EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020012171 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 4116 bases
Position: chr16:16834353-16838468
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028620	ResIII	PF04851.15	5.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020031699	-	1932	-	ENSORLP00020028620	643 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020012171	rad54b	85	30.245	ENSORLG00020005123	chd1l	53	30.245
ENSORLG00020012171	rad54b	98	45.511	ENSORLG00020006554	rad54l	89	45.511

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012171	rad54b	99	61.978	ENSG00000265817	FSBP	89	61.978	Homo_sapiens
ENSORLG00020012171	rad54b	99	61.978	ENSG00000197275	RAD54B	71	61.978	Homo_sapiens
ENSORLG00020012171	rad54b	99	62.906	ENSAMEG00000005834	-	71	62.906	Ailuropoda_melanoleuca
ENSORLG00020012171	rad54b	100	86.936	ENSACIG00000013005	rad54b	73	86.936	Amphilophus_citrinellus
ENSORLG00020012171	rad54b	100	85.139	ENSAOCG00000008523	rad54b	70	85.139	Amphiprion_ocellaris
ENSORLG00020012171	rad54b	100	85.093	ENSAPEG00000001673	rad54b	74	85.093	Amphiprion_percula
ENSORLG00020012171	rad54b	100	85.426	ENSATEG00000001527	rad54b	74	85.226	Anabas_testudineus
ENSORLG00020012171	rad54b	99	64.441	ENSAPLG00000014366	-	70	64.441	Anas_platyrhynchos
ENSORLG00020012171	rad54b	99	61.515	ENSACAG00000003671	-	80	61.515	Anolis_carolinensis
ENSORLG00020012171	rad54b	99	61.515	ENSANAG00000019528	-	99	61.515	Aotus_nancymaae
ENSORLG00020012171	rad54b	100	87.132	ENSACLG00000007826	rad54b	74	87.442	Astatotilapia_calliptera
ENSORLG00020012171	rad54b	99	69.579	ENSAMXG00000039985	rad54b	76	69.350	Astyanax_mexicanus
ENSORLG00020012171	rad54b	99	62.751	ENSBTAG00000000632	RAD54B	71	62.751	Bos_taurus
ENSORLG00020012171	rad54b	84	38.798	WBGene00013792	Y116A8C.13	76	37.778	Caenorhabditis_elegans
ENSORLG00020012171	rad54b	99	62.442	ENSCJAG00000000080	-	89	62.442	Callithrix_jacchus
ENSORLG00020012171	rad54b	99	63.369	ENSCAFG00000009179	RAD54B	71	63.369	Canis_familiaris
ENSORLG00020012171	rad54b	99	63.369	ENSCAFG00020012084	-	71	63.369	Canis_lupus_dingo
ENSORLG00020012171	rad54b	99	62.751	ENSCHIG00000008230	-	71	62.751	Capra_hircus
ENSORLG00020012171	rad54b	99	62.287	ENSTSYG00000013234	-	71	62.287	Carlito_syrichta
ENSORLG00020012171	rad54b	99	62.404	ENSCPOG00000011643	-	71	62.404	Cavia_porcellus
ENSORLG00020012171	rad54b	99	62.442	ENSCCAG00000011754	-	89	62.442	Cebus_capucinus
ENSORLG00020012171	rad54b	99	62.384	ENSCATG00000030661	-	89	62.384	Cercocebus_atys
ENSORLG00020012171	rad54b	99	62.096	ENSCLAG00000010476	-	73	62.096	Chinchilla_lanigera
ENSORLG00020012171	rad54b	99	62.229	ENSCSAG00000012712	-	71	62.229	Chlorocebus_sabaeus
ENSORLG00020012171	rad54b	99	63.679	ENSCPBG00000003204	-	68	66.038	Chrysemys_picta_bellii
ENSORLG00020012171	rad54b	99	62.539	ENSCANG00000017939	-	89	62.539	Colobus_angolensis_palliatus
ENSORLG00020012171	rad54b	99	62.305	ENSCGRG00001020184	Rad54b	72	62.305	Cricetulus_griseus_chok1gshd
ENSORLG00020012171	rad54b	99	60.903	ENSCGRG00000016752	Rad54b	72	60.903	Cricetulus_griseus_crigri
