EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020011483 (Gene tree)
Gene ID: -
Gene Symbol: pus1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 2382 bases
Position: chr12:15369382-15371763
Accession: 101161660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028165	PseudoU_synth_1	PF01416.20	8.5e-15	1	1
ENSORLP00020010573	PseudoU_synth_1	PF01416.20	8.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020017243	-	1812	XM_004074847	ENSORLP00020010573	416 (aa)	XP_004074895	-
ENSORLT00020017261	-	1891	-	ENSORLP00020028165	419 (aa)	-	-

Gene Model

Click here to download ENSORLG00020011483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011483	pus1	84	70.286	ENSG00000177192	PUS1	85	72.948	Homo_sapiens
ENSORLG00020011483	pus1	100	80.806	ENSAPOG00000007254	pus1	100	80.806	Acanthochromis_polyacanthus
ENSORLG00020011483	pus1	88	67.213	ENSAMEG00000013715	PUS1	87	67.213	Ailuropoda_melanoleuca
ENSORLG00020011483	pus1	97	79.506	ENSACIG00000009169	pus1	97	79.506	Amphilophus_citrinellus
ENSORLG00020011483	pus1	100	81.043	ENSAOCG00000022207	pus1	100	81.043	Amphiprion_ocellaris
ENSORLG00020011483	pus1	100	80.806	ENSAPEG00000006039	pus1	100	83.673	Amphiprion_percula
ENSORLG00020011483	pus1	93	82.821	ENSATEG00000020688	pus1	99	82.821	Anabas_testudineus
ENSORLG00020011483	pus1	81	71.765	ENSACAG00000007367	PUS1	91	71.765	Anolis_carolinensis
ENSORLG00020011483	pus1	78	70.062	ENSANAG00000036192	PUS1	99	70.062	Aotus_nancymaae
ENSORLG00020011483	pus1	100	78.910	ENSACLG00000020868	pus1	99	81.282	Astatotilapia_calliptera
ENSORLG00020011483	pus1	99	68.916	ENSAMXG00000008710	pus1	94	68.916	Astyanax_mexicanus
ENSORLG00020011483	pus1	83	70.231	ENSBTAG00000012990	PUS1	83	72.289	Bos_taurus
ENSORLG00020011483	pus1	78	39.826	WBGene00004248	pus-1	81	39.826	Caenorhabditis_elegans
ENSORLG00020011483	pus1	61	70.472	ENSCJAG00000003720	PUS1	70	70.543	Callithrix_jacchus
ENSORLG00020011483	pus1	85	68.927	ENSCAFG00000006429	PUS1	83	72.072	Canis_familiaris
ENSORLG00020011483	pus1	80	72.072	ENSCAFG00020010737	PUS1	77	72.072	Canis_lupus_dingo
ENSORLG00020011483	pus1	83	70.520	ENSCHIG00000000487	PUS1	83	72.590	Capra_hircus
ENSORLG00020011483	pus1	84	70.571	ENSTSYG00000032605	PUS1	94	71.143	Carlito_syrichta
ENSORLG00020011483	pus1	72	72.910	ENSCAPG00000006421	PUS1	94	72.937	Cavia_aperea
ENSORLG00020011483	pus1	93	64.175	ENSCPOG00000001027	PUS1	92	64.286	Cavia_porcellus
ENSORLG00020011483	pus1	78	72.308	ENSCCAG00000015879	PUS1	90	69.325	Cebus_capucinus
ENSORLG00020011483	pus1	81	71.513	ENSCATG00000032870	PUS1	83	72.787	Cercocebus_atys
ENSORLG00020011483	pus1	79	71.646	ENSCLAG00000011689	PUS1	84	67.697	Chinchilla_lanigera
