EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020012005 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: -
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 6594 bases
Position: chr5:30151695-30158288
Accession: ZDB-GENE-091204-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020011070	R3H	PF01424.22	2.2e-09	1	1
ENSORLP00020028496	R3H	PF01424.22	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020017878	-	3426	-	ENSORLP00020028496	374 (aa)	-	-
ENSORLT00020017866	-	3037	-	ENSORLP00020011070	374 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012005	r3hcc1	97	33.858	ENSG00000104679	R3HCC1	92	34.115	Homo_sapiens
ENSORLG00020012005	r3hcc1	99	48.139	ENSAPOG00000003616	r3hcc1	89	48.346	Acanthochromis_polyacanthus
ENSORLG00020012005	r3hcc1	97	33.571	ENSAMEG00000002963	R3HCC1	83	33.092	Ailuropoda_melanoleuca
ENSORLG00020012005	r3hcc1	100	43.823	ENSACIG00000017144	r3hcc1	95	43.823	Amphilophus_citrinellus
ENSORLG00020012005	r3hcc1	99	49.257	ENSAOCG00000003945	r3hcc1	96	49.746	Amphiprion_ocellaris
ENSORLG00020012005	r3hcc1	99	49.505	ENSAPEG00000003613	r3hcc1	96	49.746	Amphiprion_percula
ENSORLG00020012005	r3hcc1	97	51.538	ENSATEG00000023860	r3hcc1	99	51.238	Anabas_testudineus
ENSORLG00020012005	r3hcc1	98	34.390	ENSACAG00000016627	R3HCC1	90	34.140	Anolis_carolinensis
ENSORLG00020012005	r3hcc1	99	34.021	ENSANAG00000036169	R3HCC1	92	33.763	Aotus_nancymaae
ENSORLG00020012005	r3hcc1	99	33.806	ENSBTAG00000025830	R3HCC1	89	34.360	Bos_taurus
ENSORLG00020012005	r3hcc1	99	33.499	ENSCJAG00000020118	R3HCC1	92	33.499	Callithrix_jacchus
ENSORLG00020012005	r3hcc1	99	31.981	ENSCAFG00000009210	R3HCC1	87	33.252	Canis_familiaris
ENSORLG00020012005	r3hcc1	80	31.180	ENSCAFG00020012870	R3HCC1	78	31.014	Canis_lupus_dingo
ENSORLG00020012005	r3hcc1	99	33.879	ENSCHIG00000009107	R3HCC1	92	34.524	Capra_hircus
ENSORLG00020012005	r3hcc1	97	34.158	ENSTSYG00000000511	R3HCC1	71	32.924	Carlito_syrichta
ENSORLG00020012005	r3hcc1	92	30.660	ENSCAPG00000015813	R3HCC1	63	38.298	Cavia_aperea
ENSORLG00020012005	r3hcc1	97	33.409	ENSCPOG00000009696	R3HCC1	74	37.799	Cavia_porcellus
ENSORLG00020012005	r3hcc1	99	32.990	ENSCCAG00000037811	R3HCC1	92	32.732	Cebus_capucinus
ENSORLG00020012005	r3hcc1	99	33.773	ENSCATG00000032971	R3HCC1	90	33.947	Cercocebus_atys
ENSORLG00020012005	r3hcc1	99	35.208	ENSCLAG00000015556	R3HCC1	78	34.474	Chinchilla_lanigera
ENSORLG00020012005	r3hcc1	97	31.690	ENSCSAG00000016250	R3HCC1	84	32.524	Chlorocebus_sabaeus
ENSORLG00020012005	r3hcc1	99	33.894	ENSCHOG00000000396	R3HCC1	89	33.654	Choloepus_hoffmanni
ENSORLG00020012005	r3hcc1	97	34.225	ENSCANG00000029441	R3HCC1	90	34.225	Colobus_angolensis_palliatus
ENSORLG00020012005	r3hcc1	72	44.805	ENSCGRG00001014977	R3hcc1	61	43.114	Cricetulus_griseus_chok1gshd
