EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020011512 (Gene tree)
Gene ID: -
Gene Symbol: rnf113a
Alias: -
Full Name: ring finger protein 113A
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 4705 bases
Position: chr8:3742424-3747128
Accession: ZDB-GENE-040825-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020010566	zf-CCCH	PF00642.24	1.1e-08	1	1
ENSORLP00020010575	zf-CCCH	PF00642.24	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020017251	-	3491	-	ENSORLP00020010575	320 (aa)	-	-
ENSORLT00020017228	-	930	-	ENSORLP00020010566	309 (aa)	-	-

Gene Model

Click here to download ENSORLG00020011512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011512's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011512	rnf113a	95	58.958	ENSG00000139797	RNF113B	94	58.958	Homo_sapiens
ENSORLG00020011512	rnf113a	97	70.440	ENSG00000125352	RNF113A	93	71.069	Homo_sapiens
ENSORLG00020011512	rnf113a	100	88.474	ENSAPOG00000017510	rnf113a	99	88.474	Acanthochromis_polyacanthus
ENSORLG00020011512	rnf113a	97	68.210	ENSAMEG00000019845	-	93	69.753	Ailuropoda_melanoleuca
ENSORLG00020011512	rnf113a	100	79.677	ENSACIG00000007458	rnf113a	99	79.677	Amphilophus_citrinellus
ENSORLG00020011512	rnf113a	100	87.850	ENSAOCG00000003485	rnf113a	99	87.850	Amphiprion_ocellaris
ENSORLG00020011512	rnf113a	100	87.850	ENSAPEG00000001084	rnf113a	99	87.850	Amphiprion_percula
ENSORLG00020011512	rnf113a	100	89.375	ENSATEG00000022950	rnf113a	99	89.375	Anabas_testudineus
ENSORLG00020011512	rnf113a	79	86.939	ENSAPLG00000012510	-	97	82.197	Anas_platyrhynchos
ENSORLG00020011512	rnf113a	90	78.157	ENSACAG00000012485	-	94	78.498	Anolis_carolinensis
ENSORLG00020011512	rnf113a	96	68.868	ENSANAG00000024332	-	95	71.069	Aotus_nancymaae
ENSORLG00020011512	rnf113a	95	59.804	ENSANAG00000020431	RNF113B	94	59.804	Aotus_nancymaae
ENSORLG00020011512	rnf113a	94	70.130	ENSANAG00000013925	-	91	71.753	Aotus_nancymaae
ENSORLG00020011512	rnf113a	100	87.539	ENSACLG00000025256	rnf113a	99	87.539	Astatotilapia_calliptera
ENSORLG00020011512	rnf113a	100	85.981	ENSAMXG00000011273	rnf113a	99	85.981	Astyanax_mexicanus
ENSORLG00020011512	rnf113a	95	69.872	ENSBTAG00000006034	RNF113A	91	71.474	Bos_taurus
ENSORLG00020011512	rnf113a	97	62.883	ENSBTAG00000008684	-	93	63.804	Bos_taurus
ENSORLG00020011512	rnf113a	92	48.675	WBGene00010476	rnf-113	79	48.544	Caenorhabditis_elegans
ENSORLG00020011512	rnf113a	94	70.096	ENSCJAG00000022327	RNF113A	91	71.704	Callithrix_jacchus
ENSORLG00020011512	rnf113a	95	61.111	ENSCJAG00000004501	RNF113B	94	62.092	Callithrix_jacchus
ENSORLG00020011512	rnf113a	97	68.421	ENSCAFG00000018430	-	93	69.659	Canis_familiaris
