EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020012211 (Gene tree)
Gene ID: -
Gene Symbol: rcl1
Alias: -
Full Name: RNA terminal phosphate cyclase-like 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 10575 bases
Position: chr12:15009082-15019656
Accession: ZDB-GENE-040930-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020011243	RTC	PF01137.21	3.3e-58	1	1
ENSORLP00020028632	RTC	PF01137.21	2.8e-47	1	1
ENSORLP00020028632	RTC_insert	PF05189.13	3.3e-35	1	1
ENSORLP00020011243	RTC_insert	PF05189.13	3.5e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018112	-	5115	-	ENSORLP00020011243	372 (aa)	-	-
ENSORLT00020018137	-	5212	-	ENSORLP00020028632	355 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012211	rcl1	100	76.471	ENSG00000120158	RCL1	96	83.206	Homo_sapiens
ENSORLG00020012211	rcl1	100	88.441	ENSAPOG00000015666	rcl1	100	88.441	Acanthochromis_polyacanthus
ENSORLG00020012211	rcl1	100	77.540	ENSAMEG00000002631	RCL1	100	77.540	Ailuropoda_melanoleuca
ENSORLG00020012211	rcl1	100	88.710	ENSACIG00000021195	rcl1	100	88.710	Amphilophus_citrinellus
ENSORLG00020012211	rcl1	100	88.441	ENSAOCG00000002223	rcl1	100	88.441	Amphiprion_ocellaris
ENSORLG00020012211	rcl1	100	89.247	ENSAPEG00000006905	rcl1	100	89.247	Amphiprion_percula
ENSORLG00020012211	rcl1	100	86.022	ENSATEG00000020026	rcl1	100	86.022	Anabas_testudineus
ENSORLG00020012211	rcl1	88	73.556	ENSAPLG00000006031	RCL1	100	73.556	Anas_platyrhynchos
ENSORLG00020012211	rcl1	100	72.995	ENSACAG00000003640	RCL1	100	72.995	Anolis_carolinensis
ENSORLG00020012211	rcl1	100	75.936	ENSANAG00000037372	RCL1	100	75.936	Aotus_nancymaae
ENSORLG00020012211	rcl1	100	87.097	ENSACLG00000021724	rcl1	100	87.097	Astatotilapia_calliptera
ENSORLG00020012211	rcl1	99	80.163	ENSAMXG00000033394	rcl1	99	80.163	Astyanax_mexicanus
ENSORLG00020012211	rcl1	99	44.709	WBGene00022852	ZK1127.5	99	44.709	Caenorhabditis_elegans
ENSORLG00020012211	rcl1	100	76.203	ENSCJAG00000011202	RCL1	100	76.203	Callithrix_jacchus
ENSORLG00020012211	rcl1	100	77.540	ENSCAFG00000002091	RCL1	100	77.540	Canis_familiaris
ENSORLG00020012211	rcl1	100	77.540	ENSCAFG00020000638	RCL1	78	77.540	Canis_lupus_dingo
ENSORLG00020012211	rcl1	100	76.203	ENSCHIG00000012407	RCL1	100	76.203	Capra_hircus
ENSORLG00020012211	rcl1	88	78.049	ENSTSYG00000009592	RCL1	97	80.220	Carlito_syrichta
ENSORLG00020012211	rcl1	69	65.896	ENSCAPG00000013575	RCL1	100	65.896	Cavia_aperea
ENSORLG00020012211	rcl1	100	75.936	ENSCPOG00000015354	RCL1	100	75.936	Cavia_porcellus
ENSORLG00020012211	rcl1	100	76.203	ENSCCAG00000033505	RCL1	100	76.203	Cebus_capucinus
ENSORLG00020012211	rcl1	100	76.471	ENSCATG00000034721	RCL1	100	76.471	Cercocebus_atys
ENSORLG00020012211	rcl1	100	76.471	ENSCLAG00000007445	RCL1	100	76.471	Chinchilla_lanigera
ENSORLG00020012211	rcl1	100	76.471	ENSCSAG00000008811	RCL1	100	76.471	Chlorocebus_sabaeus
ENSORLG00020012211	rcl1	86	68.421	ENSCHOG00000007216	RCL1	100	68.421	Choloepus_hoffmanni