ENSORLG00020011483	pus1	81	71.810	ENSCSAG00000001879	PUS1	79	71.810	Chlorocebus_sabaeus
ENSORLG00020011483	pus1	76	71.429	ENSCPBG00000024715	PUS1	89	71.429	Chrysemys_picta_bellii
ENSORLG00020011483	pus1	82	43.732	ENSCING00000009426	-	91	43.732	Ciona_intestinalis
ENSORLG00020011483	pus1	84	41.761	ENSCSAVG00000003751	-	72	41.761	Ciona_savignyi
ENSORLG00020011483	pus1	84	61.714	ENSCANG00000035561	PUS1	89	63.222	Colobus_angolensis_palliatus
ENSORLG00020011483	pus1	81	72.861	ENSCGRG00001019592	Pus1	80	72.861	Cricetulus_griseus_chok1gshd
ENSORLG00020011483	pus1	81	72.861	ENSCGRG00000004048	Pus1	86	72.861	Cricetulus_griseus_crigri
ENSORLG00020011483	pus1	100	75.118	ENSCSEG00000003629	pus1	100	75.118	Cynoglossus_semilaevis
ENSORLG00020011483	pus1	100	81.190	ENSCVAG00000001265	pus1	100	81.190	Cyprinodon_variegatus
ENSORLG00020011483	pus1	92	69.974	ENSDARG00000045562	pus1	96	77.407	Danio_rerio
ENSORLG00020011483	pus1	82	69.767	ENSDNOG00000045576	PUS1	94	71.895	Dasypus_novemcinctus
ENSORLG00020011483	pus1	78	70.552	ENSDORG00000011455	Pus1	99	70.552	Dipodomys_ordii
ENSORLG00020011483	pus1	76	48.910	FBgn0038811	PUS1	77	48.910	Drosophila_melanogaster
ENSORLG00020011483	pus1	81	71.045	ENSETEG00000019160	PUS1	83	70.796	Echinops_telfairi
ENSORLG00020011483	pus1	83	43.597	ENSEBUG00000000368	-	69	42.895	Eptatretus_burgeri
ENSORLG00020011483	pus1	92	65.445	ENSEASG00005016535	PUS1	86	65.445	Equus_asinus_asinus
ENSORLG00020011483	pus1	80	72.072	ENSECAG00000006965	PUS1	83	72.072	Equus_caballus
ENSORLG00020011483	pus1	96	71.078	ENSELUG00000010424	pus1	96	74.868	Esox_lucius
ENSORLG00020011483	pus1	50	30.802	ENSFCAG00000007617	PUSL1	77	30.802	Felis_catus
ENSORLG00020011483	pus1	79	72.727	ENSFCAG00000010780	PUS1	78	72.727	Felis_catus
ENSORLG00020011483	pus1	86	70.442	ENSFALG00000008273	PUS1	85	70.442	Ficedula_albicollis
ENSORLG00020011483	pus1	85	69.296	ENSFDAG00000012518	PUS1	85	69.296	Fukomys_damarensis
ENSORLG00020011483	pus1	100	80.952	ENSFHEG00000010504	pus1	100	80.952	Fundulus_heteroclitus
ENSORLG00020011483	pus1	94	73.282	ENSGMOG00000008143	pus1	99	73.282	Gadus_morhua
ENSORLG00020011483	pus1	93	68.041	ENSGALG00000002354	PUS1	91	68.041	Gallus_gallus
ENSORLG00020011483	pus1	100	80.952	ENSGAFG00000006578	pus1	100	80.952	Gambusia_affinis
ENSORLG00020011483	pus1	100	76.540	ENSGACG00000017566	pus1	100	79.592	Gasterosteus_aculeatus
ENSORLG00020011483	pus1	76	70.159	ENSGAGG00000016730	-	91	69.716	Gopherus_agassizii
ENSORLG00020011483	pus1	84	70.571	ENSGGOG00000009178	PUS1	87	70.859	Gorilla_gorilla
ENSORLG00020011483	pus1	100	79.384	ENSHBUG00000001316	pus1	99	81.795	Haplochromis_burtoni
ENSORLG00020011483	pus1	84	67.143	ENSHGLG00000016086	PUS1	89	67.143	Heterocephalus_glaber_female