ENSORLG00020011512	rnf113a	97	59.202	ENSCAFG00000018373	-	93	60.429	Canis_familiaris
ENSORLG00020011512	rnf113a	97	59.077	ENSCAFG00020020280	-	93	60.615	Canis_lupus_dingo
ENSORLG00020011512	rnf113a	97	68.421	ENSCAFG00020004044	-	93	69.659	Canis_lupus_dingo
ENSORLG00020011512	rnf113a	97	68.868	ENSCHIG00000018820	-	93	70.440	Capra_hircus
ENSORLG00020011512	rnf113a	97	65.397	ENSCHIG00000015616	-	93	65.397	Capra_hircus
ENSORLG00020011512	rnf113a	97	69.279	ENSTSYG00000001308	RNF113A	93	71.787	Carlito_syrichta
ENSORLG00020011512	rnf113a	97	71.203	ENSCPOG00000038517	-	94	71.924	Cavia_porcellus
ENSORLG00020011512	rnf113a	95	61.111	ENSCCAG00000021327	RNF113B	94	62.092	Cebus_capucinus
ENSORLG00020011512	rnf113a	97	69.811	ENSCCAG00000013617	RNF113A	93	71.384	Cebus_capucinus
ENSORLG00020011512	rnf113a	94	71.383	ENSCATG00000002702	RNF113A	90	72.026	Cercocebus_atys
ENSORLG00020011512	rnf113a	99	69.277	ENSCLAG00000017479	-	93	70.717	Chinchilla_lanigera
ENSORLG00020011512	rnf113a	95	59.935	ENSCSAG00000000222	RNF113B	90	60.261	Chlorocebus_sabaeus
ENSORLG00020011512	rnf113a	94	63.399	ENSCSAG00000019472	-	90	63.934	Chlorocebus_sabaeus
ENSORLG00020011512	rnf113a	77	70.079	ENSCHOG00000008711	-	95	72.047	Choloepus_hoffmanni
ENSORLG00020011512	rnf113a	95	76.623	ENSCPBG00000026980	-	95	76.623	Chrysemys_picta_bellii
ENSORLG00020011512	rnf113a	99	62.883	ENSCING00000009197	-	99	63.804	Ciona_intestinalis
ENSORLG00020011512	rnf113a	82	69.962	ENSCSAVG00000006210	-	92	66.556	Ciona_savignyi
ENSORLG00020011512	rnf113a	97	70.440	ENSCANG00000037715	RNF113A	93	71.069	Colobus_angolensis_palliatus
ENSORLG00020011512	rnf113a	95	58.576	ENSCANG00000041552	RNF113B	96	58.900	Colobus_angolensis_palliatus
ENSORLG00020011512	rnf113a	96	70.755	ENSCGRG00001002251	Rnf113a1	93	71.384	Cricetulus_griseus_chok1gshd
ENSORLG00020011512	rnf113a	95	70.192	ENSCGRG00000016675	Rnf113a2	93	70.513	Cricetulus_griseus_crigri
ENSORLG00020011512	rnf113a	96	70.440	ENSCGRG00000019441	Rnf113a1	93	71.069	Cricetulus_griseus_crigri
ENSORLG00020011512	rnf113a	100	89.375	ENSCSEG00000021570	rnf113a	86	89.375	Cynoglossus_semilaevis
ENSORLG00020011512	rnf113a	100	85.312	ENSCVAG00000011305	rnf113a	99	85.312	Cyprinodon_variegatus
ENSORLG00020011512	rnf113a	100	84.112	ENSDARG00000037930	rnf113a	99	84.112	Danio_rerio
ENSORLG00020011512	rnf113a	98	68.923	ENSDORG00000027624	Rnf113a2	96	69.969	Dipodomys_ordii
ENSORLG00020011512	rnf113a	94	58.044	FBgn0038772	mdlc	89	58.438	Drosophila_melanogaster
ENSORLG00020011512	rnf113a	97	70.886	ENSETEG00000018346	-	93	71.835	Echinops_telfairi
ENSORLG00020011512	rnf113a	96	73.616	ENSEBUG00000016079	rnf113a	94	73.616	Eptatretus_burgeri
ENSORLG00020011512	rnf113a	97	67.398	ENSEASG00005010538	-	93	68.339	Equus_asinus_asinus