ENSORLG00020012211	rcl1	100	74.599	ENSCPBG00000025481	RCL1	94	74.848	Chrysemys_picta_bellii
ENSORLG00020012211	rcl1	99	58.378	ENSCING00000019565	-	98	58.378	Ciona_intestinalis
ENSORLG00020012211	rcl1	100	76.471	ENSCANG00000027099	RCL1	100	76.471	Colobus_angolensis_palliatus
ENSORLG00020012211	rcl1	100	77.273	ENSCGRG00001013748	Rcl1	100	77.273	Cricetulus_griseus_chok1gshd
ENSORLG00020012211	rcl1	88	78.419	ENSCGRG00000005843	Rcl1	99	78.419	Cricetulus_griseus_crigri
ENSORLG00020012211	rcl1	100	86.828	ENSCSEG00000000712	rcl1	98	86.828	Cynoglossus_semilaevis
ENSORLG00020012211	rcl1	100	87.366	ENSCVAG00000011536	rcl1	100	87.366	Cyprinodon_variegatus
ENSORLG00020012211	rcl1	99	79.292	ENSDARG00000038312	rcl1	100	79.292	Danio_rerio
ENSORLG00020012211	rcl1	72	76.692	ENSDNOG00000019911	RCL1	100	79.167	Dasypus_novemcinctus
ENSORLG00020012211	rcl1	99	76.965	ENSDORG00000015645	Rcl1	99	76.965	Dipodomys_ordii
ENSORLG00020012211	rcl1	99	52.632	FBgn0020909	Rtc1	99	53.421	Drosophila_melanogaster
ENSORLG00020012211	rcl1	88	54.878	ENSETEG00000014087	-	100	54.878	Echinops_telfairi
ENSORLG00020012211	rcl1	52	31.351	ENSEBUG00000008556	rtca	57	31.351	Eptatretus_burgeri
ENSORLG00020012211	rcl1	100	54.692	ENSEBUG00000016621	-	99	54.692	Eptatretus_burgeri
ENSORLG00020012211	rcl1	100	75.936	ENSEASG00005010653	RCL1	100	75.936	Equus_asinus_asinus
ENSORLG00020012211	rcl1	100	75.936	ENSECAG00000015973	RCL1	100	75.936	Equus_caballus
ENSORLG00020012211	rcl1	99	65.583	ENSEEUG00000009801	RCL1	99	65.583	Erinaceus_europaeus
ENSORLG00020012211	rcl1	100	77.419	ENSELUG00000007353	rcl1	100	77.419	Esox_lucius
ENSORLG00020012211	rcl1	100	76.203	ENSFCAG00000014557	RCL1	100	76.203	Felis_catus
ENSORLG00020012211	rcl1	98	68.132	ENSFALG00000010553	RCL1	96	68.132	Ficedula_albicollis
ENSORLG00020012211	rcl1	88	75.610	ENSFDAG00000004209	RCL1	100	75.610	Fukomys_damarensis
ENSORLG00020012211	rcl1	100	87.634	ENSFHEG00000011228	rcl1	100	87.634	Fundulus_heteroclitus
ENSORLG00020012211	rcl1	100	81.720	ENSGMOG00000004677	rcl1	100	81.720	Gadus_morhua
ENSORLG00020012211	rcl1	99	73.442	ENSGALG00000015024	RCL1	98	73.442	Gallus_gallus
ENSORLG00020012211	rcl1	100	87.097	ENSGAFG00000007257	rcl1	100	87.097	Gambusia_affinis
ENSORLG00020012211	rcl1	100	86.828	ENSGACG00000017474	rcl1	100	86.828	Gasterosteus_aculeatus
ENSORLG00020012211	rcl1	100	74.599	ENSGAGG00000003689	RCL1	100	74.599	Gopherus_agassizii
ENSORLG00020012211	rcl1	100	75.936	ENSGGOG00000015041	RCL1	100	75.936	Gorilla_gorilla
ENSORLG00020012211	rcl1	100	87.366	ENSHBUG00000001393	rcl1	100	87.366	Haplochromis_burtoni
ENSORLG00020012211	rcl1	100	63.636	ENSHGLG00000005368	-	100	63.636	Heterocephalus_glaber_female
ENSORLG00020012211	rcl1	100	75.936	ENSHGLG00000016452	RCL1	100	75.936	Heterocephalus_glaber_female
ENSORLG00020012211	rcl1	100	64.706	ENSHGLG00100018010	-	100	64.706	Heterocephalus_glaber_male
