EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020011478 (Gene tree)
Gene ID: -
Gene Symbol: scrt2
Alias: -
Full Name: transcriptional repressor scratch 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 8571 bases
Position: chr7:21484671-21493241
Accession: 101172495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020010587	zf-C2H2	PF00096.26	4.3e-26	1	5
ENSORLP00020010587	zf-C2H2	PF00096.26	4.3e-26	2	5
ENSORLP00020010587	zf-C2H2	PF00096.26	4.3e-26	3	5
ENSORLP00020010587	zf-C2H2	PF00096.26	4.3e-26	4	5
ENSORLP00020010587	zf-C2H2	PF00096.26	4.3e-26	5	5
ENSORLP00020010587	zf-met	PF12874.7	6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020017260	-	5405	-	ENSORLP00020010587	319 (aa)	XP_004070917	H2MJN9

Gene Model

Click here to download ENSORLG00020011478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020011478	scrt2	50	37.984	ENSORLG00020007018	-	79	37.984
ENSORLG00020011478	scrt2	64	37.594	ENSORLG00020009943	-	90	42.857
ENSORLG00020011478	scrt2	61	39.098	ENSORLG00020010560	-	96	46.479
ENSORLG00020011478	scrt2	54	43.421	ENSORLG00020010250	-	84	45.205
ENSORLG00020011478	scrt2	50	42.308	ENSORLG00020017164	-	99	40.000
ENSORLG00020011478	scrt2	53	35.821	ENSORLG00020008484	-	92	35.821
ENSORLG00020011478	scrt2	97	64.725	ENSORLG00020012967	scrt1b	96	64.725
ENSORLG00020011478	scrt2	82	37.143	ENSORLG00020002128	-	90	37.143
ENSORLG00020011478	scrt2	53	38.849	ENSORLG00020000246	-	85	38.849
ENSORLG00020011478	scrt2	65	38.235	ENSORLG00020009419	-	93	38.739
ENSORLG00020011478	scrt2	56	39.286	ENSORLG00020018069	-	89	39.416
ENSORLG00020011478	scrt2	70	37.500	ENSORLG00020008744	-	61	34.868
ENSORLG00020011478	scrt2	60	37.121	ENSORLG00020011149	-	84	39.394
ENSORLG00020011478	scrt2	57	36.842	ENSORLG00020018051	prdm5	52	36.842
ENSORLG00020011478	scrt2	61	37.594	ENSORLG00020009184	-	90	37.594
ENSORLG00020011478	scrt2	70	35.664	ENSORLG00020000009	znf710b	58	35.664
ENSORLG00020011478	scrt2	50	42.593	ENSORLG00020008891	-	86	37.838
ENSORLG00020011478	scrt2	52	35.338	ENSORLG00020010020	-	81	35.338
ENSORLG00020011478	scrt2	75	39.869	ENSORLG00020009180	-	98	39.869
ENSORLG00020011478	scrt2	82	32.667	ENSORLG00020014595	PRDM15	55	32.667
ENSORLG00020011478	scrt2	60	38.235	ENSORLG00020008346	-	97	39.098
ENSORLG00020011478	scrt2	59	38.889	ENSORLG00020020419	-	87	38.889
ENSORLG00020011478	scrt2	96	37.705	ENSORLG00020008787	snai2	98	37.705
ENSORLG00020011478	scrt2	54	41.667	ENSORLG00020009857	-	97	41.667
ENSORLG00020011478	scrt2	60	41.221	ENSORLG00020010171	-	95	39.091
ENSORLG00020011478	scrt2	65	37.500	ENSORLG00020010953	-	96	37.500
ENSORLG00020011478	scrt2	53	35.955	ENSORLG00020009965	-	86	35.955
ENSORLG00020011478	scrt2	53	37.255	ENSORLG00020010038	-	65	37.255
