EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020011427 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3744 bases
Position: chr1:21415414-21419157
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028116	RVT_1	PF00078.27	5.4e-43	1	1
ENSORLP00020028116	RNase_H	PF00075.24	2.4e-10	1	1
ENSORLP00020028116	Exo_endo_phos	PF03372.23	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020017188	-	3744	-	ENSORLP00020028116	1247 (aa)	-	-

Gene Model

Click here to download ENSORLG00020011427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020011427	-	100	99.679	ENSORLG00020020238	-	100	99.679
ENSORLG00020011427	-	100	99.679	ENSORLG00020018543	-	100	99.679
ENSORLG00020011427	-	71	99.775	ENSORLG00020019901	-	100	99.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011427	-	99	44.524	ENSAMXG00000043500	-	99	44.524	Astyanax_mexicanus
ENSORLG00020011427	-	100	46.135	ENSDARG00000099201	BX908731.1	100	46.135	Danio_rerio
ENSORLG00020011427	-	100	46.135	ENSDARG00000103037	CR848788.1	100	46.135	Danio_rerio
ENSORLG00020011427	-	100	45.433	ENSDARG00000103436	BX548028.1	99	45.433	Danio_rerio
ENSORLG00020011427	-	65	47.794	ENSKMAG00000021014	-	100	47.794	Kryptolebias_marmoratus
ENSORLG00020011427	-	99	46.062	ENSKMAG00000004415	-	100	46.062	Kryptolebias_marmoratus
ENSORLG00020011427	-	68	45.902	ENSKMAG00000012711	-	100	45.902	Kryptolebias_marmoratus
ENSORLG00020011427	-	99	46.062	ENSKMAG00000003982	-	100	46.062	Kryptolebias_marmoratus
ENSORLG00020011427	-	100	97.354	ENSORLG00000023592	-	100	97.354	Oryzias_latipes
ENSORLG00020011427	-	100	97.273	ENSORLG00000026314	-	100	97.273	Oryzias_latipes
ENSORLG00020011427	-	100	97.674	ENSORLG00000027174	-	100	97.674	Oryzias_latipes
ENSORLG00020011427	-	100	98.957	ENSORLG00000024423	-	100	98.957	Oryzias_latipes
ENSORLG00020011427	-	88	97.806	ENSORLG00015013792	-	100	97.806	Oryzias_latipes_hsok
ENSORLG00020011427	-	85	48.730	ENSOMEG00000003836	-	98	48.730	Oryzias_melastigma
ENSORLG00020011427	-	97	46.367	ENSPKIG00000019189	-	96	46.367	Paramormyrops_kingsleyae
ENSORLG00020011427	-	99	46.215	ENSXMAG00000021061	-	100	46.338	Xiphophorus_maculatus
ENSORLG00020011427	-	90	46.134	ENSXMAG00000026248	-	99	46.134	Xiphophorus_maculatus
ENSORLG00020011427	-	71	44.049	ENSXMAG00000024143	-	100	44.049	Xiphophorus_maculatus
ENSORLG00020011427	-	63	46.212	ENSXMAG00000023377	-	100	46.212	Xiphophorus_maculatus
ENSORLG00020011427	-	99	47.419	ENSXMAG00000021755	-	100	47.419	Xiphophorus_maculatus
ENSORLG00020011427	-	78	45.020	ENSXMAG00000029923	-	99	43.961	Xiphophorus_maculatus
ENSORLG00020011427	-	90	46.134	ENSXMAG00000022223	-	99	46.134	Xiphophorus_maculatus
ENSORLG00020011427	-	64	45.916	ENSXMAG00000023126	-	100	45.916	Xiphophorus_maculatus
ENSORLG00020011427	-	82	44.058	ENSXMAG00000027130	-	99	44.251	Xiphophorus_maculatus
ENSORLG00020011427	-	69	45.757	ENSXMAG00000020874	-	95	45.757	Xiphophorus_maculatus
ENSORLG00020011427	-	92	43.680	ENSXMAG00000029466	-	99	43.680	Xiphophorus_maculatus
ENSORLG00020011427	-	78	45.122	ENSXMAG00000023078	-	99	44.058	Xiphophorus_maculatus
ENSORLG00020011427	-	99	47.180	ENSXMAG00000028309	-	100	47.180	Xiphophorus_maculatus
ENSORLG00020011427	-	90	46.134	ENSXMAG00000026588	-	99	46.134	Xiphophorus_maculatus
ENSORLG00020011427	-	99	47.419	ENSXMAG00000021070	-	100	47.419	Xiphophorus_maculatus
ENSORLG00020011427	-	61	39.712	ENSXMAG00000025430	-	99	39.712	Xiphophorus_maculatus