EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020011621 (Gene tree)
Gene ID: -
Gene Symbol: ddx42
Alias: -
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 42
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 7625 bases
Position: chr8:3727855-3735479
Accession: ZDB-GENE-050706-53
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028239	ResIII	PF04851.15	1.2e-06	1	1
ENSORLP00020010664	ResIII	PF04851.15	1.9e-06	1	1
ENSORLP00020010664	DEAD	PF00270.29	4.8e-48	1	1
ENSORLP00020028239	DEAD	PF00270.29	5e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020017463	-	2643	-	ENSORLP00020010664	880 (aa)	-	-
ENSORLT00020031441	-	3690	-	ENSORLP00020028239	904 (aa)	-	-

Gene Model

Click here to download ENSORLG00020011621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020011621	ddx42	50	36.876	ENSORLG00020008144	-	77	36.722
ENSORLG00020011621	ddx42	65	40.970	ENSORLG00020022093	ddx46	60	40.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011621	ddx42	100	69.825	ENSG00000198231	DDX42	98	77.551	Homo_sapiens
ENSORLG00020011621	ddx42	91	90.821	ENSAPOG00000017675	ddx42	99	88.652	Acanthochromis_polyacanthus
ENSORLG00020011621	ddx42	100	71.519	ENSAMEG00000003200	DDX42	100	71.142	Ailuropoda_melanoleuca
ENSORLG00020011621	ddx42	84	89.700	ENSACIG00000007376	ddx42	99	90.352	Amphilophus_citrinellus
ENSORLG00020011621	ddx42	100	87.296	ENSAOCG00000003520	ddx42	100	88.248	Amphiprion_ocellaris
ENSORLG00020011621	ddx42	100	88.877	ENSAPEG00000000984	ddx42	100	89.399	Amphiprion_percula
ENSORLG00020011621	ddx42	100	87.213	ENSATEG00000022920	ddx42	100	88.306	Anabas_testudineus
ENSORLG00020011621	ddx42	100	71.353	ENSAPLG00000010544	DDX42	100	70.851	Anas_platyrhynchos
ENSORLG00020011621	ddx42	100	73.019	ENSACAG00000003994	DDX42	99	71.966	Anolis_carolinensis
ENSORLG00020011621	ddx42	100	71.945	ENSANAG00000035693	DDX42	98	77.033	Aotus_nancymaae
ENSORLG00020011621	ddx42	100	86.909	ENSACLG00000025113	ddx42	100	89.549	Astatotilapia_calliptera
ENSORLG00020011621	ddx42	81	86.314	ENSAMXG00000011435	ddx42	100	76.667	Astyanax_mexicanus
ENSORLG00020011621	ddx42	100	71.713	ENSBTAG00000021058	DDX42	100	70.633	Bos_taurus
ENSORLG00020011621	ddx42	66	52.830	WBGene00008119	C46F11.4	80	50.989	Caenorhabditis_elegans
ENSORLG00020011621	ddx42	100	71.444	ENSCJAG00000019649	DDX42	97	81.758	Callithrix_jacchus
ENSORLG00020011621	ddx42	100	71.730	ENSCAFG00000012818	DDX42	100	70.719	Canis_familiaris
ENSORLG00020011621	ddx42	100	71.730	ENSCAFG00020026631	DDX42	100	70.719	Canis_lupus_dingo
ENSORLG00020011621	ddx42	100	72.091	ENSCHIG00000014431	DDX42	100	71.822	Capra_hircus
ENSORLG00020011621	ddx42	100	71.005	ENSTSYG00000001380	DDX42	100	70.626	Carlito_syrichta
ENSORLG00020011621	ddx42	73	61.256	ENSCAPG00000013621	DDX42	86	63.133	Cavia_aperea
