EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020011818 (Gene tree)
Gene ID: -
Gene Symbol: sfpq
Alias: -
Full Name: splicing factor proline/glutamine-rich
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 10316 bases
Position: chr11:12330251-12340566
Accession: ZDB-GENE-040426-2452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020010898	RRM_1	PF00076.22	4.5e-29	1	2
ENSORLP00020010898	RRM_1	PF00076.22	4.5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020017662	-	2487	-	ENSORLP00020010898	723 (aa)	-	-

Gene Model

Click here to download ENSORLG00020011818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020011818	sfpq	54	55.949	ENSORLG00020003761	nono	90	58.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011818	sfpq	57	72.158	ENSG00000116560	SFPQ	97	68.349	Homo_sapiens
ENSORLG00020011818	sfpq	57	72.158	ENSAMEG00000000815	SFPQ	98	72.158	Ailuropoda_melanoleuca
ENSORLG00020011818	sfpq	100	74.576	ENSACIG00000000905	sfpq	100	85.024	Amphilophus_citrinellus
ENSORLG00020011818	sfpq	68	79.150	ENSAOCG00000002889	sfpq	100	66.975	Amphiprion_ocellaris
ENSORLG00020011818	sfpq	68	79.150	ENSAPEG00000016556	sfpq	100	66.975	Amphiprion_percula
ENSORLG00020011818	sfpq	95	76.891	ENSATEG00000002981	sfpq	100	66.758	Anabas_testudineus
ENSORLG00020011818	sfpq	54	64.128	ENSANAG00000027438	-	88	47.208	Aotus_nancymaae
ENSORLG00020011818	sfpq	100	69.918	ENSACLG00000022332	sfpq	100	69.684	Astatotilapia_calliptera
ENSORLG00020011818	sfpq	62	74.286	ENSAMXG00000011538	sfpq	99	57.703	Astyanax_mexicanus
ENSORLG00020011818	sfpq	57	72.158	ENSCJAG00000001431	SFPQ	86	58.333	Callithrix_jacchus
ENSORLG00020011818	sfpq	57	69.142	ENSCAFG00000018271	-	88	55.272	Canis_familiaris
ENSORLG00020011818	sfpq	57	67.209	ENSCAFG00000017608	-	75	61.598	Canis_familiaris
ENSORLG00020011818	sfpq	57	72.158	ENSCAFG00000003595	-	89	57.643	Canis_familiaris
ENSORLG00020011818	sfpq	57	69.142	ENSCAFG00020004881	-	89	56.219	Canis_lupus_dingo
ENSORLG00020011818	sfpq	57	72.158	ENSCCAG00000029361	-	88	58.110	Cebus_capucinus
ENSORLG00020011818	sfpq	57	49.087	ENSCATG00000032664	-	87	41.342	Cercocebus_atys
ENSORLG00020011818	sfpq	57	72.158	ENSCSAG00000001082	SFPQ	87	57.795	Chlorocebus_sabaeus
ENSORLG00020011818	sfpq	50	70.079	ENSCHOG00000009131	SFPQ	100	70.079	Choloepus_hoffmanni
ENSORLG00020011818	sfpq	58	70.909	ENSCPBG00000018674	SFPQ	68	71.233	Chrysemys_picta_bellii
ENSORLG00020011818	sfpq	57	71.694	ENSCGRG00001011698	Sfpq	87	58.003	Cricetulus_griseus_chok1gshd
ENSORLG00020011818	sfpq	57	71.628	ENSCGRG00000010128	Sfpq	95	71.694	Cricetulus_griseus_crigri
ENSORLG00020011818	sfpq	100	62.978	ENSCSEG00000007852	sfpq	100	62.483	Cynoglossus_semilaevis
ENSORLG00020011818	sfpq	100	67.194	ENSCVAG00000019538	sfpq	100	65.621	Cyprinodon_variegatus
ENSORLG00020011818	sfpq	57	77.804	ENSDARG00000011564	sfpq	100	87.826	Danio_rerio
ENSORLG00020011818	sfpq	57	72.158	ENSDNOG00000049454	SFPQ	86	58.452	Dasypus_novemcinctus
ENSORLG00020011818	sfpq	57	72.158	ENSDORG00000008109	Sfpq	87	58.188	Dipodomys_ordii
ENSORLG00020011818	sfpq	57	65.661	ENSETEG00000001095	SFPQ	61	61.538	Echinops_telfairi
ENSORLG00020011818	sfpq	57	72.158	ENSEASG00005012012	SFPQ	86	59.003	Equus_asinus_asinus
ENSORLG00020011818	sfpq	57	72.158	ENSECAG00000000642	SFPQ	86	59.003	Equus_caballus