ENSORLG00020012005	r3hcc1	72	44.805	ENSCGRG00000004454	R3hcc1	61	43.114	Cricetulus_griseus_crigri
ENSORLG00020012005	r3hcc1	100	49.500	ENSCSEG00000005748	r3hcc1	96	49.250	Cynoglossus_semilaevis
ENSORLG00020012005	r3hcc1	85	45.198	ENSCVAG00000002640	r3hcc1	94	45.533	Cyprinodon_variegatus
ENSORLG00020012005	r3hcc1	98	40.209	ENSDARG00000099593	r3hcc1	92	40.209	Danio_rerio
ENSORLG00020012005	r3hcc1	97	33.413	ENSDNOG00000007168	R3HCC1	84	33.413	Dasypus_novemcinctus
ENSORLG00020012005	r3hcc1	72	42.667	ENSDORG00000026365	R3hcc1	93	31.910	Dipodomys_ordii
ENSORLG00020012005	r3hcc1	75	45.395	ENSEASG00005018782	R3HCC1	74	33.333	Equus_asinus_asinus
ENSORLG00020012005	r3hcc1	99	33.810	ENSECAG00000025013	R3HCC1	90	33.656	Equus_caballus
ENSORLG00020012005	r3hcc1	97	33.582	ENSEEUG00000011918	R3HCC1	88	33.582	Erinaceus_europaeus
ENSORLG00020012005	r3hcc1	98	42.439	ENSELUG00000023650	r3hcc1	98	42.716	Esox_lucius
ENSORLG00020012005	r3hcc1	99	33.493	ENSFCAG00000012395	R3HCC1	89	33.010	Felis_catus
ENSORLG00020012005	r3hcc1	94	40.741	ENSFDAG00000001572	R3HCC1	93	32.787	Fukomys_damarensis
ENSORLG00020012005	r3hcc1	96	39.835	ENSGMOG00000017590	-	91	40.443	Gadus_morhua
ENSORLG00020012005	r3hcc1	100	52.658	ENSGAFG00000008747	-	93	53.543	Gambusia_affinis
ENSORLG00020012005	r3hcc1	97	51.688	ENSGACG00000008447	r3hcc1	90	51.688	Gasterosteus_aculeatus
ENSORLG00020012005	r3hcc1	99	32.718	ENSGGOG00000013817	R3HCC1	92	32.888	Gorilla_gorilla
ENSORLG00020012005	r3hcc1	72	73.770	ENSHBUG00000022250	-	79	73.770	Haplochromis_burtoni
ENSORLG00020012005	r3hcc1	97	33.577	ENSHGLG00000010517	R3HCC1	84	33.415	Heterocephalus_glaber_female
ENSORLG00020012005	r3hcc1	97	33.577	ENSHGLG00100006388	R3HCC1	84	33.415	Heterocephalus_glaber_male
ENSORLG00020012005	r3hcc1	98	51.630	ENSHCOG00000011745	r3hcc1	88	51.733	Hippocampus_comes
ENSORLG00020012005	r3hcc1	98	43.883	ENSIPUG00000024504	r3hcc1	82	43.883	Ictalurus_punctatus
ENSORLG00020012005	r3hcc1	80	43.226	ENSSTOG00000027130	R3HCC1	64	43.226	Ictidomys_tridecemlineatus
ENSORLG00020012005	r3hcc1	71	44.295	ENSJJAG00000013075	R3hcc1	92	31.702	Jaculus_jaculus
ENSORLG00020012005	r3hcc1	100	50.254	ENSKMAG00000000286	r3hcc1	100	50.384	Kryptolebias_marmoratus
ENSORLG00020012005	r3hcc1	73	46.154	ENSLACG00000011894	R3HCC1	61	46.154	Latimeria_chalumnae
ENSORLG00020012005	r3hcc1	98	40.576	ENSLOCG00000015442	r3hcc1	96	40.576	Lepisosteus_oculatus
ENSORLG00020012005	r3hcc1	85	42.331	ENSLAFG00000016137	R3HCC1	62	42.331	Loxodonta_africana
ENSORLG00020012005	r3hcc1	99	33.673	ENSMFAG00000032894	R3HCC1	90	33.858	Macaca_fascicularis
ENSORLG00020012005	r3hcc1	99	33.929	ENSMMUG00000016655	R3HCC1	90	34.121	Macaca_mulatta
ENSORLG00020012005	r3hcc1	97	34.545	ENSMNEG00000043283	R3HCC1	90	34.383	Macaca_nemestrina
