EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020011654 (Gene tree)
Gene ID: -
Gene Symbol: swt1
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 19073 bases
Position: chr4:15250167-15269239
Accession: 101172890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028275	PIN_4	PF13638.6	2.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020031477	-	3383	XM_023954315	ENSORLP00020028275	961 (aa)	XP_023810083	-

Gene Model

Click here to download ENSORLG00020011654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011654	swt1	59	34.079	ENSG00000116668	SWT1	59	34.079	Homo_sapiens
ENSORLG00020011654	swt1	97	50.000	ENSAPOG00000014897	-	99	50.254	Acanthochromis_polyacanthus
ENSORLG00020011654	swt1	59	33.446	ENSAMEG00000013585	SWT1	60	33.446	Ailuropoda_melanoleuca
ENSORLG00020011654	swt1	98	50.355	ENSAOCG00000013932	swt1	99	50.505	Amphiprion_ocellaris
ENSORLG00020011654	swt1	98	50.612	ENSAPEG00000009613	-	99	50.863	Amphiprion_percula
ENSORLG00020011654	swt1	98	50.868	ENSATEG00000018946	swt1	99	50.963	Anabas_testudineus
ENSORLG00020011654	swt1	59	36.788	ENSAPLG00000008607	SWT1	74	36.788	Anas_platyrhynchos
ENSORLG00020011654	swt1	58	34.729	ENSACAG00000002276	SWT1	62	34.790	Anolis_carolinensis
ENSORLG00020011654	swt1	62	33.172	ENSANAG00000027068	SWT1	63	33.172	Aotus_nancymaae
ENSORLG00020011654	swt1	87	62.271	ENSACLG00000009742	swt1	98	62.936	Astatotilapia_calliptera
ENSORLG00020011654	swt1	66	45.283	ENSAMXG00000010971	swt1	61	45.283	Astyanax_mexicanus
ENSORLG00020011654	swt1	59	32.872	ENSCJAG00000005544	SWT1	59	32.872	Callithrix_jacchus
ENSORLG00020011654	swt1	59	33.276	ENSCAFG00000013543	SWT1	60	33.037	Canis_familiaris
ENSORLG00020011654	swt1	59	33.276	ENSCAFG00020015648	SWT1	63	33.276	Canis_lupus_dingo
ENSORLG00020011654	swt1	59	33.844	ENSCHIG00000023511	SWT1	93	33.844	Capra_hircus
ENSORLG00020011654	swt1	59	33.333	ENSTSYG00000010470	SWT1	60	33.333	Carlito_syrichta
ENSORLG00020011654	swt1	54	33.886	ENSCPOG00000014251	SWT1	62	33.886	Cavia_porcellus
ENSORLG00020011654	swt1	62	33.063	ENSCCAG00000033926	SWT1	63	33.063	Cebus_capucinus
ENSORLG00020011654	swt1	59	34.247	ENSCATG00000042210	SWT1	92	34.188	Cercocebus_atys
ENSORLG00020011654	swt1	59	34.247	ENSCLAG00000013959	SWT1	61	34.247	Chinchilla_lanigera
ENSORLG00020011654	swt1	59	34.192	ENSCSAG00000012895	SWT1	60	34.192	Chlorocebus_sabaeus
ENSORLG00020011654	swt1	59	36.986	ENSCPBG00000015691	SWT1	60	36.815	Chrysemys_picta_bellii
ENSORLG00020011654	swt1	59	33.621	ENSCANG00000032207	SWT1	92	33.619	Colobus_angolensis_palliatus