ENSORLG00020011478	scrt2	52	38.346	ENSORLG00020008933	-	63	39.604
ENSORLG00020011478	scrt2	50	35.802	ENSORLG00020007967	-	85	42.574
ENSORLG00020011478	scrt2	50	50.000	ENSORLG00020010804	-	95	43.750
ENSORLG00020011478	scrt2	53	35.526	ENSORLG00020009089	-	58	35.526
ENSORLG00020011478	scrt2	59	37.500	ENSORLG00020000481	-	80	42.857
ENSORLG00020011478	scrt2	52	44.211	ENSORLG00020010880	-	75	44.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011478	scrt2	97	60.897	ENSAPOG00000015197	-	97	60.897	Acanthochromis_polyacanthus
ENSORLG00020011478	scrt2	97	65.049	ENSAPOG00000009279	scrt1b	96	65.049	Acanthochromis_polyacanthus
ENSORLG00020011478	scrt2	100	95.925	ENSAPOG00000003680	scrt2	100	95.925	Acanthochromis_polyacanthus
ENSORLG00020011478	scrt2	100	83.386	ENSACIG00000012604	scrt2	100	83.386	Amphilophus_citrinellus
ENSORLG00020011478	scrt2	97	63.107	ENSACIG00000013613	scrt1b	96	63.107	Amphilophus_citrinellus
ENSORLG00020011478	scrt2	97	60.502	ENSACIG00000006586	-	97	60.502	Amphilophus_citrinellus
ENSORLG00020011478	scrt2	100	63.580	ENSACIG00000001296	-	100	64.308	Amphilophus_citrinellus
ENSORLG00020011478	scrt2	100	95.925	ENSAOCG00000021557	scrt2	100	95.925	Amphiprion_ocellaris
ENSORLG00020011478	scrt2	97	65.049	ENSAOCG00000003910	scrt1b	96	65.049	Amphiprion_ocellaris
ENSORLG00020011478	scrt2	97	59.875	ENSAOCG00000023304	-	97	59.875	Amphiprion_ocellaris
ENSORLG00020011478	scrt2	100	95.925	ENSAPEG00000022558	scrt2	100	95.925	Amphiprion_percula
ENSORLG00020011478	scrt2	97	59.875	ENSAPEG00000005677	-	97	59.875	Amphiprion_percula
ENSORLG00020011478	scrt2	97	65.049	ENSAPEG00000000869	scrt1b	96	65.049	Amphiprion_percula
ENSORLG00020011478	scrt2	100	93.730	ENSATEG00000023998	scrt2	100	93.730	Anabas_testudineus
ENSORLG00020011478	scrt2	100	62.424	ENSATEG00000003195	-	100	62.424	Anabas_testudineus
ENSORLG00020011478	scrt2	97	65.696	ENSATEG00000002302	scrt1b	96	65.696	Anabas_testudineus
ENSORLG00020011478	scrt2	97	61.415	ENSATEG00000011660	-	97	61.415	Anabas_testudineus
ENSORLG00020011478	scrt2	74	70.213	ENSACAG00000016109	SCRT2	95	70.213	Anolis_carolinensis
ENSORLG00020011478	scrt2	97	60.062	ENSACLG00000012046	-	97	60.062	Astatotilapia_calliptera
ENSORLG00020011478	scrt2	97	64.725	ENSACLG00000007162	scrt1b	96	64.725	Astatotilapia_calliptera
ENSORLG00020011478	scrt2	97	63.782	ENSAMXG00000042624	SCRT1	98	63.782	Astyanax_mexicanus
ENSORLG00020011478	scrt2	89	77.895	ENSAMXG00000034158	scrt2	97	77.895	Astyanax_mexicanus
ENSORLG00020011478	scrt2	97	65.696	ENSAMXG00000038085	scrt1a	97	65.696	Astyanax_mexicanus
ENSORLG00020011478	scrt2	56	56.906	WBGene00000468	ces-1	59	55.249	Caenorhabditis_elegans