ENSORLG00020011483	pus1	84	66.857	ENSHGLG00100019362	PUS1	89	66.857	Heterocephalus_glaber_male
ENSORLG00020011483	pus1	100	74.524	ENSHCOG00000014288	pus1	96	74.524	Hippocampus_comes
ENSORLG00020011483	pus1	100	69.070	ENSIPUG00000010387	pus1	100	69.070	Ictalurus_punctatus
ENSORLG00020011483	pus1	83	71.098	ENSSTOG00000011245	PUS1	81	71.098	Ictidomys_tridecemlineatus
ENSORLG00020011483	pus1	80	73.414	ENSJJAG00000000088	Pus1	78	73.414	Jaculus_jaculus
ENSORLG00020011483	pus1	100	74.822	ENSKMAG00000012702	pus1	100	74.822	Kryptolebias_marmoratus
ENSORLG00020011483	pus1	96	76.179	ENSLBEG00000002845	pus1	98	76.179	Labrus_bergylta
ENSORLG00020011483	pus1	77	57.764	ENSLACG00000016044	-	97	57.764	Latimeria_chalumnae
ENSORLG00020011483	pus1	86	69.359	ENSLACG00000018598	PUS1	94	66.844	Latimeria_chalumnae
ENSORLG00020011483	pus1	90	69.430	ENSLOCG00000006127	pus1	96	69.430	Lepisosteus_oculatus
ENSORLG00020011483	pus1	84	68.946	ENSLAFG00000028731	PUS1	94	68.946	Loxodonta_africana
ENSORLG00020011483	pus1	78	73.231	ENSMFAG00000041194	PUS1	83	73.115	Macaca_fascicularis
ENSORLG00020011483	pus1	81	71.810	ENSMMUG00000031463	PUS1	87	73.115	Macaca_mulatta
ENSORLG00020011483	pus1	81	71.810	ENSMNEG00000002814	PUS1	83	73.115	Macaca_nemestrina
ENSORLG00020011483	pus1	73	73.267	ENSMLEG00000043560	PUS1	93	73.267	Mandrillus_leucophaeus
ENSORLG00020011483	pus1	100	79.858	ENSMAMG00000007371	pus1	100	79.858	Mastacembelus_armatus
ENSORLG00020011483	pus1	100	78.910	ENSMZEG00005017746	pus1	100	78.910	Maylandia_zebra
ENSORLG00020011483	pus1	78	73.375	ENSMGAG00000001958	PUS1	98	73.375	Meleagris_gallopavo
ENSORLG00020011483	pus1	60	31.179	ENSMGAG00000000851	PUS3	63	31.179	Meleagris_gallopavo
ENSORLG00020011483	pus1	81	72.861	ENSMAUG00000001482	Pus1	80	72.861	Mesocricetus_auratus
ENSORLG00020011483	pus1	83	70.930	ENSMICG00000030980	PUS1	90	68.392	Microcebus_murinus
ENSORLG00020011483	pus1	81	72.861	ENSMOCG00000022311	Pus1	80	72.861	Microtus_ochrogaster
ENSORLG00020011483	pus1	91	79.310	ENSMMOG00000021022	pus1	97	79.310	Mola_mola
ENSORLG00020011483	pus1	82	68.222	ENSMODG00000015551	PUS1	82	66.120	Monodelphis_domestica
ENSORLG00020011483	pus1	99	77.672	ENSMALG00000013202	pus1	99	77.938	Monopterus_albus
ENSORLG00020011483	pus1	88	68.564	MGP_CAROLIEiJ_G0027551	Pus1	88	71.676	Mus_caroli
ENSORLG00020011483	pus1	85	70.538	ENSMUSG00000029507	Pus1	88	71.676	Mus_musculus
ENSORLG00020011483	pus1	85	70.391	MGP_PahariEiJ_G0024133	Pus1	88	71.676	Mus_pahari
ENSORLG00020011483	pus1	85	70.538	MGP_SPRETEiJ_G0028549	Pus1	88	71.676	Mus_spretus
ENSORLG00020011483	pus1	79	73.252	ENSMPUG00000002314	PUS1	83	73.252	Mustela_putorius_furo
ENSORLG00020011483	pus1	87	66.944	ENSMLUG00000015790	PUS1	95	68.571	Myotis_lucifugus