ENSORLG00020012005	r3hcc1	99	34.301	ENSMLEG00000030147	R3HCC1	92	34.301	Mandrillus_leucophaeus
ENSORLG00020012005	r3hcc1	100	49.752	ENSMAMG00000018146	r3hcc1	100	49.261	Mastacembelus_armatus
ENSORLG00020012005	r3hcc1	97	33.415	ENSMGAG00000001356	R3HCC1	84	33.002	Meleagris_gallopavo
ENSORLG00020012005	r3hcc1	70	46.099	ENSMAUG00000016096	R3hcc1	59	43.396	Mesocricetus_auratus
ENSORLG00020012005	r3hcc1	99	33.083	ENSMICG00000011146	R3HCC1	92	34.367	Microcebus_murinus
ENSORLG00020012005	r3hcc1	77	45.517	ENSMOCG00000018508	R3hcc1	60	45.517	Microtus_ochrogaster
ENSORLG00020012005	r3hcc1	100	47.512	ENSMALG00000000731	r3hcc1	100	46.766	Monopterus_albus
ENSORLG00020012005	r3hcc1	82	44.138	MGP_CAROLIEiJ_G0019467	R3hcc1	58	41.718	Mus_caroli
ENSORLG00020012005	r3hcc1	71	44.138	ENSMUSG00000034194	R3hcc1	60	42.442	Mus_musculus
ENSORLG00020012005	r3hcc1	71	43.537	MGP_PahariEiJ_G0030484	R3hcc1	54	43.537	Mus_pahari
ENSORLG00020012005	r3hcc1	71	44.138	MGP_SPRETEiJ_G0020359	R3hcc1	60	42.442	Mus_spretus
ENSORLG00020012005	r3hcc1	99	32.203	ENSMPUG00000003457	R3HCC1	81	32.220	Mustela_putorius_furo
ENSORLG00020012005	r3hcc1	97	33.090	ENSMLUG00000000266	R3HCC1	84	33.578	Myotis_lucifugus
ENSORLG00020012005	r3hcc1	69	46.099	ENSNGAG00000016747	R3hcc1	62	43.030	Nannospalax_galili
ENSORLG00020012005	r3hcc1	74	38.614	ENSNBRG00000016975	-	69	38.284	Neolamprologus_brichardi
ENSORLG00020012005	r3hcc1	99	34.925	ENSMEUG00000010587	R3HCC1	91	35.821	Notamacropus_eugenii
ENSORLG00020012005	r3hcc1	72	41.447	ENSODEG00000007529	R3HCC1	65	39.785	Octodon_degus
ENSORLG00020012005	r3hcc1	97	33.416	ENSOANG00000013877	R3HCC1	89	33.499	Ornithorhynchus_anatinus
ENSORLG00020012005	r3hcc1	78	44.444	ENSOCUG00000023554	R3HCC1	79	33.920	Oryctolagus_cuniculus
ENSORLG00020012005	r3hcc1	100	97.861	ENSORLG00000016816	r3hcc1	100	97.861	Oryzias_latipes
ENSORLG00020012005	r3hcc1	100	97.326	ENSORLG00015007018	r3hcc1	100	97.326	Oryzias_latipes_hsok
ENSORLG00020012005	r3hcc1	100	75.661	ENSOMEG00000000816	r3hcc1	100	74.074	Oryzias_melastigma
ENSORLG00020012005	r3hcc1	97	33.414	ENSOGAG00000001291	R3HCC1	84	35.135	Otolemur_garnettii
ENSORLG00020012005	r3hcc1	99	33.333	ENSOARG00000010146	R3HCC1	90	34.524	Ovis_aries
ENSORLG00020012005	r3hcc1	74	40.741	ENSPPAG00000033165	R3HCC1	90	32.804	Pan_paniscus
ENSORLG00020012005	r3hcc1	99	33.493	ENSPPRG00000002522	R3HCC1	93	32.927	Panthera_pardus
ENSORLG00020012005	r3hcc1	94	34.257	ENSPTIG00000011230	R3HCC1	92	33.676	Panthera_tigris_altaica
ENSORLG00020012005	r3hcc1	97	31.507	ENSPTRG00000020076	R3HCC1	90	32.540	Pan_troglodytes
ENSORLG00020012005	r3hcc1	99	33.760	ENSPANG00000000453	R3HCC1	90	34.121	Papio_anubis
ENSORLG00020012005	r3hcc1	96	46.900	ENSPKIG00000014426	-	96	46.900	Paramormyrops_kingsleyae