ENSORLG00020011478	scrt2	97	65.049	ENSCPBG00000018899	SCRT1	97	65.049	Chrysemys_picta_bellii
ENSORLG00020011478	scrt2	88	61.071	ENSCPBG00000027613	SCRT2	100	61.071	Chrysemys_picta_bellii
ENSORLG00020011478	scrt2	97	59.813	ENSCSEG00000014892	-	97	59.813	Cynoglossus_semilaevis
ENSORLG00020011478	scrt2	100	89.969	ENSCSEG00000021542	scrt2	100	89.969	Cynoglossus_semilaevis
ENSORLG00020011478	scrt2	97	64.725	ENSCSEG00000008596	scrt1b	96	64.725	Cynoglossus_semilaevis
ENSORLG00020011478	scrt2	100	96.238	ENSCVAG00000021038	scrt2	100	96.238	Cyprinodon_variegatus
ENSORLG00020011478	scrt2	97	64.725	ENSCVAG00000009561	scrt1b	96	64.725	Cyprinodon_variegatus
ENSORLG00020011478	scrt2	99	59.756	ENSCVAG00000003190	-	100	59.756	Cyprinodon_variegatus
ENSORLG00020011478	scrt2	97	66.667	ENSDARG00000040214	scrt1b	97	66.667	Danio_rerio
ENSORLG00020011478	scrt2	97	65.049	ENSDARG00000100821	scrt1a	97	65.049	Danio_rerio
ENSORLG00020011478	scrt2	100	86.196	ENSELUG00000023883	scrt2	100	87.423	Esox_lucius
ENSORLG00020011478	scrt2	97	66.234	ENSELUG00000022228	scrt1a	96	66.234	Esox_lucius
ENSORLG00020011478	scrt2	97	66.343	ENSELUG00000005435	scrt1b	96	66.343	Esox_lucius
ENSORLG00020011478	scrt2	80	64.865	ENSFALG00000005718	SCRT2	97	66.537	Ficedula_albicollis
ENSORLG00020011478	scrt2	97	60.188	ENSFHEG00000009794	-	97	60.188	Fundulus_heteroclitus
ENSORLG00020011478	scrt2	97	64.725	ENSFHEG00000014820	scrt1b	96	64.725	Fundulus_heteroclitus
ENSORLG00020011478	scrt2	100	84.953	ENSFHEG00000005732	scrt2	100	84.953	Fundulus_heteroclitus
ENSORLG00020011478	scrt2	96	64.935	ENSGMOG00000000629	scrt1b	96	64.935	Gadus_morhua
ENSORLG00020011478	scrt2	99	78.116	ENSGMOG00000019519	scrt2	99	78.116	Gadus_morhua
ENSORLG00020011478	scrt2	97	58.576	ENSGALG00000028912	SCRT2	97	60.194	Gallus_gallus
ENSORLG00020011478	scrt2	99	58.934	ENSGAFG00000009650	-	100	58.934	Gambusia_affinis
ENSORLG00020011478	scrt2	100	90.282	ENSGAFG00000003093	scrt2	100	90.282	Gambusia_affinis
ENSORLG00020011478	scrt2	97	64.725	ENSGAFG00000007636	scrt1b	96	64.725	Gambusia_affinis
ENSORLG00020011478	scrt2	97	59.688	ENSGACG00000004072	-	97	59.688	Gasterosteus_aculeatus
ENSORLG00020011478	scrt2	96	62.662	ENSGACG00000008982	scrt1b	96	62.662	Gasterosteus_aculeatus
ENSORLG00020011478	scrt2	66	72.986	ENSGAGG00000020760	-	74	72.986	Gopherus_agassizii
ENSORLG00020011478	scrt2	100	61.129	ENSGAGG00000020761	SCRT2	100	61.129	Gopherus_agassizii
ENSORLG00020011478	scrt2	97	64.725	ENSGAGG00000011736	SCRT1	98	64.725	Gopherus_agassizii
ENSORLG00020011478	scrt2	100	95.298	ENSHBUG00000012492	scrt2	100	95.298	Haplochromis_burtoni
ENSORLG00020011478	scrt2	97	64.725	ENSHBUG00000016621	scrt1b	96	64.725	Haplochromis_burtoni
ENSORLG00020011478	scrt2	97	60.188	ENSHBUG00000019101	-	97	60.188	Haplochromis_burtoni