ENSORLG00020011483	pus1	79	74.772	ENSNGAG00000012976	Pus1	78	74.772	Nannospalax_galili
ENSORLG00020011483	pus1	93	81.538	ENSNBRG00000020502	pus1	99	82.133	Neolamprologus_brichardi
ENSORLG00020011483	pus1	84	68.286	ENSNLEG00000008505	PUS1	99	70.476	Nomascus_leucogenys
ENSORLG00020011483	pus1	84	62.178	ENSMEUG00000002825	PUS1	93	62.178	Notamacropus_eugenii
ENSORLG00020011483	pus1	79	63.609	ENSOPRG00000002701	-	86	63.609	Ochotona_princeps
ENSORLG00020011483	pus1	80	72.289	ENSODEG00000008248	PUS1	87	72.289	Octodon_degus
ENSORLG00020011483	pus1	93	80.506	ENSONIG00000003803	pus1	99	80.506	Oreochromis_niloticus
ENSORLG00020011483	pus1	83	69.540	ENSOANG00000010619	PUS1	83	67.123	Ornithorhynchus_anatinus
ENSORLG00020011483	pus1	87	67.590	ENSOCUG00000007310	PUS1	79	67.397	Oryctolagus_cuniculus
ENSORLG00020011483	pus1	100	98.798	ENSORLG00000010787	pus1	100	98.798	Oryzias_latipes
ENSORLG00020011483	pus1	100	99.279	ENSORLG00015023012	pus1	100	99.279	Oryzias_latipes_hsok
ENSORLG00020011483	pus1	100	90.307	ENSOMEG00000022655	pus1	99	90.307	Oryzias_melastigma
ENSORLG00020011483	pus1	88	67.575	ENSOGAG00000008720	PUS1	95	68.120	Otolemur_garnettii
ENSORLG00020011483	pus1	83	70.231	ENSOARG00000013316	PUS1	79	70.231	Ovis_aries
ENSORLG00020011483	pus1	84	70.571	ENSPPAG00000040971	PUS1	87	70.859	Pan_paniscus
ENSORLG00020011483	pus1	79	72.727	ENSPPRG00000015456	PUS1	84	72.727	Panthera_pardus
ENSORLG00020011483	pus1	78	72.699	ENSPTIG00000004201	PUS1	86	72.727	Panthera_tigris_altaica
ENSORLG00020011483	pus1	84	70.286	ENSPTRG00000005643	PUS1	87	70.552	Pan_troglodytes
ENSORLG00020011483	pus1	81	71.726	ENSPANG00000000376	PUS1	83	73.026	Papio_anubis
ENSORLG00020011483	pus1	85	69.081	ENSPKIG00000019369	pus1	87	65.385	Paramormyrops_kingsleyae
ENSORLG00020011483	pus1	91	65.526	ENSPSIG00000016432	PUS1	94	62.963	Pelodiscus_sinensis
ENSORLG00020011483	pus1	93	75.258	ENSPMGG00000004522	pus1	99	75.781	Periophthalmus_magnuspinnatus
ENSORLG00020011483	pus1	81	73.156	ENSPEMG00000013448	Pus1	80	73.156	Peromyscus_maniculatus_bairdii
ENSORLG00020011483	pus1	79	59.517	ENSPMAG00000004636	pus1	99	59.517	Petromyzon_marinus
ENSORLG00020011483	pus1	72	60.797	ENSPCIG00000022609	-	73	59.935	Phascolarctos_cinereus
ENSORLG00020011483	pus1	100	80.000	ENSPFOG00000019669	pus1	100	80.000	Poecilia_formosa
ENSORLG00020011483	pus1	100	79.762	ENSPLAG00000007185	pus1	100	79.762	Poecilia_latipinna
ENSORLG00020011483	pus1	100	79.762	ENSPLAG00000002692	-	100	79.762	Poecilia_latipinna
ENSORLG00020011483	pus1	100	79.762	ENSPMEG00000011115	PUS1	100	79.762	Poecilia_mexicana
ENSORLG00020011483	pus1	98	80.049	ENSPMEG00000006038	pus1	98	82.071	Poecilia_mexicana