ENSORLG00020012171	rad54b	99	82.426	ENSCSEG00000001601	rad54b	75	82.426	Cynoglossus_semilaevis
ENSORLG00020012171	rad54b	100	84.186	ENSCVAG00000009200	rad54b	72	84.186	Cyprinodon_variegatus
ENSORLG00020012171	rad54b	99	69.051	ENSDARG00000092134	rad54b	99	69.051	Danio_rerio
ENSORLG00020012171	rad54b	99	62.656	ENSDNOG00000015535	-	70	62.656	Dasypus_novemcinctus
ENSORLG00020012171	rad54b	99	62.712	ENSDORG00000002492	Rad54b	74	62.712	Dipodomys_ordii
ENSORLG00020012171	rad54b	81	66.603	ENSETEG00000010605	-	67	66.603	Echinops_telfairi
ENSORLG00020012171	rad54b	99	51.294	ENSEBUG00000009104	rad54b	70	51.524	Eptatretus_burgeri
ENSORLG00020012171	rad54b	99	62.133	ENSEASG00005004021	-	73	62.133	Equus_asinus_asinus
ENSORLG00020012171	rad54b	99	62.597	ENSECAG00000021949	-	75	62.597	Equus_caballus
ENSORLG00020012171	rad54b	86	54.268	ENSEEUG00000008056	-	62	54.268	Erinaceus_europaeus
ENSORLG00020012171	rad54b	100	78.140	ENSELUG00000009287	rad54b	69	78.140	Esox_lucius
ENSORLG00020012171	rad54b	99	63.174	ENSFCAG00000015513	-	89	63.174	Felis_catus
ENSORLG00020012171	rad54b	99	64.286	ENSFALG00000005467	-	70	64.286	Ficedula_albicollis
ENSORLG00020012171	rad54b	99	61.941	ENSFDAG00000020541	-	71	61.941	Fukomys_damarensis
ENSORLG00020012171	rad54b	100	80.401	ENSFHEG00000014382	rad54b	70	80.401	Fundulus_heteroclitus
ENSORLG00020012171	rad54b	100	81.202	ENSGMOG00000014774	rad54b	81	81.202	Gadus_morhua
ENSORLG00020012171	rad54b	99	64.587	ENSGALG00000043597	RAD54B	69	64.587	Gallus_gallus
ENSORLG00020012171	rad54b	99	85.358	ENSGAFG00000007901	rad54b	74	84.268	Gambusia_affinis
ENSORLG00020012171	rad54b	99	83.981	ENSGACG00000009128	rad54b	70	83.981	Gasterosteus_aculeatus
ENSORLG00020012171	rad54b	99	64.019	ENSGAGG00000018747	-	69	64.019	Gopherus_agassizii
ENSORLG00020012171	rad54b	99	61.978	ENSGGOG00000023516	-	71	61.978	Gorilla_gorilla
ENSORLG00020012171	rad54b	100	87.442	ENSHBUG00000016017	rad54b	69	87.442	Haplochromis_burtoni
ENSORLG00020012171	rad54b	99	61.256	ENSHGLG00000008263	RAD54B	70	61.256	Heterocephalus_glaber_female
ENSORLG00020012171	rad54b	99	60.243	ENSHGLG00100008108	-	71	60.243	Heterocephalus_glaber_male
ENSORLG00020012171	rad54b	99	79.471	ENSHCOG00000004764	rad54b	80	75.566	Hippocampus_comes
ENSORLG00020012171	rad54b	99	69.290	ENSIPUG00000018531	rad54b	68	69.290	Ictalurus_punctatus
ENSORLG00020012171	rad54b	99	61.778	ENSSTOG00000010791	-	70	61.778	Ictidomys_tridecemlineatus
ENSORLG00020012171	rad54b	99	62.191	ENSJJAG00000010314	Rad54b	71	62.191	Jaculus_jaculus
ENSORLG00020012171	rad54b	100	82.481	ENSKMAG00000004744	rad54b	74	82.481	Kryptolebias_marmoratus
ENSORLG00020012171	rad54b	99	67.081	ENSLACG00000000859	-	86	67.081	Latimeria_chalumnae
ENSORLG00020012171	rad54b	99	70.652	ENSLOCG00000010100	rad54b	77	69.939	Lepisosteus_oculatus
ENSORLG00020012171	rad54b	99	62.558	ENSLAFG00000015315	-	80	62.558	Loxodonta_africana
ENSORLG00020012171	rad54b	99	62.384	ENSMFAG00000031629	-	89	62.384	Macaca_fascicularis
ENSORLG00020012171	rad54b	99	62.384	ENSMMUG00000005659	-	71	62.384	Macaca_mulatta
ENSORLG00020012171	rad54b	99	62.384	ENSMNEG00000016408	-	71	62.384	Macaca_nemestrina