ENSORLG00020011621	ddx42	100	71.323	ENSCPOG00000005633	DDX42	100	71.505	Cavia_porcellus
ENSORLG00020011621	ddx42	100	66.948	ENSCCAG00000020612	DDX42	87	83.520	Cebus_capucinus
ENSORLG00020011621	ddx42	100	71.882	ENSCATG00000030490	DDX42	100	70.675	Cercocebus_atys
ENSORLG00020011621	ddx42	100	72.553	ENSCLAG00000003497	DDX42	100	72.021	Chinchilla_lanigera
ENSORLG00020011621	ddx42	100	66.872	ENSCSAG00000003914	DDX42	100	67.082	Chlorocebus_sabaeus
ENSORLG00020011621	ddx42	64	83.929	ENSCHOG00000006241	DDX42	61	85.455	Choloepus_hoffmanni
ENSORLG00020011621	ddx42	100	72.584	ENSCPBG00000026682	DDX42	100	71.668	Chrysemys_picta_bellii
ENSORLG00020011621	ddx42	50	66.140	ENSCING00000001837	-	96	66.140	Ciona_intestinalis
ENSORLG00020011621	ddx42	100	71.882	ENSCANG00000034663	DDX42	97	77.415	Colobus_angolensis_palliatus
ENSORLG00020011621	ddx42	100	71.962	ENSCGRG00001009775	Ddx42	100	70.651	Cricetulus_griseus_chok1gshd
ENSORLG00020011621	ddx42	100	71.962	ENSCGRG00000011718	Ddx42	100	70.651	Cricetulus_griseus_crigri
ENSORLG00020011621	ddx42	100	86.513	ENSCSEG00000021574	ddx42	100	86.369	Cynoglossus_semilaevis
ENSORLG00020011621	ddx42	100	87.445	ENSCVAG00000011404	ddx42	100	88.656	Cyprinodon_variegatus
ENSORLG00020011621	ddx42	100	78.349	ENSDARG00000037928	ddx42	100	77.503	Danio_rerio
ENSORLG00020011621	ddx42	100	68.757	ENSDNOG00000007961	DDX42	100	69.132	Dasypus_novemcinctus
ENSORLG00020011621	ddx42	100	65.532	ENSDORG00000004199	Ddx42	100	64.894	Dipodomys_ordii
ENSORLG00020011621	ddx42	68	59.903	FBgn0036104	CG6418	83	57.186	Drosophila_melanogaster
ENSORLG00020011621	ddx42	86	72.087	ENSEBUG00000001155	ddx42	92	72.351	Eptatretus_burgeri
ENSORLG00020011621	ddx42	100	71.982	ENSEASG00005013089	DDX42	89	83.043	Equus_asinus_asinus
ENSORLG00020011621	ddx42	100	70.838	ENSECAG00000022684	DDX42	100	71.067	Equus_caballus
ENSORLG00020011621	ddx42	60	84.554	ENSEEUG00000009144	DDX42	73	88.571	Erinaceus_europaeus
ENSORLG00020011621	ddx42	100	79.274	ENSELUG00000020593	ddx42	100	78.205	Esox_lucius
ENSORLG00020011621	ddx42	100	71.550	ENSFCAG00000003499	DDX42	100	71.247	Felis_catus
ENSORLG00020011621	ddx42	98	72.402	ENSFALG00000004675	DDX42	72	76.063	Ficedula_albicollis
ENSORLG00020011621	ddx42	100	71.718	ENSFDAG00000020516	DDX42	100	71.626	Fukomys_damarensis
ENSORLG00020011621	ddx42	100	89.109	ENSFHEG00000023290	ddx42	100	89.769	Fundulus_heteroclitus
ENSORLG00020011621	ddx42	78	84.136	ENSGMOG00000004595	ddx42	79	83.853	Gadus_morhua
ENSORLG00020011621	ddx42	100	71.053	ENSGALG00000000581	DDX42	100	69.001	Gallus_gallus
ENSORLG00020011621	ddx42	95	88.502	ENSGAFG00000011846	ddx42	97	89.116	Gambusia_affinis
ENSORLG00020011621	ddx42	100	81.120	ENSGACG00000009782	ddx42	100	78.299	Gasterosteus_aculeatus
ENSORLG00020011621	ddx42	100	72.871	ENSGAGG00000024411	DDX42	99	71.534	Gopherus_agassizii
