EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020011413 (Gene tree)
Gene ID: -
Gene Symbol: rrp8
Alias: -
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3670 bases
Position: chr13:8749183-8752852
Accession: ZDB-GENE-030131-8898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028112	Methyltransf_8	PF05148.15	4.6e-91	1	1
ENSORLP00020010494	Methyltransf_8	PF05148.15	2.7e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020031361	-	1837	-	ENSORLP00020028112	556 (aa)	-	-
ENSORLT00020017182	-	1882	-	ENSORLP00020010494	571 (aa)	-	-

Gene Model

Click here to download ENSORLG00020011413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011413's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011413	rrp8	99	61.646	ENSAPOG00000008509	-	100	61.796	Acanthochromis_polyacanthus
ENSORLG00020011413	rrp8	99	61.739	ENSAPOG00000010798	-	98	61.888	Acanthochromis_polyacanthus
ENSORLG00020011413	rrp8	99	61.739	ENSAPOG00000010806	rrp8	98	61.888	Acanthochromis_polyacanthus
ENSORLG00020011413	rrp8	50	52.797	ENSAMEG00000016307	RRP8	53	53.252	Ailuropoda_melanoleuca
ENSORLG00020011413	rrp8	93	56.250	ENSACIG00000019896	rrp8	99	57.089	Amphilophus_citrinellus
ENSORLG00020011413	rrp8	99	61.471	ENSAOCG00000008785	rrp8	100	61.796	Amphiprion_ocellaris
ENSORLG00020011413	rrp8	99	62.039	ENSAPEG00000008416	rrp8	100	62.434	Amphiprion_percula
ENSORLG00020011413	rrp8	92	59.701	ENSATEG00000014110	rrp8	99	60.075	Anabas_testudineus
ENSORLG00020011413	rrp8	99	62.567	ENSACLG00000002746	rrp8	100	61.456	Astatotilapia_calliptera
ENSORLG00020011413	rrp8	99	46.073	ENSAMXG00000005164	rrp8	100	44.503	Astyanax_mexicanus
ENSORLG00020011413	rrp8	50	52.650	ENSCAFG00020009685	RRP8	53	53.086	Canis_lupus_dingo
ENSORLG00020011413	rrp8	51	51.351	ENSTSYG00000003391	RRP8	77	63.303	Carlito_syrichta
ENSORLG00020011413	rrp8	51	47.841	ENSCLAG00000016099	RRP8	63	47.973	Chinchilla_lanigera
ENSORLG00020011413	rrp8	56	36.646	ENSCING00000003281	-	88	36.646	Ciona_intestinalis
ENSORLG00020011413	rrp8	76	40.749	ENSCSAVG00000006435	-	94	40.749	Ciona_savignyi
ENSORLG00020011413	rrp8	71	58.481	ENSCSEG00000007330	rrp8	100	57.975	Cynoglossus_semilaevis
ENSORLG00020011413	rrp8	99	55.203	ENSCVAG00000012032	rrp8	100	55.536	Cyprinodon_variegatus
ENSORLG00020011413	rrp8	93	48.491	ENSDARG00000071652	rrp8	80	74.775	Danio_rerio
ENSORLG00020011413	rrp8	99	47.176	ENSELUG00000008665	rrp8	100	47.421	Esox_lucius
ENSORLG00020011413	rrp8	72	52.109	ENSGMOG00000007188	rrp8	94	51.861	Gadus_morhua
ENSORLG00020011413	rrp8	86	54.694	ENSGAFG00000012331	rrp8	99	54.490	Gambusia_affinis
ENSORLG00020011413	rrp8	78	54.042	ENSGACG00000011343	rrp8	100	53.811	Gasterosteus_aculeatus
ENSORLG00020011413	rrp8	99	62.389	ENSHBUG00000017131	rrp8	100	61.141	Haplochromis_burtoni
ENSORLG00020011413	rrp8	99	50.802	ENSHCOG00000001293	rrp8	100	50.980	Hippocampus_comes
ENSORLG00020011413	rrp8	93	45.298	ENSIPUG00000017733	rrp8	100	42.478	Ictalurus_punctatus