ENSORLG00020012171	rad54b	99	62.384	ENSMLEG00000006946	-	71	62.384	Mandrillus_leucophaeus
ENSORLG00020012171	rad54b	100	84.000	ENSMAMG00000012269	rad54b	73	84.000	Mastacembelus_armatus
ENSORLG00020012171	rad54b	100	87.597	ENSMZEG00005005281	rad54b	77	87.442	Maylandia_zebra
ENSORLG00020012171	rad54b	99	64.119	ENSMGAG00000012024	-	69	64.119	Meleagris_gallopavo
ENSORLG00020012171	rad54b	99	61.682	ENSMAUG00000013586	Rad54b	72	61.682	Mesocricetus_auratus
ENSORLG00020012171	rad54b	99	61.669	ENSMICG00000000754	-	74	61.669	Microcebus_murinus
ENSORLG00020012171	rad54b	99	61.395	ENSMOCG00000020035	Rad54b	72	61.455	Microtus_ochrogaster
ENSORLG00020012171	rad54b	99	83.906	ENSMMOG00000003394	rad54b	72	83.906	Mola_mola
ENSORLG00020012171	rad54b	99	62.751	ENSMODG00000007343	-	80	62.751	Monodelphis_domestica
ENSORLG00020012171	rad54b	100	83.204	ENSMALG00000001520	rad54b	100	83.204	Monopterus_albus
ENSORLG00020012171	rad54b	99	62.733	MGP_CAROLIEiJ_G0025810	Rad54b	72	62.733	Mus_caroli
ENSORLG00020012171	rad54b	99	61.646	ENSMUSG00000078773	Rad54b	72	61.646	Mus_musculus
ENSORLG00020012171	rad54b	99	62.267	MGP_PahariEiJ_G0023933	Rad54b	72	62.267	Mus_pahari
ENSORLG00020012171	rad54b	99	62.461	MGP_SPRETEiJ_G0026758	Rad54b	72	62.461	Mus_spretus
ENSORLG00020012171	rad54b	99	62.751	ENSMPUG00000008878	-	79	62.751	Mustela_putorius_furo
ENSORLG00020012171	rad54b	99	62.906	ENSMLUG00000008953	-	71	62.906	Myotis_lucifugus
ENSORLG00020012171	rad54b	99	61.550	ENSNGAG00000017537	Rad54b	71	61.550	Nannospalax_galili
ENSORLG00020012171	rad54b	100	87.907	ENSNBRG00000013394	rad54b	74	87.907	Neolamprologus_brichardi
ENSORLG00020012171	rad54b	99	61.824	ENSNLEG00000003062	-	89	61.824	Nomascus_leucogenys
ENSORLG00020012171	rad54b	76	72.314	ENSMEUG00000012426	-	54	72.314	Notamacropus_eugenii
ENSORLG00020012171	rad54b	99	62.250	ENSODEG00000002650	-	86	62.250	Octodon_degus
ENSORLG00020012171	rad54b	99	62.096	ENSODEG00000019564	-	71	62.096	Octodon_degus
ENSORLG00020012171	rad54b	100	88.372	ENSONIG00000006067	rad54b	70	88.372	Oreochromis_niloticus
ENSORLG00020012171	rad54b	99	63.272	ENSOANG00000011348	-	86	63.272	Ornithorhynchus_anatinus
ENSORLG00020012171	rad54b	99	62.016	ENSOCUG00000016478	-	70	62.016	Oryctolagus_cuniculus
ENSORLG00020012171	rad54b	100	99.533	ENSORLG00000008918	rad54b	100	99.533	Oryzias_latipes
ENSORLG00020012171	rad54b	100	97.214	ENSORLG00015018536	rad54b	69	97.214	Oryzias_latipes_hsok
ENSORLG00020012171	rad54b	100	94.401	ENSOMEG00000004345	rad54b	83	94.401	Oryzias_melastigma
ENSORLG00020012171	rad54b	99	60.842	ENSOGAG00000007854	-	70	60.842	Otolemur_garnettii
ENSORLG00020012171	rad54b	99	62.597	ENSOARG00000007691	-	79	62.597	Ovis_aries
ENSORLG00020012171	rad54b	99	60.433	ENSPPAG00000029572	-	70	60.433	Pan_paniscus
ENSORLG00020012171	rad54b	99	63.060	ENSPPRG00000007571	-	89	63.060	Panthera_pardus
ENSORLG00020012171	rad54b	99	63.060	ENSPTIG00000012670	-	89	63.060	Panthera_tigris_altaica
ENSORLG00020012171	rad54b	99	61.978	ENSPTRG00000020427	-	89	61.978	Pan_troglodytes
ENSORLG00020012171	rad54b	99	62.384	ENSPANG00000019566	-	71	62.384	Papio_anubis
