EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020011942 (Gene tree)
Gene ID: -
Gene Symbol: alyref
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 4652 bases
Position: chr8:14624783-14629434
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020011012	RRM_1	PF00076.22	1.3e-13	1	1
ENSORLP00020011002	RRM_1	PF00076.22	1.5e-13	1	1
ENSORLP00020011002	FYTT	PF07078.11	0.0007	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020031596	-	1945	-	ENSORLP00020011012	270 (aa)	-	-
ENSORLT00020031594	-	855	-	ENSORLP00020011002	284 (aa)	-	-

Gene Model

Click here to download ENSORLG00020011942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020011942	alyref	100	46.181	ENSORLG00020015673	-	100	46.263

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011942	alyref	100	53.818	ENSAPOG00000000183	-	100	50.730	Acanthochromis_polyacanthus
ENSORLG00020011942	alyref	100	47.020	ENSACIG00000020351	-	100	47.735	Amphilophus_citrinellus
ENSORLG00020011942	alyref	99	81.550	ENSACIG00000006351	alyref	98	83.150	Amphilophus_citrinellus
ENSORLG00020011942	alyref	100	82.117	ENSAOCG00000014012	alyref	100	86.496	Amphiprion_ocellaris
ENSORLG00020011942	alyref	100	52.920	ENSAOCG00000019305	-	100	51.095	Amphiprion_ocellaris
ENSORLG00020011942	alyref	100	82.117	ENSAPEG00000014603	alyref	100	86.496	Amphiprion_percula
ENSORLG00020011942	alyref	100	53.650	ENSAPEG00000013527	-	100	51.095	Amphiprion_percula
ENSORLG00020011942	alyref	100	55.072	ENSATEG00000000382	-	100	53.455	Anabas_testudineus
ENSORLG00020011942	alyref	100	79.496	ENSATEG00000004307	alyref	100	84.173	Anabas_testudineus
ENSORLG00020011942	alyref	100	86.182	ENSACLG00000008432	alyref	100	87.273	Astatotilapia_calliptera
ENSORLG00020011942	alyref	100	53.191	ENSACLG00000010184	-	100	49.660	Astatotilapia_calliptera
ENSORLG00020011942	alyref	100	71.786	ENSAMXG00000007359	alyref	100	72.857	Astyanax_mexicanus
ENSORLG00020011942	alyref	99	46.545	ENSCING00000013568	-	99	45.070	Ciona_intestinalis
ENSORLG00020011942	alyref	99	45.588	ENSCSAVG00000003324	-	99	42.804	Ciona_savignyi
ENSORLG00020011942	alyref	100	77.818	ENSCSEG00000017800	alyref	100	80.727	Cynoglossus_semilaevis
ENSORLG00020011942	alyref	100	90.037	ENSCVAG00000014869	alyref	100	88.192	Cyprinodon_variegatus
ENSORLG00020011942	alyref	100	49.265	ENSCVAG00000007789	-	100	46.209	Cyprinodon_variegatus
ENSORLG00020011942	alyref	100	78.571	ENSDARG00000077732	alyref	100	78.571	Danio_rerio
ENSORLG00020011942	alyref	97	44.803	FBgn0010774	Ref1	65	47.778	Drosophila_melanogaster
ENSORLG00020011942	alyref	99	49.813	ENSEBUG00000008253	alyref	96	48.699	Eptatretus_burgeri
ENSORLG00020011942	alyref	71	45.455	ENSEBUG00000006305	alyref	100	39.068	Eptatretus_burgeri
ENSORLG00020011942	alyref	100	70.819	ENSELUG00000008849	-	100	61.672	Esox_lucius
ENSORLG00020011942	alyref	100	74.265	ENSELUG00000017178	alyref	100	72.364	Esox_lucius
ENSORLG00020011942	alyref	58	77.500	ENSFALG00000011923	-	94	74.172	Ficedula_albicollis
ENSORLG00020011942	alyref	100	89.630	ENSFHEG00000019426	alyref	100	87.407	Fundulus_heteroclitus
ENSORLG00020011942	alyref	100	48.718	ENSFHEG00000004698	-	100	47.810	Fundulus_heteroclitus
ENSORLG00020011942	alyref	100	70.588	ENSGMOG00000009882	alyref	100	68.750	Gadus_morhua
ENSORLG00020011942	alyref	68	59.278	ENSGMOG00000013122	-	62	70.248	Gadus_morhua