ENSORLG00020011818	sfpq	72	65.909	ENSELUG00000023145	sfpq	99	56.534	Esox_lucius
ENSORLG00020011818	sfpq	57	72.158	ENSFCAG00000042862	SFPQ	87	58.682	Felis_catus
ENSORLG00020011818	sfpq	100	67.454	ENSFHEG00000015200	sfpq	100	65.580	Fundulus_heteroclitus
ENSORLG00020011818	sfpq	77	81.340	ENSGMOG00000011950	SFPQ	99	81.579	Gadus_morhua
ENSORLG00020011818	sfpq	79	74.630	ENSGMOG00000011957	sfpq	99	57.981	Gadus_morhua
ENSORLG00020011818	sfpq	58	71.005	ENSGALG00000002514	SFPQ	91	55.687	Gallus_gallus
ENSORLG00020011818	sfpq	100	68.237	ENSGAFG00000014571	sfpq	100	67.158	Gambusia_affinis
ENSORLG00020011818	sfpq	100	65.152	ENSGACG00000002034	sfpq	100	66.575	Gasterosteus_aculeatus
ENSORLG00020011818	sfpq	57	72.158	ENSGGOG00000026354	SFPQ	100	69.886	Gorilla_gorilla
ENSORLG00020011818	sfpq	57	71.198	ENSHGLG00000012001	SFPQ	89	57.369	Heterocephalus_glaber_female
ENSORLG00020011818	sfpq	100	62.681	ENSHCOG00000008612	sfpq	99	75.604	Hippocampus_comes
ENSORLG00020011818	sfpq	61	69.565	ENSIPUG00000013076	SFPQ	78	71.957	Ictalurus_punctatus
ENSORLG00020011818	sfpq	57	72.158	ENSJJAG00000015633	Sfpq	88	57.256	Jaculus_jaculus
ENSORLG00020011818	sfpq	100	66.121	ENSKMAG00000000238	sfpq	100	64.528	Kryptolebias_marmoratus
ENSORLG00020011818	sfpq	100	64.595	ENSLBEG00000003163	sfpq	98	66.846	Labrus_bergylta
ENSORLG00020011818	sfpq	57	67.674	ENSLACG00000014728	SFPQ	93	56.810	Latimeria_chalumnae
ENSORLG00020011818	sfpq	95	52.401	ENSLOCG00000001067	sfpq	72	75.306	Lepisosteus_oculatus
ENSORLG00020011818	sfpq	57	71.926	ENSLAFG00000015951	SFPQ	95	57.870	Loxodonta_africana
ENSORLG00020011818	sfpq	57	72.158	ENSMFAG00000000797	SFPQ	88	57.795	Macaca_fascicularis
ENSORLG00020011818	sfpq	57	72.158	ENSMMUG00000019154	SFPQ	88	57.571	Macaca_mulatta
ENSORLG00020011818	sfpq	57	72.158	ENSMNEG00000038895	SFPQ	88	57.994	Macaca_nemestrina
ENSORLG00020011818	sfpq	100	66.529	ENSMAMG00000007875	sfpq	100	65.757	Mastacembelus_armatus
ENSORLG00020011818	sfpq	100	70.742	ENSMZEG00005026091	sfpq	100	68.956	Maylandia_zebra
ENSORLG00020011818	sfpq	50	68.702	ENSMGAG00000004237	SFPQ	100	68.448	Meleagris_gallopavo
ENSORLG00020011818	sfpq	57	71.694	ENSMAUG00000006402	Sfpq	87	57.845	Mesocricetus_auratus
ENSORLG00020011818	sfpq	57	72.158	ENSMICG00000027265	SFPQ	88	58.019	Microcebus_murinus
ENSORLG00020011818	sfpq	57	69.142	ENSMOCG00000019075	Sfpq	89	69.142	Microtus_ochrogaster
ENSORLG00020011818	sfpq	100	65.337	ENSMMOG00000001074	sfpq	100	65.199	Mola_mola
ENSORLG00020011818	sfpq	57	72.558	ENSMODG00000017937	SFPQ	76	65.143	Monodelphis_domestica
ENSORLG00020011818	sfpq	100	65.840	ENSMALG00000010381	sfpq	100	65.427	Monopterus_albus
ENSORLG00020011818	sfpq	57	71.694	ENSMUSG00000028820	Sfpq	82	56.825	Mus_musculus
ENSORLG00020011818	sfpq	57	71.694	MGP_PahariEiJ_G0028818	Sfpq	82	56.984	Mus_pahari
ENSORLG00020011818	sfpq	57	71.694	MGP_SPRETEiJ_G0027466	Sfpq	82	56.825	Mus_spretus
ENSORLG00020011818	sfpq	57	71.926	ENSMLUG00000027090	SFPQ	99	70.089	Myotis_lucifugus
ENSORLG00020011818	sfpq	57	71.926	ENSNGAG00000000888	Sfpq	88	57.638	Nannospalax_galili
ENSORLG00020011818	sfpq	100	70.014	ENSNBRG00000017479	sfpq	100	69.368	Neolamprologus_brichardi
ENSORLG00020011818	sfpq	57	72.494	ENSMEUG00000014082	SFPQ	61	72.494	Notamacropus_eugenii
ENSORLG00020011818	sfpq	57	72.158	ENSOPRG00000013696	SFPQ	61	72.158	Ochotona_princeps