ENSORLG00020012005	r3hcc1	96	46.316	ENSPKIG00000020397	-	96	46.316	Paramormyrops_kingsleyae
ENSORLG00020012005	r3hcc1	97	35.714	ENSPSIG00000017664	R3HCC1	90	35.714	Pelodiscus_sinensis
ENSORLG00020012005	r3hcc1	56	52.459	ENSPMGG00000007792	r3hcc1	94	34.524	Periophthalmus_magnuspinnatus
ENSORLG00020012005	r3hcc1	78	44.218	ENSPEMG00000007118	R3hcc1	61	44.218	Peromyscus_maniculatus_bairdii
ENSORLG00020012005	r3hcc1	64	43.066	ENSPCIG00000022718	-	52	43.066	Phascolarctos_cinereus
ENSORLG00020012005	r3hcc1	100	51.899	ENSPFOG00000022301	r3hcc1	87	51.899	Poecilia_formosa
ENSORLG00020012005	r3hcc1	100	51.646	ENSPLAG00000010794	r3hcc1	87	52.152	Poecilia_latipinna
ENSORLG00020012005	r3hcc1	100	51.899	ENSPMEG00000022515	r3hcc1	87	51.899	Poecilia_mexicana
ENSORLG00020012005	r3hcc1	100	51.392	ENSPREG00000000713	r3hcc1	87	51.899	Poecilia_reticulata
ENSORLG00020012005	r3hcc1	94	31.961	ENSPPYG00000018436	R3HCC1	95	32.080	Pongo_abelii
ENSORLG00020012005	r3hcc1	74	43.919	ENSPCAG00000012229	R3HCC1	61	43.919	Procavia_capensis
ENSORLG00020012005	r3hcc1	99	32.741	ENSPCOG00000027554	R3HCC1	92	34.204	Propithecus_coquereli
ENSORLG00020012005	r3hcc1	99	33.413	ENSPVAG00000009829	R3HCC1	89	33.816	Pteropus_vampyrus
ENSORLG00020012005	r3hcc1	96	42.582	ENSPNAG00000023875	r3hcc1	94	42.819	Pygocentrus_nattereri
ENSORLG00020012005	r3hcc1	99	32.398	ENSRBIG00000028045	R3HCC1	90	33.600	Rhinopithecus_bieti
ENSORLG00020012005	r3hcc1	99	32.398	ENSRROG00000031126	R3HCC1	90	33.600	Rhinopithecus_roxellana
ENSORLG00020012005	r3hcc1	99	33.162	ENSSBOG00000022590	R3HCC1	92	32.552	Saimiri_boliviensis_boliviensis
ENSORLG00020012005	r3hcc1	99	44.444	ENSSFOG00015013507	r3hcc1	100	43.939	Scleropages_formosus
ENSORLG00020012005	r3hcc1	100	52.463	ENSSMAG00000008647	r3hcc1	100	52.217	Scophthalmus_maximus
ENSORLG00020012005	r3hcc1	100	53.202	ENSSDUG00000022786	r3hcc1	94	53.941	Seriola_dumerili
ENSORLG00020012005	r3hcc1	100	53.941	ENSSLDG00000019031	r3hcc1	94	54.680	Seriola_lalandi_dorsalis
ENSORLG00020012005	r3hcc1	99	50.882	ENSSPAG00000013497	r3hcc1	96	50.765	Stegastes_partitus
ENSORLG00020012005	r3hcc1	99	33.172	ENSSSCG00000039915	-	90	33.584	Sus_scrofa
ENSORLG00020012005	r3hcc1	97	30.500	ENSSSCG00000037347	-	51	40.141	Sus_scrofa
ENSORLG00020012005	r3hcc1	100	47.074	ENSTRUG00000015880	r3hcc1	95	47.074	Takifugu_rubripes
ENSORLG00020012005	r3hcc1	99	31.643	ENSTTRG00000012247	R3HCC1	89	32.029	Tursiops_truncatus
ENSORLG00020012005	r3hcc1	97	32.274	ENSUAMG00000007344	R3HCC1	91	32.843	Ursus_americanus
ENSORLG00020012005	r3hcc1	97	31.852	ENSVVUG00000005056	R3HCC1	67	33.252	Vulpes_vulpes
ENSORLG00020012005	r3hcc1	97	49.215	ENSXCOG00000017626	r3hcc1	86	50.262	Xiphophorus_couchianus
ENSORLG00020012005	r3hcc1	100	51.646	ENSXMAG00000018375	r3hcc1	93	52.756	Xiphophorus_maculatus