ENSORLG00020011621	ddx42	100	71.776	ENSGGOG00000006779	DDX42	100	70.930	Gorilla_gorilla
ENSORLG00020011621	ddx42	100	86.689	ENSHBUG00000008705	ddx42	100	89.329	Haplochromis_burtoni
ENSORLG00020011621	ddx42	100	69.772	ENSHGLG00000010024	DDX42	100	68.359	Heterocephalus_glaber_female
ENSORLG00020011621	ddx42	94	54.891	ENSHGLG00100007138	-	78	60.754	Heterocephalus_glaber_male
ENSORLG00020011621	ddx42	100	71.308	ENSHGLG00100004479	-	100	70.390	Heterocephalus_glaber_male
ENSORLG00020011621	ddx42	100	75.965	ENSHCOG00000003357	ddx42	100	77.729	Hippocampus_comes
ENSORLG00020011621	ddx42	100	76.144	ENSIPUG00000013327	ddx42	100	77.097	Ictalurus_punctatus
ENSORLG00020011621	ddx42	100	71.975	ENSSTOG00000008922	DDX42	100	71.444	Ictidomys_tridecemlineatus
ENSORLG00020011621	ddx42	100	72.108	ENSJJAG00000011727	Ddx42	100	72.121	Jaculus_jaculus
ENSORLG00020011621	ddx42	100	87.227	ENSKMAG00000009914	ddx42	100	87.185	Kryptolebias_marmoratus
ENSORLG00020011621	ddx42	100	77.717	ENSLBEG00000004687	ddx42	100	77.876	Labrus_bergylta
ENSORLG00020011621	ddx42	99	72.519	ENSLACG00000013476	DDX42	97	72.073	Latimeria_chalumnae
ENSORLG00020011621	ddx42	100	80.130	ENSLOCG00000011764	ddx42	100	80.022	Lepisosteus_oculatus
ENSORLG00020011621	ddx42	100	70.750	ENSLAFG00000003249	DDX42	100	71.053	Loxodonta_africana
ENSORLG00020011621	ddx42	100	71.958	ENSMFAG00000031356	DDX42	100	70.042	Macaca_fascicularis
ENSORLG00020011621	ddx42	100	72.187	ENSMMUG00000016762	DDX42	100	70.304	Macaca_mulatta
ENSORLG00020011621	ddx42	100	71.958	ENSMNEG00000038250	DDX42	100	70.042	Macaca_nemestrina
ENSORLG00020011621	ddx42	100	70.000	ENSMLEG00000043080	DDX42	100	70.251	Mandrillus_leucophaeus
ENSORLG00020011621	ddx42	91	89.952	ENSMAMG00000021888	ddx42	98	87.446	Mastacembelus_armatus
ENSORLG00020011621	ddx42	100	86.909	ENSMZEG00005023103	ddx42	100	89.549	Maylandia_zebra
ENSORLG00020011621	ddx42	100	71.158	ENSMGAG00000001822	DDX42	100	68.898	Meleagris_gallopavo
ENSORLG00020011621	ddx42	77	77.433	ENSMAUG00000020774	-	94	76.587	Mesocricetus_auratus
ENSORLG00020011621	ddx42	100	72.021	ENSMICG00000009952	DDX42	100	71.064	Microcebus_murinus
ENSORLG00020011621	ddx42	100	72.425	ENSMOCG00000015504	Ddx42	100	70.923	Microtus_ochrogaster
ENSORLG00020011621	ddx42	93	84.405	ENSMMOG00000016963	ddx42	85	85.262	Mola_mola
ENSORLG00020011621	ddx42	51	84.222	ENSMODG00000009917	-	98	84.222	Monodelphis_domestica
ENSORLG00020011621	ddx42	100	88.742	ENSMALG00000007800	ddx42	100	88.521	Monopterus_albus
ENSORLG00020011621	ddx42	100	71.975	MGP_CAROLIEiJ_G0017314	Ddx42	100	70.957	Mus_caroli
ENSORLG00020011621	ddx42	100	71.975	ENSMUSG00000020705	Ddx42	100	70.957	Mus_musculus
ENSORLG00020011621	ddx42	74	85.333	MGP_PahariEiJ_G0018444	-	95	85.395	Mus_pahari
ENSORLG00020011621	ddx42	100	72.081	MGP_SPRETEiJ_G0018158	Ddx42	100	71.064	Mus_spretus