ENSORLG00020011942	alyref	100	85.662	ENSGAFG00000006014	alyref	100	82.721	Gambusia_affinis
ENSORLG00020011942	alyref	100	46.237	ENSGAFG00000007573	-	100	45.985	Gambusia_affinis
ENSORLG00020011942	alyref	100	86.182	ENSHBUG00000020196	alyref	100	87.273	Haplochromis_burtoni
ENSORLG00020011942	alyref	100	54.093	ENSHBUG00000001454	-	100	50.515	Haplochromis_burtoni
ENSORLG00020011942	alyref	98	48.529	ENSHCOG00000012825	-	96	46.909	Hippocampus_comes
ENSORLG00020011942	alyref	100	74.182	ENSIPUG00000009469	alyref	100	73.551	Ictalurus_punctatus
ENSORLG00020011942	alyref	73	65.327	ENSSTOG00000016570	-	92	62.434	Ictidomys_tridecemlineatus
ENSORLG00020011942	alyref	100	79.927	ENSKMAG00000008912	alyref	100	81.387	Kryptolebias_marmoratus
ENSORLG00020011942	alyref	100	52.015	ENSKMAG00000006462	-	100	50.916	Kryptolebias_marmoratus
ENSORLG00020011942	alyref	100	46.284	ENSLBEG00000005387	-	100	47.241	Labrus_bergylta
ENSORLG00020011942	alyref	100	86.182	ENSLBEG00000023118	alyref	89	85.662	Labrus_bergylta
ENSORLG00020011942	alyref	99	47.810	ENSLBEG00000012930	-	100	44.928	Labrus_bergylta
ENSORLG00020011942	alyref	77	70.370	ENSLOCG00000013879	alyref	89	67.130	Lepisosteus_oculatus
ENSORLG00020011942	alyref	100	50.000	ENSMAMG00000005464	-	100	50.365	Mastacembelus_armatus
ENSORLG00020011942	alyref	100	84.727	ENSMAMG00000003034	alyref	100	81.455	Mastacembelus_armatus
ENSORLG00020011942	alyref	100	52.837	ENSMZEG00005012096	-	100	49.831	Maylandia_zebra
ENSORLG00020011942	alyref	100	86.182	ENSMZEG00005008639	alyref	100	87.273	Maylandia_zebra
ENSORLG00020011942	alyref	99	48.327	ENSMMOG00000007032	-	99	47.794	Mola_mola
ENSORLG00020011942	alyref	99	82.836	ENSMMOG00000012458	alyref	96	83.271	Mola_mola
ENSORLG00020011942	alyref	100	51.027	ENSMALG00000006054	-	100	48.754	Monopterus_albus
ENSORLG00020011942	alyref	98	54.839	ENSMLUG00000022467	-	98	50.896	Myotis_lucifugus
ENSORLG00020011942	alyref	98	56.506	ENSMLUG00000022178	-	98	54.275	Myotis_lucifugus
ENSORLG00020011942	alyref	98	53.763	ENSMLUG00000028605	-	98	52.347	Myotis_lucifugus
ENSORLG00020011942	alyref	100	59.140	ENSMLUG00000004098	-	100	55.714	Myotis_lucifugus
ENSORLG00020011942	alyref	100	60.650	ENSMLUG00000014372	-	100	56.786	Myotis_lucifugus
ENSORLG00020011942	alyref	100	59.857	ENSMLUG00000006521	-	100	55.000	Myotis_lucifugus
ENSORLG00020011942	alyref	98	53.455	ENSMLUG00000009247	-	98	49.084	Myotis_lucifugus
ENSORLG00020011942	alyref	98	58.824	ENSMLUG00000030671	-	98	54.945	Myotis_lucifugus
ENSORLG00020011942	alyref	100	70.370	ENSNGAG00000022014	-	100	62.593	Nannospalax_galili
ENSORLG00020011942	alyref	100	85.818	ENSNBRG00000001747	alyref	100	88.000	Neolamprologus_brichardi
ENSORLG00020011942	alyref	100	53.571	ENSNBRG00000017460	-	100	50.000	Neolamprologus_brichardi
ENSORLG00020011942	alyref	100	82.014	ENSONIG00000019434	alyref	100	85.252	Oreochromis_niloticus
ENSORLG00020011942	alyref	100	55.474	ENSONIG00000003296	-	100	54.015	Oreochromis_niloticus
ENSORLG00020011942	alyref	99	40.063	ENSORLG00000001620	-	58	47.196	Oryzias_latipes
ENSORLG00020011942	alyref	100	48.162	ENSORLG00015015143	-	100	47.331	Oryzias_latipes_hsok
ENSORLG00020011942	alyref	100	99.296	ENSORLG00015022664	alyref	100	99.296	Oryzias_latipes_hsok