ENSORLG00020011512	rnf113a	97	71.787	ENSECAG00000003934	-	93	71.787	Equus_caballus
ENSORLG00020011512	rnf113a	93	68.506	ENSECAG00000004638	-	96	69.579	Equus_caballus
ENSORLG00020011512	rnf113a	100	85.358	ENSELUG00000020657	rnf113a	99	85.358	Esox_lucius
ENSORLG00020011512	rnf113a	95	69.206	ENSFCAG00000028962	-	91	69.206	Felis_catus
ENSORLG00020011512	rnf113a	97	70.755	ENSFCAG00000025700	-	93	71.384	Felis_catus
ENSORLG00020011512	rnf113a	97	70.440	ENSFCAG00000024392	-	90	71.069	Felis_catus
ENSORLG00020011512	rnf113a	85	80.072	ENSFALG00000004633	-	95	77.083	Ficedula_albicollis
ENSORLG00020011512	rnf113a	100	88.438	ENSFHEG00000023305	rnf113a	99	88.438	Fundulus_heteroclitus
ENSORLG00020011512	rnf113a	99	80.243	ENSGMOG00000004541	rnf113a	99	80.243	Gadus_morhua
ENSORLG00020011512	rnf113a	93	77.741	ENSGALG00000000538	RNF113A	94	75.974	Gallus_gallus
ENSORLG00020011512	rnf113a	100	85.981	ENSGAFG00000011863	rnf113a	99	85.981	Gambusia_affinis
ENSORLG00020011512	rnf113a	99	86.154	ENSGACG00000009738	rnf113a	99	86.154	Gasterosteus_aculeatus
ENSORLG00020011512	rnf113a	95	75.325	ENSGAGG00000020490	-	95	75.325	Gopherus_agassizii
ENSORLG00020011512	rnf113a	97	70.440	ENSGGOG00000002324	RNF113A	93	71.069	Gorilla_gorilla
ENSORLG00020011512	rnf113a	95	59.609	ENSGGOG00000023052	RNF113B	94	59.609	Gorilla_gorilla
ENSORLG00020011512	rnf113a	100	87.850	ENSHBUG00000008626	rnf113a	99	87.850	Haplochromis_burtoni
ENSORLG00020011512	rnf113a	97	69.937	ENSHGLG00000019571	-	93	70.886	Heterocephalus_glaber_female
ENSORLG00020011512	rnf113a	97	68.944	ENSHGLG00100019582	-	93	69.876	Heterocephalus_glaber_male
ENSORLG00020011512	rnf113a	100	85.981	ENSHCOG00000003421	rnf113a	99	85.981	Hippocampus_comes
ENSORLG00020011512	rnf113a	100	84.735	ENSIPUG00000013431	RNF113A	99	84.735	Ictalurus_punctatus
ENSORLG00020011512	rnf113a	94	71.154	ENSSTOG00000019866	-	91	71.474	Ictidomys_tridecemlineatus
ENSORLG00020011512	rnf113a	66	62.621	ENSJJAG00000019849	Rnf113a1	90	55.336	Jaculus_jaculus
ENSORLG00020011512	rnf113a	100	88.438	ENSKMAG00000009830	rnf113a	99	88.438	Kryptolebias_marmoratus
ENSORLG00020011512	rnf113a	100	88.162	ENSLBEG00000004627	rnf113a	99	88.162	Labrus_bergylta
ENSORLG00020011512	rnf113a	96	79.355	ENSLACG00000013178	rnf113a	95	79.355	Latimeria_chalumnae
ENSORLG00020011512	rnf113a	96	81.877	ENSLOCG00000011785	rnf113a	96	81.877	Lepisosteus_oculatus
ENSORLG00020011512	rnf113a	97	68.770	ENSLAFG00000013906	-	93	70.662	Loxodonta_africana
ENSORLG00020011512	rnf113a	94	71.383	ENSMFAG00000018472	RNF113A	90	72.026	Macaca_fascicularis
ENSORLG00020011512	rnf113a	94	71.383	ENSMMUG00000020223	RNF113A	90	72.026	Macaca_mulatta