ENSORLG00020011478	scrt2	97	65.049	ENSHCOG00000016704	scrt1b	96	65.049	Hippocampus_comes
ENSORLG00020011478	scrt2	100	84.688	ENSHCOG00000008116	scrt2	100	84.688	Hippocampus_comes
ENSORLG00020011478	scrt2	97	59.807	ENSHCOG00000016179	-	97	60.129	Hippocampus_comes
ENSORLG00020011478	scrt2	97	64.952	ENSIPUG00000004551	scrt1a	97	64.952	Ictalurus_punctatus
ENSORLG00020011478	scrt2	97	61.812	ENSIPUG00000005547	-	98	61.812	Ictalurus_punctatus
ENSORLG00020011478	scrt2	97	60.502	ENSKMAG00000009489	-	97	60.502	Kryptolebias_marmoratus
ENSORLG00020011478	scrt2	97	64.725	ENSKMAG00000005484	scrt1b	96	64.725	Kryptolebias_marmoratus
ENSORLG00020011478	scrt2	100	95.298	ENSKMAG00000018087	scrt2	100	95.298	Kryptolebias_marmoratus
ENSORLG00020011478	scrt2	100	94.375	ENSLBEG00000015419	scrt2	100	94.375	Labrus_bergylta
ENSORLG00020011478	scrt2	97	58.621	ENSLBEG00000023388	-	97	59.561	Labrus_bergylta
ENSORLG00020011478	scrt2	97	67.314	ENSLACG00000003588	SCRT1	96	67.314	Latimeria_chalumnae
ENSORLG00020011478	scrt2	100	65.432	ENSLOCG00000002246	scrt2	100	65.741	Lepisosteus_oculatus
ENSORLG00020011478	scrt2	97	68.285	ENSLOCG00000007573	scrt1b	97	68.285	Lepisosteus_oculatus
ENSORLG00020011478	scrt2	100	94.984	ENSMAMG00000001291	scrt2	100	94.984	Mastacembelus_armatus
ENSORLG00020011478	scrt2	97	65.049	ENSMAMG00000011698	scrt1b	96	65.049	Mastacembelus_armatus
ENSORLG00020011478	scrt2	97	60.188	ENSMZEG00005026702	-	97	60.188	Maylandia_zebra
ENSORLG00020011478	scrt2	97	64.725	ENSMZEG00005005627	scrt1b	96	64.725	Maylandia_zebra
ENSORLG00020011478	scrt2	100	95.298	ENSMZEG00005026445	scrt2	100	95.298	Maylandia_zebra
ENSORLG00020011478	scrt2	80	65.625	ENSMGAG00000016579	SCRT2	97	66.406	Meleagris_gallopavo
ENSORLG00020011478	scrt2	97	64.401	ENSMMOG00000003327	scrt1b	96	64.401	Mola_mola
ENSORLG00020011478	scrt2	97	60.000	ENSMMOG00000018345	-	97	60.000	Mola_mola
ENSORLG00020011478	scrt2	99	93.396	ENSMMOG00000009272	scrt2	99	93.711	Mola_mola
ENSORLG00020011478	scrt2	97	65.372	ENSMALG00000012704	scrt1b	96	65.372	Monopterus_albus
ENSORLG00020011478	scrt2	100	78.683	ENSMALG00000013656	scrt2	100	78.683	Monopterus_albus
ENSORLG00020011478	scrt2	50	78.616	ENSNGAG00000020815	Scrt2	82	75.000	Nannospalax_galili
ENSORLG00020011478	scrt2	100	83.072	ENSNBRG00000007221	scrt2	100	83.072	Neolamprologus_brichardi
ENSORLG00020011478	scrt2	97	60.188	ENSNBRG00000014882	-	97	60.188	Neolamprologus_brichardi
ENSORLG00020011478	scrt2	97	65.049	ENSNBRG00000013983	scrt1b	96	65.049	Neolamprologus_brichardi
ENSORLG00020011478	scrt2	100	95.611	ENSONIG00000016758	scrt2	100	95.611	Oreochromis_niloticus
ENSORLG00020011478	scrt2	97	60.559	ENSONIG00000019809	-	100	60.559	Oreochromis_niloticus
