EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020011979 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: -
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 1185 bases
Position: chr18:26122166-26123350
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028481	zf-CCCH	PF00642.24	4e-28	1	4
ENSORLP00020028481	zf-CCCH	PF00642.24	4e-28	2	4
ENSORLP00020028481	zf-CCCH	PF00642.24	4e-28	3	4
ENSORLP00020028481	zf-CCCH	PF00642.24	4e-28	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020017843	-	1099	-	ENSORLP00020028481	297 (aa)	-	-

Gene Model

Click here to download ENSORLG00020011979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020011979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020011979	cth1	89	59.206	ENSAPOG00000012552	cth1	100	58.621	Acanthochromis_polyacanthus
ENSORLG00020011979	cth1	88	61.372	ENSACIG00000016026	cth1	99	58.491	Amphilophus_citrinellus
ENSORLG00020011979	cth1	100	60.577	ENSAOCG00000001644	cth1	100	57.692	Amphiprion_ocellaris
ENSORLG00020011979	cth1	100	60.577	ENSAPEG00000008930	cth1	100	57.692	Amphiprion_percula
ENSORLG00020011979	cth1	99	60.429	ENSATEG00000002281	cth1	97	60.736	Anabas_testudineus
ENSORLG00020011979	cth1	84	59.289	ENSACLG00000015353	cth1	94	59.108	Astatotilapia_calliptera
ENSORLG00020011979	cth1	96	51.572	ENSAMXG00000025717	cth1	99	49.387	Astyanax_mexicanus
ENSORLG00020011979	cth1	100	58.075	ENSCSEG00000014617	cth1	100	59.938	Cynoglossus_semilaevis
ENSORLG00020011979	cth1	100	53.994	ENSCVAG00000001680	cth1	65	54.870	Cyprinodon_variegatus
ENSORLG00020011979	cth1	85	52.837	ENSDARG00000057328	cth1	96	52.229	Danio_rerio
ENSORLG00020011979	cth1	88	52.131	ENSELUG00000012738	cth1	93	49.844	Esox_lucius
ENSORLG00020011979	cth1	100	53.035	ENSFHEG00000022665	cth1	100	53.035	Fundulus_heteroclitus
ENSORLG00020011979	cth1	99	58.033	ENSGMOG00000007360	cth1	100	54.194	Gadus_morhua
ENSORLG00020011979	cth1	100	55.521	ENSGAFG00000019288	cth1	100	53.312	Gambusia_affinis
ENSORLG00020011979	cth1	99	62.583	ENSGACG00000000802	cth1	99	60.465	Gasterosteus_aculeatus
ENSORLG00020011979	cth1	100	57.143	ENSHBUG00000014400	cth1	100	57.000	Haplochromis_burtoni
ENSORLG00020011979	cth1	99	49.498	ENSHCOG00000010276	cth1	99	48.667	Hippocampus_comes
ENSORLG00020011979	cth1	91	56.478	ENSIPUG00000018040	cth1	92	55.150	Ictalurus_punctatus
ENSORLG00020011979	cth1	100	60.714	ENSKMAG00000005944	cth1	100	59.736	Kryptolebias_marmoratus
ENSORLG00020011979	cth1	100	60.625	ENSLBEG00000019253	cth1	100	61.199	Labrus_bergylta
ENSORLG00020011979	cth1	70	52.062	ENSLOCG00000002047	cth1	90	52.062	Lepisosteus_oculatus
ENSORLG00020011979	cth1	88	47.977	ENSMAMG00000001525	cth1	63	55.696	Mastacembelus_armatus
ENSORLG00020011979	cth1	100	58.140	ENSMZEG00005022335	cth1	100	57.426	Maylandia_zebra
ENSORLG00020011979	cth1	94	58.940	ENSMMOG00000020518	cth1	100	58.804	Mola_mola
ENSORLG00020011979	cth1	100	52.674	ENSMALG00000020738	cth1	58	60.455	Monopterus_albus
ENSORLG00020011979	cth1	89	60.300	ENSNBRG00000022789	cth1	88	60.223	Neolamprologus_brichardi
ENSORLG00020011979	cth1	99	58.609	ENSONIG00000021318	cth1	99	58.224	Oreochromis_niloticus
ENSORLG00020011979	cth1	100	98.990	ENSORLG00000022847	cth1	100	98.990	Oryzias_latipes
ENSORLG00020011979	cth1	100	97.980	ENSORLG00015013084	cth1	100	97.980	Oryzias_latipes_hsok
ENSORLG00020011979	cth1	100	68.421	ENSOMEG00000005809	cth1	85	70.957	Oryzias_melastigma
ENSORLG00020011979	cth1	86	51.557	ENSPKIG00000015883	cth1	86	50.865	Paramormyrops_kingsleyae
ENSORLG00020011979	cth1	99	57.055	ENSPMGG00000004275	cth1	96	59.105	Periophthalmus_magnuspinnatus
ENSORLG00020011979	cth1	100	57.595	ENSPFOG00000013583	cth1	94	55.911	Poecilia_formosa
ENSORLG00020011979	cth1	100	57.278	ENSPLAG00000018158	cth1	94	55.591	Poecilia_latipinna
ENSORLG00020011979	cth1	100	57.632	ENSPMEG00000005744	cth1	100	55.911	Poecilia_mexicana
ENSORLG00020011979	cth1	99	57.372	ENSPREG00000004099	cth1	100	55.769	Poecilia_reticulata
ENSORLG00020011979	cth1	91	57.299	ENSPNYG00000016705	cth1	93	57.143	Pundamilia_nyererei
ENSORLG00020011979	cth1	89	56.229	ENSPNAG00000013147	cth1	90	52.189	Pygocentrus_nattereri
ENSORLG00020011979	cth1	91	52.703	ENSSFOG00015017190	cth1	87	50.883	Scleropages_formosus
ENSORLG00020011979	cth1	100	59.202	ENSSMAG00000007977	cth1	100	60.671	Scophthalmus_maximus
ENSORLG00020011979	cth1	100	62.236	ENSSDUG00000004321	cth1	100	62.236	Seriola_dumerili
ENSORLG00020011979	cth1	100	60.843	ENSSLDG00000004516	-	100	62.349	Seriola_lalandi_dorsalis
ENSORLG00020011979	cth1	100	60.843	ENSSLDG00000012760	cth1	100	62.349	Seriola_lalandi_dorsalis
ENSORLG00020011979	cth1	99	61.027	ENSSLDG00000010023	-	100	62.538	Seriola_lalandi_dorsalis
ENSORLG00020011979	cth1	100	58.934	ENSSPAG00000018659	cth1	100	58.491	Stegastes_partitus
ENSORLG00020011979	cth1	100	52.812	ENSTRUG00000012770	cth1	100	54.375	Takifugu_rubripes
ENSORLG00020011979	cth1	100	55.901	ENSTNIG00000000740	cth1	100	54.658	Tetraodon_nigroviridis
ENSORLG00020011979	cth1	82	55.510	ENSXCOG00000003710	cth1	88	53.279	Xiphophorus_couchianus
ENSORLG00020011979	cth1	100	56.508	ENSXMAG00000023885	cth1	100	53.185	Xiphophorus_maculatus