ENSORLG00020011512	rnf113a	94	71.383	ENSMNEG00000019778	RNF113A	90	72.026	Macaca_nemestrina
ENSORLG00020011512	rnf113a	94	71.383	ENSMLEG00000020750	RNF113A	90	72.026	Mandrillus_leucophaeus
ENSORLG00020011512	rnf113a	89	61.232	ENSMLEG00000038757	RNF113B	92	61.232	Mandrillus_leucophaeus
ENSORLG00020011512	rnf113a	100	87.850	ENSMAMG00000021895	rnf113a	99	87.850	Mastacembelus_armatus
ENSORLG00020011512	rnf113a	100	87.539	ENSMZEG00005023086	rnf113a	99	87.539	Maylandia_zebra
ENSORLG00020011512	rnf113a	85	82.545	ENSMGAG00000001753	-	95	80.783	Meleagris_gallopavo
ENSORLG00020011512	rnf113a	97	69.375	ENSMICG00000001750	-	93	70.938	Microcebus_murinus
ENSORLG00020011512	rnf113a	97	67.398	ENSMICG00000038084	-	92	67.712	Microcebus_murinus
ENSORLG00020011512	rnf113a	99	68.997	ENSMOCG00000005370	-	94	68.997	Microtus_ochrogaster
ENSORLG00020011512	rnf113a	100	89.720	ENSMMOG00000016954	rnf113a	100	89.720	Mola_mola
ENSORLG00020011512	rnf113a	100	80.997	ENSMALG00000007938	rnf113a	99	80.997	Monopterus_albus
ENSORLG00020011512	rnf113a	95	70.192	MGP_CAROLIEiJ_G0017943	Rnf113a2	93	71.154	Mus_caroli
ENSORLG00020011512	rnf113a	97	70.032	ENSMUSG00000036537	Rnf113a1	93	71.293	Mus_musculus
ENSORLG00020011512	rnf113a	95	70.192	ENSMUSG00000098134	Rnf113a2	93	71.154	Mus_musculus
ENSORLG00020011512	rnf113a	95	70.192	MGP_PahariEiJ_G0029702	Rnf113a2	93	71.154	Mus_pahari
ENSORLG00020011512	rnf113a	97	70.570	MGP_PahariEiJ_G0031547	Rnf113a1	93	70.978	Mus_pahari
ENSORLG00020011512	rnf113a	95	70.192	MGP_SPRETEiJ_G0018788	Rnf113a2	93	71.154	Mus_spretus
ENSORLG00020011512	rnf113a	97	70.253	MGP_SPRETEiJ_G0034156	Rnf113a1	93	71.293	Mus_spretus
ENSORLG00020011512	rnf113a	98	69.538	ENSMPUG00000019358	-	94	69.846	Mustela_putorius_furo
ENSORLG00020011512	rnf113a	95	69.620	ENSMLUG00000010856	-	92	69.620	Myotis_lucifugus
ENSORLG00020011512	rnf113a	95	70.126	ENSMLUG00000016812	-	91	71.384	Myotis_lucifugus
ENSORLG00020011512	rnf113a	100	87.539	ENSNBRG00000004314	rnf113a	99	87.539	Neolamprologus_brichardi
ENSORLG00020011512	rnf113a	97	69.811	ENSNLEG00000018333	RNF113A	93	70.440	Nomascus_leucogenys
ENSORLG00020011512	rnf113a	95	59.609	ENSNLEG00000007844	RNF113B	94	59.609	Nomascus_leucogenys
ENSORLG00020011512	rnf113a	97	69.512	ENSMEUG00000001855	-	98	70.427	Notamacropus_eugenii
ENSORLG00020011512	rnf113a	100	86.604	ENSONIG00000000741	rnf113a	99	86.604	Oreochromis_niloticus
ENSORLG00020011512	rnf113a	96	71.154	ENSOANG00000002592	-	93	71.154	Ornithorhynchus_anatinus
ENSORLG00020011512	rnf113a	97	69.906	ENSOCUG00000016207	-	93	70.219	Oryctolagus_cuniculus
ENSORLG00020011512	rnf113a	100	99.688	ENSORLG00000002442	rnf113a	100	99.688	Oryzias_latipes
ENSORLG00020011512	rnf113a	100	99.688	ENSORLG00015004382	rnf113a	100	99.688	Oryzias_latipes_hsok