ENSORLG00020011478	scrt2	97	64.725	ENSONIG00000006007	scrt1b	100	64.286	Oreochromis_niloticus
ENSORLG00020011478	scrt2	100	62.538	ENSONIG00000003152	-	100	62.069	Oreochromis_niloticus
ENSORLG00020011478	scrt2	100	100.000	ENSORLG00000024051	scrt2	100	100.000	Oryzias_latipes
ENSORLG00020011478	scrt2	97	64.725	ENSORLG00000025651	scrt1b	96	64.725	Oryzias_latipes
ENSORLG00020011478	scrt2	97	58.514	ENSORLG00000022825	-	97	58.514	Oryzias_latipes
ENSORLG00020011478	scrt2	97	64.725	ENSORLG00015019165	scrt1b	96	64.725	Oryzias_latipes_hsok
ENSORLG00020011478	scrt2	97	58.514	ENSORLG00015010104	-	97	58.514	Oryzias_latipes_hsok
ENSORLG00020011478	scrt2	100	100.000	ENSORLG00015005524	scrt2	100	100.000	Oryzias_latipes_hsok
ENSORLG00020011478	scrt2	97	64.725	ENSOMEG00000003925	scrt1b	96	64.725	Oryzias_melastigma
ENSORLG00020011478	scrt2	100	98.119	ENSOMEG00000002661	scrt2	100	98.119	Oryzias_melastigma
ENSORLG00020011478	scrt2	97	60.000	ENSOMEG00000000286	-	97	60.000	Oryzias_melastigma
ENSORLG00020011478	scrt2	97	66.667	ENSPKIG00000022303	SCRT1	97	66.667	Paramormyrops_kingsleyae
ENSORLG00020011478	scrt2	97	66.667	ENSPKIG00000020085	scrt1a	97	66.667	Paramormyrops_kingsleyae
ENSORLG00020011478	scrt2	100	77.812	ENSPMGG00000016561	scrt2	100	77.812	Periophthalmus_magnuspinnatus
ENSORLG00020011478	scrt2	97	59.306	ENSPMGG00000021402	-	97	59.306	Periophthalmus_magnuspinnatus
ENSORLG00020011478	scrt2	97	63.961	ENSPMGG00000002260	scrt1b	96	63.961	Periophthalmus_magnuspinnatus
ENSORLG00020011478	scrt2	97	64.725	ENSPFOG00000017719	scrt1b	96	64.725	Poecilia_formosa
ENSORLG00020011478	scrt2	99	59.357	ENSPFOG00000005616	-	100	59.357	Poecilia_formosa
ENSORLG00020011478	scrt2	100	96.552	ENSPFOG00000007738	scrt2	100	96.552	Poecilia_formosa
ENSORLG00020011478	scrt2	99	59.146	ENSPLAG00000011718	-	100	59.146	Poecilia_latipinna
ENSORLG00020011478	scrt2	100	86.834	ENSPLAG00000005765	scrt2	100	86.834	Poecilia_latipinna
ENSORLG00020011478	scrt2	97	64.725	ENSPLAG00000009876	scrt1b	96	64.725	Poecilia_latipinna
ENSORLG00020011478	scrt2	99	59.146	ENSPMEG00000011706	-	100	59.146	Poecilia_mexicana
ENSORLG00020011478	scrt2	97	64.725	ENSPMEG00000013274	scrt1b	96	64.725	Poecilia_mexicana
ENSORLG00020011478	scrt2	100	86.834	ENSPMEG00000001538	scrt2	100	86.834	Poecilia_mexicana
ENSORLG00020011478	scrt2	100	96.238	ENSPREG00000001147	scrt2	100	96.238	Poecilia_reticulata
ENSORLG00020011478	scrt2	99	58.788	ENSPREG00000012166	-	100	58.788	Poecilia_reticulata
ENSORLG00020011478	scrt2	97	64.725	ENSPREG00000018985	scrt1b	96	64.725	Poecilia_reticulata
ENSORLG00020011478	scrt2	97	60.188	ENSPNYG00000008865	-	97	60.188	Pundamilia_nyererei