ENSORLG00020011654	swt1	62	34.194	ENSCGRG00001022955	Swt1	66	34.194	Cricetulus_griseus_chok1gshd
ENSORLG00020011654	swt1	62	34.194	ENSCGRG00000010224	Swt1	64	34.194	Cricetulus_griseus_crigri
ENSORLG00020011654	swt1	64	57.556	ENSCSEG00000017352	swt1	92	53.186	Cynoglossus_semilaevis
ENSORLG00020011654	swt1	59	46.354	ENSDARG00000094010	swt1	56	46.354	Danio_rerio
ENSORLG00020011654	swt1	50	34.000	ENSDNOG00000005254	SWT1	57	34.000	Dasypus_novemcinctus
ENSORLG00020011654	swt1	62	32.846	ENSDORG00000010531	Swt1	68	33.225	Dipodomys_ordii
ENSORLG00020011654	swt1	59	33.679	ENSEASG00005005530	SWT1	63	33.679	Equus_asinus_asinus
ENSORLG00020011654	swt1	59	32.530	ENSECAG00000012085	SWT1	63	32.530	Equus_caballus
ENSORLG00020011654	swt1	98	36.574	ENSELUG00000020565	swt1	99	37.055	Esox_lucius
ENSORLG00020011654	swt1	59	32.414	ENSFCAG00000011286	SWT1	60	32.414	Felis_catus
ENSORLG00020011654	swt1	61	35.082	ENSFALG00000003206	SWT1	63	35.082	Ficedula_albicollis
ENSORLG00020011654	swt1	59	34.134	ENSFDAG00000007569	SWT1	61	34.134	Fukomys_damarensis
ENSORLG00020011654	swt1	58	35.456	ENSGALG00000034230	SWT1	62	35.628	Gallus_gallus
ENSORLG00020011654	swt1	94	48.261	ENSGAFG00000007803	-	98	47.638	Gambusia_affinis
ENSORLG00020011654	swt1	62	36.349	ENSGAGG00000025050	SWT1	93	36.953	Gopherus_agassizii
ENSORLG00020011654	swt1	53	33.898	ENSGGOG00000041167	-	89	33.898	Gorilla_gorilla
ENSORLG00020011654	swt1	90	62.111	ENSHBUG00000006188	swt1	98	62.738	Haplochromis_burtoni
ENSORLG00020011654	swt1	59	34.596	ENSHGLG00000006542	SWT1	63	34.596	Heterocephalus_glaber_female
ENSORLG00020011654	swt1	59	34.596	ENSHGLG00100014408	SWT1	61	34.596	Heterocephalus_glaber_male
ENSORLG00020011654	swt1	84	38.386	ENSIPUG00000009113	-	94	35.588	Ictalurus_punctatus
ENSORLG00020011654	swt1	59	33.562	ENSSTOG00000010356	SWT1	61	33.562	Ictidomys_tridecemlineatus
ENSORLG00020011654	swt1	59	34.138	ENSJJAG00000015927	Swt1	63	34.138	Jaculus_jaculus
ENSORLG00020011654	swt1	99	49.246	ENSKMAG00000012533	swt1	99	49.239	Kryptolebias_marmoratus
ENSORLG00020011654	swt1	93	48.936	ENSLBEG00000020663	-	98	48.126	Labrus_bergylta
ENSORLG00020011654	swt1	59	36.897	ENSLACG00000009194	SWT1	79	36.897	Latimeria_chalumnae
ENSORLG00020011654	swt1	59	41.824	ENSLOCG00000001749	swt1	97	40.998	Lepisosteus_oculatus
ENSORLG00020011654	swt1	61	32.843	ENSLAFG00000004346	-	93	33.447	Loxodonta_africana
ENSORLG00020011654	swt1	59	34.021	ENSMFAG00000031793	SWT1	93	34.017	Macaca_fascicularis
ENSORLG00020011654	swt1	58	33.737	ENSMMUG00000013882	SWT1	92	33.737	Macaca_mulatta
ENSORLG00020011654	swt1	59	34.075	ENSMNEG00000035502	SWT1	93	34.075	Macaca_nemestrina