ENSORLG00020011512	rnf113a	100	96.885	ENSOMEG00000020197	rnf113a	100	96.885	Oryzias_melastigma
ENSORLG00020011512	rnf113a	97	68.770	ENSOGAG00000011638	RNF113B	93	68.770	Otolemur_garnettii
ENSORLG00020011512	rnf113a	97	70.846	ENSOGAG00000031602	RNF113A	93	71.787	Otolemur_garnettii
ENSORLG00020011512	rnf113a	97	63.043	ENSOARG00000015294	-	93	63.354	Ovis_aries
ENSORLG00020011512	rnf113a	97	68.868	ENSOARG00000009771	-	93	70.440	Ovis_aries
ENSORLG00020011512	rnf113a	97	70.440	ENSPPAG00000009537	RNF113A	93	71.069	Pan_paniscus
ENSORLG00020011512	rnf113a	95	59.609	ENSPPAG00000040641	RNF113B	94	59.609	Pan_paniscus
ENSORLG00020011512	rnf113a	97	70.755	ENSPPRG00000011512	-	93	71.384	Panthera_pardus
ENSORLG00020011512	rnf113a	95	70.288	ENSPPRG00000020640	-	91	70.288	Panthera_pardus
ENSORLG00020011512	rnf113a	97	70.755	ENSPTIG00000007986	-	93	71.384	Panthera_tigris_altaica
ENSORLG00020011512	rnf113a	95	59.609	ENSPTRG00000005987	RNF113B	94	59.609	Pan_troglodytes
ENSORLG00020011512	rnf113a	97	70.440	ENSPTRG00000022231	RNF113A	93	71.069	Pan_troglodytes
ENSORLG00020011512	rnf113a	94	71.383	ENSPANG00000011522	RNF113A	90	72.026	Papio_anubis
ENSORLG00020011512	rnf113a	100	83.438	ENSPKIG00000016796	rnf113a	99	83.438	Paramormyrops_kingsleyae
ENSORLG00020011512	rnf113a	91	77.544	ENSPSIG00000012676	-	99	79.094	Pelodiscus_sinensis
ENSORLG00020011512	rnf113a	100	86.957	ENSPMGG00000009668	rnf113a	99	86.957	Periophthalmus_magnuspinnatus
ENSORLG00020011512	rnf113a	99	68.485	ENSPEMG00000002490	Rnf113a1	96	68.788	Peromyscus_maniculatus_bairdii
ENSORLG00020011512	rnf113a	84	78.519	ENSPMAG00000005184	rnf113a	92	78.519	Petromyzon_marinus
ENSORLG00020011512	rnf113a	97	69.789	ENSPCIG00000028916	-	94	70.091	Phascolarctos_cinereus
ENSORLG00020011512	rnf113a	100	86.604	ENSPFOG00000014248	rnf113a	99	86.604	Poecilia_formosa
ENSORLG00020011512	rnf113a	100	86.293	ENSPLAG00000010435	rnf113a	99	86.293	Poecilia_latipinna
ENSORLG00020011512	rnf113a	100	86.293	ENSPMEG00000010641	rnf113a	99	86.293	Poecilia_mexicana
ENSORLG00020011512	rnf113a	100	86.293	ENSPREG00000009900	rnf113a	99	86.293	Poecilia_reticulata
ENSORLG00020011512	rnf113a	97	70.440	ENSPPYG00000020676	RNF113A	93	71.384	Pongo_abelii
ENSORLG00020011512	rnf113a	95	61.238	ENSPPYG00000005460	RNF113B	95	61.238	Pongo_abelii
ENSORLG00020011512	rnf113a	97	69.620	ENSPCAG00000014633	-	92	70.570	Procavia_capensis
ENSORLG00020011512	rnf113a	94	67.846	ENSPCOG00000005671	-	89	68.810	Propithecus_coquereli
ENSORLG00020011512	rnf113a	100	87.539	ENSPNYG00000013863	rnf113a	99	87.539	Pundamilia_nyererei
ENSORLG00020011512	rnf113a	100	86.604	ENSPNAG00000017428	rnf113a	99	86.604	Pygocentrus_nattereri