ENSORLG00020011413	rrp8	99	59.266	ENSKMAG00000009229	rrp8	100	58.566	Kryptolebias_marmoratus
ENSORLG00020011413	rrp8	69	61.026	ENSLBEG00000019937	rrp8	100	61.000	Labrus_bergylta
ENSORLG00020011413	rrp8	99	46.797	ENSLOCG00000009591	rrp8	100	46.429	Lepisosteus_oculatus
ENSORLG00020011413	rrp8	99	61.632	ENSMAMG00000009679	rrp8	100	60.764	Mastacembelus_armatus
ENSORLG00020011413	rrp8	99	62.567	ENSMZEG00005008926	rrp8	100	61.456	Maylandia_zebra
ENSORLG00020011413	rrp8	93	56.309	ENSMMOG00000015709	rrp8	99	56.685	Mola_mola
ENSORLG00020011413	rrp8	99	59.790	ENSMALG00000015984	rrp8	100	59.194	Monopterus_albus
ENSORLG00020011413	rrp8	51	53.265	ENSMPUG00000005510	RRP8	63	51.852	Mustela_putorius_furo
ENSORLG00020011413	rrp8	57	49.686	ENSNGAG00000012450	Rrp8	67	49.686	Nannospalax_galili
ENSORLG00020011413	rrp8	74	62.648	ENSNBRG00000023416	rrp8	98	62.559	Neolamprologus_brichardi
ENSORLG00020011413	rrp8	73	57.831	ENSONIG00000016861	rrp8	96	55.448	Oreochromis_niloticus
ENSORLG00020011413	rrp8	100	96.948	ENSORLG00000004175	rrp8	100	96.948	Oryzias_latipes
ENSORLG00020011413	rrp8	100	97.491	ENSORLG00015015410	rrp8	100	97.491	Oryzias_latipes_hsok
ENSORLG00020011413	rrp8	99	80.071	ENSOMEG00000003161	rrp8	100	79.715	Oryzias_melastigma
ENSORLG00020011413	rrp8	99	48.110	ENSPKIG00000024217	rrp8	100	46.827	Paramormyrops_kingsleyae
ENSORLG00020011413	rrp8	78	39.381	ENSPEMG00000017257	Rrp8	88	38.976	Peromyscus_maniculatus_bairdii
ENSORLG00020011413	rrp8	99	56.460	ENSPFOG00000007308	rrp8	100	55.258	Poecilia_formosa
ENSORLG00020011413	rrp8	99	57.371	ENSPLAG00000011349	rrp8	100	55.971	Poecilia_latipinna
ENSORLG00020011413	rrp8	99	57.016	ENSPMEG00000009888	rrp8	100	56.150	Poecilia_mexicana
ENSORLG00020011413	rrp8	86	51.479	ENSPREG00000008450	rrp8	99	53.427	Poecilia_reticulata
ENSORLG00020011413	rrp8	99	62.433	ENSPNYG00000002878	rrp8	100	61.400	Pundamilia_nyererei
ENSORLG00020011413	rrp8	99	46.410	ENSPNAG00000024779	rrp8	100	46.341	Pygocentrus_nattereri
ENSORLG00020011413	rrp8	99	47.423	ENSSFOG00015003917	rrp8	99	47.059	Scleropages_formosus
ENSORLG00020011413	rrp8	99	61.552	ENSSMAG00000004859	rrp8	100	59.895	Scophthalmus_maximus
ENSORLG00020011413	rrp8	99	61.285	ENSSDUG00000010477	rrp8	100	59.896	Seriola_dumerili
ENSORLG00020011413	rrp8	99	61.713	ENSSLDG00000000521	rrp8	100	61.189	Seriola_lalandi_dorsalis
ENSORLG00020011413	rrp8	69	63.250	ENSSPAG00000006664	rrp8	79	85.849	Stegastes_partitus
ENSORLG00020011413	rrp8	99	57.348	ENSTRUG00000021812	rrp8	100	56.912	Takifugu_rubripes
ENSORLG00020011413	rrp8	51	52.234	ENSUAMG00000025756	RRP8	77	63.303	Ursus_americanus
ENSORLG00020011413	rrp8	51	52.234	ENSUMAG00000000528	RRP8	52	52.590	Ursus_maritimus
ENSORLG00020011413	rrp8	57	48.438	ENSVVUG00000024346	RRP8	72	47.812	Vulpes_vulpes
ENSORLG00020011413	rrp8	71	57.935	ENSXCOG00000006156	rrp8	100	57.935	Xiphophorus_couchianus
ENSORLG00020011413	rrp8	99	55.360	ENSXMAG00000005011	rrp8	100	55.714	Xiphophorus_maculatus