ENSORLG00020011621	ddx42	100	70.135	ENSMPUG00000014921	DDX42	100	70.706	Mustela_putorius_furo
ENSORLG00020011621	ddx42	100	70.052	ENSMLUG00000011645	DDX42	100	70.576	Myotis_lucifugus
ENSORLG00020011621	ddx42	100	72.698	ENSNGAG00000021897	Ddx42	100	72.056	Nannospalax_galili
ENSORLG00020011621	ddx42	100	86.034	ENSNBRG00000004466	ddx42	100	87.821	Neolamprologus_brichardi
ENSORLG00020011621	ddx42	100	71.958	ENSNLEG00000004248	DDX42	99	76.705	Nomascus_leucogenys
ENSORLG00020011621	ddx42	76	71.233	ENSMEUG00000013227	-	71	70.719	Notamacropus_eugenii
ENSORLG00020011621	ddx42	100	70.719	ENSOPRG00000014960	DDX42	100	70.601	Ochotona_princeps
ENSORLG00020011621	ddx42	100	69.149	ENSODEG00000007810	DDX42	100	68.723	Octodon_degus
ENSORLG00020011621	ddx42	100	86.689	ENSONIG00000000734	ddx42	100	89.439	Oreochromis_niloticus
ENSORLG00020011621	ddx42	60	83.333	ENSOANG00000000265	DDX42	100	83.333	Ornithorhynchus_anatinus
ENSORLG00020011621	ddx42	95	73.051	ENSOCUG00000004304	DDX42	87	71.194	Oryctolagus_cuniculus
ENSORLG00020011621	ddx42	100	99.558	ENSORLG00000002395	ddx42	100	98.864	Oryzias_latipes
ENSORLG00020011621	ddx42	100	99.336	ENSORLG00015004487	ddx42	100	99.336	Oryzias_latipes_hsok
ENSORLG00020011621	ddx42	100	93.039	ENSOMEG00000020093	ddx42	100	93.039	Oryzias_melastigma
ENSORLG00020011621	ddx42	100	71.188	ENSOGAG00000006872	DDX42	100	70.706	Otolemur_garnettii
ENSORLG00020011621	ddx42	100	70.293	ENSOARG00000013540	DDX42	100	69.990	Ovis_aries
ENSORLG00020011621	ddx42	100	71.776	ENSPPAG00000007496	DDX42	98	76.714	Pan_paniscus
ENSORLG00020011621	ddx42	100	71.656	ENSPPRG00000002740	DDX42	100	71.247	Panthera_pardus
ENSORLG00020011621	ddx42	100	70.657	ENSPTIG00000009932	DDX42	100	71.247	Panthera_tigris_altaica
ENSORLG00020011621	ddx42	100	71.776	ENSPTRG00000009523	DDX42	98	76.714	Pan_troglodytes
ENSORLG00020011621	ddx42	100	71.987	ENSPANG00000020990	DDX42	100	70.781	Papio_anubis
ENSORLG00020011621	ddx42	100	77.558	ENSPKIG00000002901	ddx42	100	76.674	Paramormyrops_kingsleyae
ENSORLG00020011621	ddx42	86	79.167	ENSPSIG00000010289	DDX42	94	79.412	Pelodiscus_sinensis
ENSORLG00020011621	ddx42	100	83.183	ENSPMGG00000009323	ddx42	100	83.557	Periophthalmus_magnuspinnatus
ENSORLG00020011621	ddx42	100	70.582	ENSPEMG00000006755	Ddx42	100	70.838	Peromyscus_maniculatus_bairdii
ENSORLG00020011621	ddx42	86	70.732	ENSPMAG00000005580	ddx42	99	72.084	Petromyzon_marinus
ENSORLG00020011621	ddx42	100	71.849	ENSPCIG00000009093	DDX42	100	69.398	Phascolarctos_cinereus
ENSORLG00020011621	ddx42	100	86.159	ENSPFOG00000014104	ddx42	100	87.339	Poecilia_formosa
ENSORLG00020011621	ddx42	100	85.944	ENSPLAG00000010522	ddx42	100	87.124	Poecilia_latipinna
ENSORLG00020011621	ddx42	100	86.277	ENSPMEG00000010744	ddx42	100	86.915	Poecilia_mexicana
ENSORLG00020011621	ddx42	100	85.353	ENSPREG00000009926	ddx42	100	86.392	Poecilia_reticulata