ENSORLG00020011942	alyref	100	94.444	ENSOMEG00000019176	alyref	100	91.481	Oryzias_melastigma
ENSORLG00020011942	alyref	99	49.254	ENSOMEG00000007158	-	98	46.296	Oryzias_melastigma
ENSORLG00020011942	alyref	69	77.957	ENSPPAG00000036403	-	68	73.118	Pan_paniscus
ENSORLG00020011942	alyref	99	72.894	ENSPKIG00000006233	-	82	66.304	Paramormyrops_kingsleyae
ENSORLG00020011942	alyref	100	71.956	ENSPKIG00000007070	alyref	100	70.480	Paramormyrops_kingsleyae
ENSORLG00020011942	alyref	73	49.239	ENSPMGG00000012994	-	97	47.396	Periophthalmus_magnuspinnatus
ENSORLG00020011942	alyref	99	81.784	ENSPMGG00000016600	alyref	90	78.439	Periophthalmus_magnuspinnatus
ENSORLG00020011942	alyref	100	64.815	ENSPEMG00000016628	-	100	59.779	Peromyscus_maniculatus_bairdii
ENSORLG00020011942	alyref	100	46.209	ENSPFOG00000017094	-	100	45.818	Poecilia_formosa
ENSORLG00020011942	alyref	100	84.249	ENSPFOG00000022825	alyref	99	84.615	Poecilia_formosa
ENSORLG00020011942	alyref	100	46.209	ENSPLAG00000014380	-	100	45.818	Poecilia_latipinna
ENSORLG00020011942	alyref	100	84.191	ENSPLAG00000006948	alyref	100	81.250	Poecilia_latipinna
ENSORLG00020011942	alyref	100	84.249	ENSPMEG00000003547	alyref	100	84.615	Poecilia_mexicana
ENSORLG00020011942	alyref	100	46.209	ENSPMEG00000023039	-	100	45.818	Poecilia_mexicana
ENSORLG00020011942	alyref	100	84.559	ENSPREG00000015795	alyref	100	81.618	Poecilia_reticulata
ENSORLG00020011942	alyref	100	48.905	ENSPREG00000003649	-	100	47.426	Poecilia_reticulata
ENSORLG00020011942	alyref	100	86.182	ENSPNYG00000017498	alyref	100	87.273	Pundamilia_nyererei
ENSORLG00020011942	alyref	99	50.719	ENSPNYG00000002879	-	98	50.730	Pundamilia_nyererei
ENSORLG00020011942	alyref	100	76.087	ENSPNAG00000002531	alyref	100	73.188	Pygocentrus_nattereri
ENSORLG00020011942	alyref	72	76.531	ENSSBOG00000030924	-	87	71.282	Saimiri_boliviensis_boliviensis
ENSORLG00020011942	alyref	99	55.556	ENSSHAG00000012866	-	99	51.825	Sarcophilus_harrisii
ENSORLG00020011942	alyref	99	55.914	ENSSHAG00000000609	-	99	53.704	Sarcophilus_harrisii
ENSORLG00020011942	alyref	77	79.426	ENSSFOG00015003923	alyref	73	73.333	Scleropages_formosus
ENSORLG00020011942	alyref	69	74.603	ENSSFOG00015003678	alyref	83	71.658	Scleropages_formosus
ENSORLG00020011942	alyref	100	81.752	ENSSMAG00000009283	alyref	100	86.131	Scophthalmus_maximus
ENSORLG00020011942	alyref	100	50.530	ENSSMAG00000011169	-	100	52.736	Scophthalmus_maximus
ENSORLG00020011942	alyref	100	82.847	ENSSDUG00000016158	alyref	100	87.591	Seriola_dumerili
ENSORLG00020011942	alyref	100	81.455	ENSSLDG00000017803	alyref	100	84.000	Seriola_lalandi_dorsalis
ENSORLG00020011942	alyref	99	52.727	ENSSPAG00000017028	-	96	51.301	Stegastes_partitus
ENSORLG00020011942	alyref	100	51.579	ENSTRUG00000003051	-	100	50.714	Takifugu_rubripes
ENSORLG00020011942	alyref	100	76.812	ENSTNIG00000011595	alyref	100	72.826	Tetraodon_nigroviridis
ENSORLG00020011942	alyref	100	50.714	ENSTNIG00000014136	-	100	47.619	Tetraodon_nigroviridis
ENSORLG00020011942	alyref	70	76.316	ENSVVUG00000000272	-	82	73.545	Vulpes_vulpes
ENSORLG00020011942	alyref	99	84.758	ENSXCOG00000018047	alyref	99	80.882	Xiphophorus_couchianus
ENSORLG00020011942	alyref	99	84.758	ENSXMAG00000012218	alyref	99	80.882	Xiphophorus_maculatus
ENSORLG00020011942	alyref	100	46.545	ENSXMAG00000018086	-	100	46.182	Xiphophorus_maculatus