ENSORLG00020012171	rad54b	99	71.362	ENSPKIG00000014974	rad54b	70	71.362	Paramormyrops_kingsleyae
ENSORLG00020012171	rad54b	99	63.679	ENSPSIG00000002383	-	78	63.679	Pelodiscus_sinensis
ENSORLG00020012171	rad54b	99	62.112	ENSPEMG00000012133	Rad54b	72	62.112	Peromyscus_maniculatus_bairdii
ENSORLG00020012171	rad54b	99	59.077	ENSPMAG00000002916	rad54b	80	59.077	Petromyzon_marinus
ENSORLG00020012171	rad54b	99	63.084	ENSPCIG00000020151	-	75	62.617	Phascolarctos_cinereus
ENSORLG00020012171	rad54b	99	85.981	ENSPFOG00000023411	rad54b	68	85.981	Poecilia_formosa
ENSORLG00020012171	rad54b	99	85.514	ENSPLAG00000010430	rad54b	68	85.514	Poecilia_latipinna
ENSORLG00020012171	rad54b	99	85.981	ENSPMEG00000016873	rad54b	75	82.866	Poecilia_mexicana
ENSORLG00020012171	rad54b	99	85.670	ENSPREG00000018443	rad54b	73	85.226	Poecilia_reticulata
ENSORLG00020012171	rad54b	99	61.978	ENSPPYG00000018750	-	71	61.978	Pongo_abelii
ENSORLG00020012171	rad54b	99	61.515	ENSPCOG00000026845	-	89	61.515	Propithecus_coquereli
ENSORLG00020012171	rad54b	99	62.906	ENSPVAG00000000261	-	74	62.906	Pteropus_vampyrus
ENSORLG00020012171	rad54b	100	85.116	ENSPNYG00000018303	rad54b	78	85.116	Pundamilia_nyererei
ENSORLG00020012171	rad54b	99	69.706	ENSPNAG00000000295	rad54b	75	68.934	Pygocentrus_nattereri
ENSORLG00020012171	rad54b	99	61.801	ENSRNOG00000039949	Rad54b	72	61.801	Rattus_norvegicus
ENSORLG00020012171	rad54b	99	61.883	ENSRBIG00000020419	-	71	61.883	Rhinopithecus_bieti
ENSORLG00020012171	rad54b	99	61.883	ENSRROG00000039897	-	71	61.883	Rhinopithecus_roxellana
ENSORLG00020012171	rad54b	86	41.735	YBR073W	RDH54	61	41.735	Saccharomyces_cerevisiae
ENSORLG00020012171	rad54b	99	62.287	ENSSBOG00000028501	-	71	62.287	Saimiri_boliviensis_boliviensis
ENSORLG00020012171	rad54b	99	63.651	ENSSHAG00000017038	-	70	63.651	Sarcophilus_harrisii
ENSORLG00020012171	rad54b	89	71.030	ENSSFOG00015008483	rad54b	89	71.030	Scleropages_formosus
ENSORLG00020012171	rad54b	99	85.226	ENSSMAG00000018659	rad54b	74	84.137	Scophthalmus_maximus
ENSORLG00020012171	rad54b	95	86.526	ENSSDUG00000001122	rad54b	64	86.526	Seriola_dumerili
ENSORLG00020012171	rad54b	100	86.068	ENSSLDG00000013787	rad54b	68	86.068	Seriola_lalandi_dorsalis
ENSORLG00020012171	rad54b	99	63.369	ENSSPUG00000016497	-	73	63.369	Sphenodon_punctatus
ENSORLG00020012171	rad54b	100	85.581	ENSSPAG00000012800	rad54b	73	85.581	Stegastes_partitus
ENSORLG00020012171	rad54b	99	62.133	ENSSSCG00000006101	-	81	62.133	Sus_scrofa
ENSORLG00020012171	rad54b	99	64.706	ENSTGUG00000011880	-	70	64.706	Taeniopygia_guttata
ENSORLG00020012171	rad54b	100	83.101	ENSTRUG00000010015	rad54b	68	83.101	Takifugu_rubripes
ENSORLG00020012171	rad54b	99	57.496	ENSTTRG00000006312	-	71	57.496	Tursiops_truncatus
ENSORLG00020012171	rad54b	99	62.906	ENSUMAG00000016401	-	71	62.906	Ursus_maritimus
ENSORLG00020012171	rad54b	99	62.906	ENSVPAG00000003157	-	71	62.906	Vicugna_pacos
ENSORLG00020012171	rad54b	99	52.851	ENSXETG00000025924	rad54b	80	52.851	Xenopus_tropicalis
ENSORLG00020012171	rad54b	99	84.579	ENSXMAG00000013141	rad54b	74	84.579	Xiphophorus_maculatus