ENSORLG00020011621	ddx42	100	68.252	ENSPPYG00000008531	DDX42	100	68.267	Pongo_abelii
ENSORLG00020011621	ddx42	92	66.098	ENSPCAG00000002474	DDX42	100	66.935	Procavia_capensis
ENSORLG00020011621	ddx42	100	62.943	ENSPCOG00000001559	DDX42	89	73.810	Propithecus_coquereli
ENSORLG00020011621	ddx42	100	69.288	ENSPVAG00000000160	DDX42	100	66.598	Pteropus_vampyrus
ENSORLG00020011621	ddx42	84	84.615	ENSPNYG00000013954	ddx42	97	87.614	Pundamilia_nyererei
ENSORLG00020011621	ddx42	88	81.598	ENSPNAG00000017352	ddx42	100	77.206	Pygocentrus_nattereri
ENSORLG00020011621	ddx42	100	71.322	ENSRNOG00000009474	Ddx42	100	70.469	Rattus_norvegicus
ENSORLG00020011621	ddx42	100	71.882	ENSRBIG00000004781	DDX42	89	83.466	Rhinopithecus_bieti
ENSORLG00020011621	ddx42	100	71.882	ENSRROG00000029794	DDX42	100	70.675	Rhinopithecus_roxellana
ENSORLG00020011621	ddx42	100	71.414	ENSSBOG00000029624	DDX42	98	76.671	Saimiri_boliviensis_boliviensis
ENSORLG00020011621	ddx42	100	72.071	ENSSHAG00000012896	-	100	69.789	Sarcophilus_harrisii
ENSORLG00020011621	ddx42	71	50.376	ENSSHAG00000007919	-	99	48.946	Sarcophilus_harrisii
ENSORLG00020011621	ddx42	86	85.019	ENSSFOG00015014064	ddx42	80	87.567	Scleropages_formosus
ENSORLG00020011621	ddx42	100	88.596	ENSSMAG00000009077	ddx42	100	88.503	Scophthalmus_maximus
ENSORLG00020011621	ddx42	100	88.596	ENSSDUG00000022221	ddx42	100	88.816	Seriola_dumerili
ENSORLG00020011621	ddx42	100	87.638	ENSSLDG00000018483	ddx42	100	87.417	Seriola_lalandi_dorsalis
ENSORLG00020011621	ddx42	100	70.170	ENSSARG00000009847	DDX42	100	70.222	Sorex_araneus
ENSORLG00020011621	ddx42	100	72.660	ENSSPUG00000018806	DDX42	100	71.825	Sphenodon_punctatus
ENSORLG00020011621	ddx42	100	89.231	ENSSPAG00000013055	ddx42	100	89.560	Stegastes_partitus
ENSORLG00020011621	ddx42	85	70.197	ENSSSCG00000017289	DDX42	97	70.323	Sus_scrofa
ENSORLG00020011621	ddx42	100	72.216	ENSTGUG00000001931	DDX42	100	71.792	Taeniopygia_guttata
ENSORLG00020011621	ddx42	100	84.658	ENSTRUG00000010711	ddx42	99	90.359	Takifugu_rubripes
ENSORLG00020011621	ddx42	83	77.097	ENSTBEG00000010159	DDX42	98	76.831	Tupaia_belangeri
ENSORLG00020011621	ddx42	100	71.474	ENSTTRG00000006962	DDX42	100	71.368	Tursiops_truncatus
ENSORLG00020011621	ddx42	100	71.519	ENSUAMG00000007321	DDX42	100	71.142	Ursus_americanus
ENSORLG00020011621	ddx42	100	71.398	ENSUMAG00000017438	DDX42	100	71.019	Ursus_maritimus
ENSORLG00020011621	ddx42	94	72.848	ENSVPAG00000009633	DDX42	94	72.848	Vicugna_pacos
ENSORLG00020011621	ddx42	100	70.755	ENSVVUG00000006095	DDX42	100	70.545	Vulpes_vulpes
ENSORLG00020011621	ddx42	100	71.278	ENSXETG00000003245	ddx42	100	70.285	Xenopus_tropicalis
ENSORLG00020011621	ddx42	84	90.196	ENSXCOG00000017560	ddx42	97	90.980	Xiphophorus_couchianus
ENSORLG00020011621	ddx42	100	90.066	ENSXMAG00000008138	ddx42	100	90.508	Xiphophorus_maculatus