ENSORLG00020011818	sfpq	100	70.289	ENSONIG00000017737	sfpq	99	69.410	Oreochromis_niloticus
ENSORLG00020011818	sfpq	57	72.158	ENSOCUG00000001877	SFPQ	85	72.158	Oryctolagus_cuniculus
ENSORLG00020011818	sfpq	100	98.064	ENSORLG00000007459	sfpq	100	98.064	Oryzias_latipes
ENSORLG00020011818	sfpq	100	98.619	ENSORLG00015002131	sfpq	100	98.619	Oryzias_latipes_hsok
ENSORLG00020011818	sfpq	100	88.633	ENSOMEG00000018020	sfpq	100	87.686	Oryzias_melastigma
ENSORLG00020011818	sfpq	57	72.158	ENSOGAG00000027710	SFPQ	99	63.653	Otolemur_garnettii
ENSORLG00020011818	sfpq	57	72.158	ENSOARG00000019439	SFPQ	66	72.158	Ovis_aries
ENSORLG00020011818	sfpq	57	72.158	ENSPPAG00000030078	SFPQ	88	57.820	Pan_paniscus
ENSORLG00020011818	sfpq	57	66.357	ENSPTRG00000000518	SFPQ	87	54.075	Pan_troglodytes
ENSORLG00020011818	sfpq	76	63.937	ENSPKIG00000023035	sfpq	73	78.251	Paramormyrops_kingsleyae
ENSORLG00020011818	sfpq	57	72.390	ENSPSIG00000011494	SFPQ	99	72.158	Pelodiscus_sinensis
ENSORLG00020011818	sfpq	88	76.098	ENSPMGG00000023883	sfpq	100	61.140	Periophthalmus_magnuspinnatus
ENSORLG00020011818	sfpq	57	71.694	ENSPEMG00000009794	Sfpq	89	71.694	Peromyscus_maniculatus_bairdii
ENSORLG00020011818	sfpq	57	72.558	ENSPCIG00000000923	SFPQ	99	53.405	Phascolarctos_cinereus
ENSORLG00020011818	sfpq	100	71.039	ENSPFOG00000003127	sfpq	100	64.341	Poecilia_formosa
ENSORLG00020011818	sfpq	100	68.421	ENSPREG00000008060	sfpq	100	66.755	Poecilia_reticulata
ENSORLG00020011818	sfpq	57	72.158	ENSPPYG00000001560	SFPQ	88	57.994	Pongo_abelii
ENSORLG00020011818	sfpq	57	71.628	ENSPCAG00000006164	SFPQ	60	71.628	Procavia_capensis
ENSORLG00020011818	sfpq	57	72.158	ENSPCOG00000027127	SFPQ	88	58.019	Propithecus_coquereli
ENSORLG00020011818	sfpq	57	70.396	ENSPVAG00000001865	SFPQ	87	57.143	Pteropus_vampyrus
ENSORLG00020011818	sfpq	100	69.660	ENSPNYG00000007494	sfpq	100	69.471	Pundamilia_nyererei
ENSORLG00020011818	sfpq	76	66.486	ENSPNAG00000002128	sfpq	92	64.815	Pygocentrus_nattereri
ENSORLG00020011818	sfpq	57	71.694	ENSRNOG00000058461	Sfpq	89	57.656	Rattus_norvegicus
ENSORLG00020011818	sfpq	58	65.148	ENSRBIG00000035286	SFPQ	100	69.886	Rhinopithecus_bieti
ENSORLG00020011818	sfpq	57	69.643	ENSSHAG00000016107	-	96	69.420	Sarcophilus_harrisii
ENSORLG00020011818	sfpq	57	79.858	ENSSFOG00015009289	sfpq	77	80.095	Scleropages_formosus
ENSORLG00020011818	sfpq	95	78.497	ENSSMAG00000018201	sfpq	100	64.754	Scophthalmus_maximus
ENSORLG00020011818	sfpq	100	68.638	ENSSDUG00000008402	sfpq	100	68.501	Seriola_dumerili
ENSORLG00020011818	sfpq	100	68.450	ENSSLDG00000018917	sfpq	100	68.313	Seriola_lalandi_dorsalis
ENSORLG00020011818	sfpq	100	68.501	ENSSPAG00000016550	sfpq	100	69.684	Stegastes_partitus
ENSORLG00020011818	sfpq	57	72.158	ENSSSCG00000035690	SFPQ	87	58.386	Sus_scrofa
ENSORLG00020011818	sfpq	57	71.926	ENSTGUG00000001722	SFPQ	99	71.926	Taeniopygia_guttata
ENSORLG00020011818	sfpq	100	69.061	ENSTRUG00000003783	sfpq	100	67.956	Takifugu_rubripes
ENSORLG00020011818	sfpq	88	66.301	ENSTNIG00000011331	sfpq	99	67.069	Tetraodon_nigroviridis
ENSORLG00020011818	sfpq	57	69.535	ENSTTRG00000013930	SFPQ	61	69.535	Tursiops_truncatus
ENSORLG00020011818	sfpq	67	63.419	ENSXETG00000009682	sfpq	98	76.901	Xenopus_tropicalis
ENSORLG00020011818	sfpq	95	68.936	ENSXMAG00000016391	sfpq	99	68.085	Xiphophorus_maculatus