ENSORLG00020011512	rnf113a	99	68.389	ENSRNOG00000059412	Rnf113a1	96	68.389	Rattus_norvegicus
ENSORLG00020011512	rnf113a	99	68.389	ENSRNOG00000034040	LOC108348079	96	68.389	Rattus_norvegicus
ENSORLG00020011512	rnf113a	97	70.440	ENSRBIG00000017389	RNF113A	93	71.069	Rhinopithecus_bieti
ENSORLG00020011512	rnf113a	95	58.689	ENSRBIG00000036094	RNF113B	95	59.547	Rhinopithecus_bieti
ENSORLG00020011512	rnf113a	95	58.689	ENSRROG00000045661	RNF113B	95	59.547	Rhinopithecus_roxellana
ENSORLG00020011512	rnf113a	97	70.440	ENSRROG00000012149	RNF113A	93	71.069	Rhinopithecus_roxellana
ENSORLG00020011512	rnf113a	97	69.497	ENSSBOG00000017704	RNF113A	93	71.069	Saimiri_boliviensis_boliviensis
ENSORLG00020011512	rnf113a	95	59.283	ENSSBOG00000029719	RNF113B	94	61.039	Saimiri_boliviensis_boliviensis
ENSORLG00020011512	rnf113a	97	69.486	ENSSHAG00000008839	-	94	70.091	Sarcophilus_harrisii
ENSORLG00020011512	rnf113a	100	78.750	ENSSFOG00015016567	rnf113a	98	78.750	Scleropages_formosus
ENSORLG00020011512	rnf113a	100	87.227	ENSSMAG00000009235	rnf113a	99	87.227	Scophthalmus_maximus
ENSORLG00020011512	rnf113a	100	90.343	ENSSDUG00000022244	rnf113a	99	90.343	Seriola_dumerili
ENSORLG00020011512	rnf113a	100	90.343	ENSSLDG00000018582	rnf113a	99	90.343	Seriola_lalandi_dorsalis
ENSORLG00020011512	rnf113a	97	70.807	ENSSARG00000010436	-	94	72.671	Sorex_araneus
ENSORLG00020011512	rnf113a	95	76.623	ENSSPUG00000018786	-	86	76.623	Sphenodon_punctatus
ENSORLG00020011512	rnf113a	100	88.162	ENSSPAG00000013187	rnf113a	99	88.162	Stegastes_partitus
ENSORLG00020011512	rnf113a	97	67.085	ENSSSCG00000032973	-	93	68.966	Sus_scrofa
ENSORLG00020011512	rnf113a	93	77.483	ENSTGUG00000001947	-	94	75.974	Taeniopygia_guttata
ENSORLG00020011512	rnf113a	99	83.228	ENSTRUG00000011142	rnf113a	98	83.228	Takifugu_rubripes
ENSORLG00020011512	rnf113a	99	86.120	ENSTNIG00000014938	rnf113a	98	86.120	Tetraodon_nigroviridis
ENSORLG00020011512	rnf113a	97	69.592	ENSTBEG00000012687	-	93	70.846	Tupaia_belangeri
ENSORLG00020011512	rnf113a	97	69.375	ENSUAMG00000024564	-	94	70.405	Ursus_americanus
ENSORLG00020011512	rnf113a	94	70.096	ENSUMAG00000002167	-	94	71.154	Ursus_maritimus
ENSORLG00020011512	rnf113a	92	68.212	ENSVPAG00000004521	-	95	68.212	Vicugna_pacos
ENSORLG00020011512	rnf113a	97	68.421	ENSVVUG00000011662	-	93	69.659	Vulpes_vulpes
ENSORLG00020011512	rnf113a	54	68.452	ENSVVUG00000004522	-	78	58.190	Vulpes_vulpes
ENSORLG00020011512	rnf113a	100	77.778	ENSXETG00000002042	rnf113a	99	77.778	Xenopus_tropicalis
ENSORLG00020011512	rnf113a	96	86.645	ENSXCOG00000017542	rnf113a	98	86.645	Xiphophorus_couchianus
ENSORLG00020011512	rnf113a	100	86.293	ENSXMAG00000008169	rnf113a	99	86.293	Xiphophorus_maculatus