ENSORLG00020011654	swt1	59	33.846	ENSMLEG00000038692	SWT1	92	33.846	Mandrillus_leucophaeus
ENSORLG00020011654	swt1	90	62.111	ENSMZEG00005018489	swt1	98	62.738	Maylandia_zebra
ENSORLG00020011654	swt1	58	35.884	ENSMGAG00000000973	SWT1	93	35.884	Meleagris_gallopavo
ENSORLG00020011654	swt1	62	31.631	ENSMAUG00000007996	Swt1	60	31.631	Mesocricetus_auratus
ENSORLG00020011654	swt1	59	34.138	ENSMICG00000014975	SWT1	60	34.138	Microcebus_murinus
ENSORLG00020011654	swt1	62	34.733	ENSMOCG00000009776	Swt1	63	34.733	Microtus_ochrogaster
ENSORLG00020011654	swt1	64	32.432	ENSMODG00000007472	SWT1	64	32.432	Monodelphis_domestica
ENSORLG00020011654	swt1	98	47.358	ENSMALG00000019308	swt1	99	47.374	Monopterus_albus
ENSORLG00020011654	swt1	59	35.000	MGP_CAROLIEiJ_G0014692	Swt1	63	45.912	Mus_caroli
ENSORLG00020011654	swt1	59	34.596	ENSMUSG00000052748	Swt1	62	45.223	Mus_musculus
ENSORLG00020011654	swt1	59	35.163	MGP_PahariEiJ_G0027928	Swt1	63	45.283	Mus_pahari
ENSORLG00020011654	swt1	59	35.172	MGP_SPRETEiJ_G0015499	Swt1	62	45.860	Mus_spretus
ENSORLG00020011654	swt1	59	33.849	ENSMPUG00000011913	SWT1	60	33.849	Mustela_putorius_furo
ENSORLG00020011654	swt1	62	32.750	ENSMLUG00000001142	SWT1	63	32.750	Myotis_lucifugus
ENSORLG00020011654	swt1	59	33.793	ENSNGAG00000021080	Swt1	63	33.387	Nannospalax_galili
ENSORLG00020011654	swt1	59	33.448	ENSNLEG00000018031	SWT1	59	33.448	Nomascus_leucogenys
ENSORLG00020011654	swt1	82	60.870	ENSONIG00000009994	swt1	98	60.870	Oreochromis_niloticus
ENSORLG00020011654	swt1	58	33.846	ENSOANG00000001013	-	69	33.846	Ornithorhynchus_anatinus
ENSORLG00020011654	swt1	59	33.846	ENSOCUG00000004901	SWT1	61	33.846	Oryctolagus_cuniculus
ENSORLG00020011654	swt1	100	96.781	ENSORLG00000009682	swt1	100	96.781	Oryzias_latipes
ENSORLG00020011654	swt1	99	96.667	ENSORLG00015007734	swt1	100	96.667	Oryzias_latipes_hsok
ENSORLG00020011654	swt1	98	71.677	ENSOMEG00000006607	swt1	99	71.805	Oryzias_melastigma
ENSORLG00020011654	swt1	67	32.576	ENSOGAG00000016195	SWT1	68	32.576	Otolemur_garnettii
ENSORLG00020011654	swt1	59	33.621	ENSOARG00000004156	SWT1	59	33.621	Ovis_aries
ENSORLG00020011654	swt1	59	34.079	ENSPPAG00000021400	SWT1	59	34.079	Pan_paniscus
ENSORLG00020011654	swt1	59	32.877	ENSPPRG00000023754	SWT1	60	32.877	Panthera_pardus
ENSORLG00020011654	swt1	59	32.877	ENSPTIG00000021889	SWT1	60	32.877	Panthera_tigris_altaica
ENSORLG00020011654	swt1	59	34.138	ENSPTRG00000001777	SWT1	59	34.079	Pan_troglodytes
ENSORLG00020011654	swt1	59	34.134	ENSPANG00000005099	SWT1	92	34.017	Papio_anubis
ENSORLG00020011654	swt1	60	47.079	ENSPKIG00000005979	swt1	58	47.251	Paramormyrops_kingsleyae