ENSORLG00020011478	scrt2	97	64.725	ENSPNYG00000017733	scrt1b	96	64.725	Pundamilia_nyererei
ENSORLG00020011478	scrt2	100	83.072	ENSPNYG00000013109	scrt2	100	83.072	Pundamilia_nyererei
ENSORLG00020011478	scrt2	97	66.343	ENSPNAG00000017415	scrt1a	97	66.343	Pygocentrus_nattereri
ENSORLG00020011478	scrt2	97	63.548	ENSPNAG00000027880	-	98	63.871	Pygocentrus_nattereri
ENSORLG00020011478	scrt2	97	65.372	ENSSFOG00015001195	SCRT1	97	65.372	Scleropages_formosus
ENSORLG00020011478	scrt2	97	58.514	ENSSMAG00000005122	-	97	58.514	Scophthalmus_maximus
ENSORLG00020011478	scrt2	97	64.401	ENSSMAG00000019207	scrt1b	96	64.401	Scophthalmus_maximus
ENSORLG00020011478	scrt2	97	60.188	ENSSDUG00000013215	-	97	60.188	Seriola_dumerili
ENSORLG00020011478	scrt2	97	65.372	ENSSDUG00000007752	scrt1b	96	65.372	Seriola_dumerili
ENSORLG00020011478	scrt2	97	90.260	ENSSDUG00000001637	scrt2	95	90.260	Seriola_dumerili
ENSORLG00020011478	scrt2	100	95.298	ENSSLDG00000013565	scrt2	100	95.298	Seriola_lalandi_dorsalis
ENSORLG00020011478	scrt2	97	65.372	ENSSLDG00000017166	scrt1b	96	65.372	Seriola_lalandi_dorsalis
ENSORLG00020011478	scrt2	97	60.188	ENSSLDG00000016454	-	97	60.188	Seriola_lalandi_dorsalis
ENSORLG00020011478	scrt2	97	62.903	ENSSPUG00000018637	SCRT2	97	62.903	Sphenodon_punctatus
ENSORLG00020011478	scrt2	97	65.372	ENSSPAG00000002200	scrt1b	96	65.372	Stegastes_partitus
ENSORLG00020011478	scrt2	97	60.188	ENSSPAG00000006788	-	97	60.188	Stegastes_partitus
ENSORLG00020011478	scrt2	100	84.013	ENSSPAG00000014018	scrt2	100	84.013	Stegastes_partitus
ENSORLG00020011478	scrt2	80	64.729	ENSTGUG00000006801	SCRT2	99	66.406	Taeniopygia_guttata
ENSORLG00020011478	scrt2	96	63.636	ENSTRUG00000011637	scrt1b	97	63.636	Takifugu_rubripes
ENSORLG00020011478	scrt2	97	60.502	ENSTRUG00000012719	-	97	60.815	Takifugu_rubripes
ENSORLG00020011478	scrt2	99	87.421	ENSTRUG00000007620	scrt2	99	87.421	Takifugu_rubripes
ENSORLG00020011478	scrt2	81	63.813	ENSTRUG00000019558	-	79	64.202	Takifugu_rubripes
ENSORLG00020011478	scrt2	99	91.509	ENSTNIG00000012473	scrt2	99	91.509	Tetraodon_nigroviridis
ENSORLG00020011478	scrt2	96	64.286	ENSTNIG00000018384	scrt1b	96	64.286	Tetraodon_nigroviridis
ENSORLG00020011478	scrt2	99	58.514	ENSXCOG00000019861	-	100	58.514	Xiphophorus_couchianus
ENSORLG00020011478	scrt2	97	64.725	ENSXCOG00000019675	scrt1b	96	64.725	Xiphophorus_couchianus
ENSORLG00020011478	scrt2	100	89.969	ENSXCOG00000014367	scrt2	100	89.969	Xiphophorus_couchianus
ENSORLG00020011478	scrt2	100	95.925	ENSXMAG00000028567	scrt2	100	95.925	Xiphophorus_maculatus
ENSORLG00020011478	scrt2	97	64.725	ENSXMAG00000027885	scrt1b	96	64.725	Xiphophorus_maculatus
ENSORLG00020011478	scrt2	99	58.841	ENSXMAG00000015353	-	100	58.841	Xiphophorus_maculatus