSDUG00000022299	-	93	71.429	Seriola_dumerili
ENSORLG00020011284	-	83	46.552	ENSSLDG00000009168	-	99	42.291	Seriola_lalandi_dorsalis
ENSORLG00020011284	-	83	37.732	ENSSLDG00000010531	-	98	37.759	Seriola_lalandi_dorsalis
ENSORLG00020011284	-	83	72.152	ENSSLDG00000005786	-	69	72.152	Seriola_lalandi_dorsalis
ENSORLG00020011284	-	82	73.494	ENSSPAG00000017616	-	90	73.494	Stegastes_partitus
ENSORLG00020011284	-	75	43.939	ENSSPAG00000015927	-	89	42.328	Stegastes_partitus
ENSORLG00020011284	-	82	62.115	ENSTRUG00000020422	-	85	62.115	Takifugu_rubripes
ENSORLG00020011284	-	82	39.024	ENSTRUG00000018070	-	85	38.554	Takifugu_rubripes
ENSORLG00020011284	-	79	51.965	ENSTNIG00000004275	-	97	51.965	Tetraodon_nigroviridis
ENSORLG00020011284	-	74	67.778	ENSTNIG00000004220	-	91	68.362	Tetraodon_nigroviridis
ENSORLG00020011284	-	76	41.126	ENSXCOG00000018421	-	99	41.126	Xiphophorus_couchianus
ENSORLG00020011284	-	74	37.430	ENSXCOG00000009005	-	90	39.655	Xiphophorus_couchianus
ENSORLG00020011284	-	86	37.378	ENSXMAG00000023360	-	89	37.378	Xiphophorus_maculatus