ENSORLG00020011654	swt1	59	36.860	ENSPSIG00000008961	SWT1	60	36.860	Pelodiscus_sinensis
ENSORLG00020011654	swt1	59	34.655	ENSPEMG00000008208	Swt1	59	34.655	Peromyscus_maniculatus_bairdii
ENSORLG00020011654	swt1	62	33.603	ENSPCIG00000002443	SWT1	65	33.026	Phascolarctos_cinereus
ENSORLG00020011654	swt1	99	47.856	ENSPFOG00000010988	-	98	48.032	Poecilia_formosa
ENSORLG00020011654	swt1	99	47.956	ENSPLAG00000022908	-	98	48.133	Poecilia_latipinna
ENSORLG00020011654	swt1	99	47.662	ENSPMEG00000006943	-	98	47.835	Poecilia_mexicana
ENSORLG00020011654	swt1	64	42.707	ENSPREG00000014723	-	87	42.879	Poecilia_reticulata
ENSORLG00020011654	swt1	59	34.079	ENSPPYG00000000415	SWT1	59	34.079	Pongo_abelii
ENSORLG00020011654	swt1	59	31.153	ENSPVAG00000005968	SWT1	60	30.981	Pteropus_vampyrus
ENSORLG00020011654	swt1	90	62.111	ENSPNYG00000012934	swt1	98	62.738	Pundamilia_nyererei
ENSORLG00020011654	swt1	59	48.330	ENSPNAG00000017795	swt1	57	48.330	Pygocentrus_nattereri
ENSORLG00020011654	swt1	59	34.932	ENSRNOG00000032258	Swt1	62	35.103	Rattus_norvegicus
ENSORLG00020011654	swt1	59	33.793	ENSRBIG00000040630	SWT1	92	33.793	Rhinopithecus_bieti
ENSORLG00020011654	swt1	62	32.901	ENSSBOG00000028825	SWT1	63	32.901	Saimiri_boliviensis_boliviensis
ENSORLG00020011654	swt1	59	34.635	ENSSHAG00000009241	SWT1	60	34.635	Sarcophilus_harrisii
ENSORLG00020011654	swt1	59	47.569	ENSSFOG00015004895	swt1	56	47.569	Scleropages_formosus
ENSORLG00020011654	swt1	63	60.920	ENSSMAG00000020761	-	68	61.248	Scophthalmus_maximus
ENSORLG00020011654	swt1	98	50.758	ENSSDUG00000012345	swt1	99	51.217	Seriola_dumerili
ENSORLG00020011654	swt1	98	50.918	ENSSLDG00000003821	swt1	99	51.066	Seriola_lalandi_dorsalis
ENSORLG00020011654	swt1	59	35.556	ENSSPUG00000003899	SWT1	59	35.556	Sphenodon_punctatus
ENSORLG00020011654	swt1	98	51.172	ENSSPAG00000001030	swt1	99	51.316	Stegastes_partitus
ENSORLG00020011654	swt1	59	33.677	ENSSSCG00000015569	SWT1	62	34.021	Sus_scrofa
ENSORLG00020011654	swt1	59	36.332	ENSTGUG00000003718	-	97	36.332	Taeniopygia_guttata
ENSORLG00020011654	swt1	97	42.798	ENSTRUG00000006420	swt1	99	42.798	Takifugu_rubripes
ENSORLG00020011654	swt1	59	33.448	ENSTTRG00000005914	SWT1	60	33.448	Tursiops_truncatus
ENSORLG00020011654	swt1	62	33.011	ENSUAMG00000020937	SWT1	69	33.011	Ursus_americanus
ENSORLG00020011654	swt1	62	33.011	ENSUMAG00000021918	SWT1	65	32.779	Ursus_maritimus
ENSORLG00020011654	swt1	59	33.447	ENSVVUG00000009182	SWT1	62	33.447	Vulpes_vulpes
ENSORLG00020011654	swt1	99	48.196	ENSXMAG00000023472	-	98	48.377	Xiphophorus_maculatus