ENSORLG00020011483	pus1	95	81.980	ENSPREG00000007231	pus1	99	83.565	Poecilia_reticulata
ENSORLG00020011483	pus1	84	69.714	ENSPPYG00000005132	PUS1	82	69.714	Pongo_abelii
ENSORLG00020011483	pus1	64	66.165	ENSPCAG00000009110	-	65	66.165	Procavia_capensis
ENSORLG00020011483	pus1	83	61.919	ENSPCOG00000015595	PUS1	90	60.763	Propithecus_coquereli
ENSORLG00020011483	pus1	100	78.910	ENSPNYG00000013571	pus1	100	78.910	Pundamilia_nyererei
ENSORLG00020011483	pus1	91	74.271	ENSPNAG00000003938	pus1	88	74.271	Pygocentrus_nattereri
ENSORLG00020011483	pus1	85	70.255	ENSRNOG00000037500	Pus1	83	70.255	Rattus_norvegicus
ENSORLG00020011483	pus1	84	70.286	ENSRBIG00000043177	PUS1	90	70.552	Rhinopithecus_bieti
ENSORLG00020011483	pus1	84	70.286	ENSRROG00000039744	PUS1	88	69.868	Rhinopithecus_roxellana
ENSORLG00020011483	pus1	78	46.667	YPL212C	-	59	46.667	Saccharomyces_cerevisiae
ENSORLG00020011483	pus1	84	69.714	ENSSBOG00000023593	PUS1	92	69.659	Saimiri_boliviensis_boliviensis
ENSORLG00020011483	pus1	88	66.757	ENSSHAG00000013193	PUS1	89	66.757	Sarcophilus_harrisii
ENSORLG00020011483	pus1	86	73.056	ENSSFOG00015003463	pus1	84	71.698	Scleropages_formosus
ENSORLG00020011483	pus1	100	76.777	ENSSMAG00000019075	pus1	100	76.777	Scophthalmus_maximus
ENSORLG00020011483	pus1	100	79.858	ENSSDUG00000007102	pus1	100	79.858	Seriola_dumerili
ENSORLG00020011483	pus1	100	79.621	ENSSLDG00000022850	pus1	100	79.621	Seriola_lalandi_dorsalis
ENSORLG00020011483	pus1	73	62.046	ENSSARG00000008367	PUS1	98	62.046	Sorex_araneus
ENSORLG00020011483	pus1	88	67.568	ENSSPUG00000010009	PUS1	91	67.568	Sphenodon_punctatus
ENSORLG00020011483	pus1	94	82.908	ENSSPAG00000006272	pus1	100	82.908	Stegastes_partitus
ENSORLG00020011483	pus1	92	66.150	ENSSSCG00000009741	PUS1	93	66.150	Sus_scrofa
ENSORLG00020011483	pus1	79	74.545	ENSTGUG00000008068	PUS1	99	75.229	Taeniopygia_guttata
ENSORLG00020011483	pus1	88	79.235	ENSTRUG00000002198	pus1	91	81.127	Takifugu_rubripes
ENSORLG00020011483	pus1	90	76.064	ENSTNIG00000003942	pus1	94	76.800	Tetraodon_nigroviridis
ENSORLG00020011483	pus1	95	62.469	ENSTTRG00000000632	PUS1	95	62.469	Tursiops_truncatus
ENSORLG00020011483	pus1	85	68.908	ENSUAMG00000017197	PUS1	90	68.908	Ursus_americanus
ENSORLG00020011483	pus1	94	63.939	ENSUMAG00000002831	PUS1	94	73.248	Ursus_maritimus
ENSORLG00020011483	pus1	79	72.424	ENSVVUG00000004199	PUS1	75	72.424	Vulpes_vulpes
ENSORLG00020011483	pus1	77	50.000	ENSXETG00000033640	-	99	50.000	Xenopus_tropicalis
ENSORLG00020011483	pus1	83	67.919	ENSXETG00000002030	pus1	86	67.919	Xenopus_tropicalis
ENSORLG00020011483	pus1	95	84.343	ENSXCOG00000004722	pus1	98	85.185	Xiphophorus_couchianus
ENSORLG00020011483	pus1	100	81.667	ENSXMAG00000000988	pus1	100	81.667	Xiphophorus_maculatus