ENSORLG00020012211	rcl1	100	71.390	ENSHGLG00100008718	-	100	71.390	Heterocephalus_glaber_male
ENSORLG00020012211	rcl1	100	86.290	ENSHCOG00000020170	rcl1	100	86.290	Hippocampus_comes
ENSORLG00020012211	rcl1	99	81.471	ENSIPUG00000018054	RCL1	99	81.471	Ictalurus_punctatus
ENSORLG00020012211	rcl1	100	75.936	ENSSTOG00000000023	RCL1	100	75.936	Ictidomys_tridecemlineatus
ENSORLG00020012211	rcl1	99	77.778	ENSJJAG00000022803	-	99	77.778	Jaculus_jaculus
ENSORLG00020012211	rcl1	99	68.564	ENSJJAG00000015632	-	99	68.564	Jaculus_jaculus
ENSORLG00020012211	rcl1	54	60.396	ENSJJAG00000000764	-	98	60.396	Jaculus_jaculus
ENSORLG00020012211	rcl1	100	89.247	ENSKMAG00000011946	rcl1	100	89.247	Kryptolebias_marmoratus
ENSORLG00020012211	rcl1	100	81.989	ENSLBEG00000003957	rcl1	100	81.989	Labrus_bergylta
ENSORLG00020012211	rcl1	93	72.543	ENSLACG00000004594	RCL1	100	76.708	Latimeria_chalumnae
ENSORLG00020012211	rcl1	100	78.763	ENSLOCG00000010148	rcl1	98	78.763	Lepisosteus_oculatus
ENSORLG00020012211	rcl1	99	75.135	ENSLAFG00000017495	RCL1	99	75.135	Loxodonta_africana
ENSORLG00020012211	rcl1	100	76.471	ENSMFAG00000037906	RCL1	100	76.471	Macaca_fascicularis
ENSORLG00020012211	rcl1	100	76.471	ENSMNEG00000012288	RCL1	100	76.471	Macaca_nemestrina
ENSORLG00020012211	rcl1	100	76.471	ENSMLEG00000043088	RCL1	100	76.471	Mandrillus_leucophaeus
ENSORLG00020012211	rcl1	100	87.097	ENSMAMG00000008311	rcl1	100	87.097	Mastacembelus_armatus
ENSORLG00020012211	rcl1	100	87.097	ENSMZEG00005017292	rcl1	100	87.097	Maylandia_zebra
ENSORLG00020012211	rcl1	58	70.909	ENSMGAG00000002245	RCL1	100	70.909	Meleagris_gallopavo
ENSORLG00020012211	rcl1	58	79.630	ENSMAUG00000008922	Rcl1	100	79.630	Mesocricetus_auratus
ENSORLG00020012211	rcl1	100	77.005	ENSMICG00000015562	RCL1	100	77.005	Microcebus_murinus
ENSORLG00020012211	rcl1	100	77.005	ENSMOCG00000012145	Rcl1	100	77.005	Microtus_ochrogaster
ENSORLG00020012211	rcl1	100	84.450	ENSMMOG00000021264	rcl1	100	84.450	Mola_mola
ENSORLG00020012211	rcl1	95	75.562	ENSMODG00000015377	RCL1	94	75.562	Monodelphis_domestica
ENSORLG00020012211	rcl1	100	86.559	ENSMALG00000018618	rcl1	100	86.559	Monopterus_albus
ENSORLG00020012211	rcl1	100	77.005	MGP_CAROLIEiJ_G0022853	Rcl1	100	77.005	Mus_caroli
ENSORLG00020012211	rcl1	100	76.471	ENSMUSG00000024785	Rcl1	100	76.471	Mus_musculus
ENSORLG00020012211	rcl1	100	77.273	MGP_PahariEiJ_G0014346	Rcl1	100	79.532	Mus_pahari
ENSORLG00020012211	rcl1	100	76.471	MGP_SPRETEiJ_G0023771	Rcl1	100	78.947	Mus_spretus
ENSORLG00020012211	rcl1	100	76.738	ENSMPUG00000004998	RCL1	100	76.738	Mustela_putorius_furo
ENSORLG00020012211	rcl1	100	75.668	ENSMLUG00000009654	RCL1	100	75.668	Myotis_lucifugus
ENSORLG00020012211	rcl1	100	76.471	ENSNGAG00000015327	Rcl1	100	76.471	Nannospalax_galili
ENSORLG00020012211	rcl1	92	84.548	ENSNBRG00000019854	rcl1	99	80.992	Neolamprologus_brichardi
ENSORLG00020012211	rcl1	100	73.797	ENSNLEG00000008891	RCL1	100	73.797	Nomascus_leucogenys
ENSORLG00020012211	rcl1	100	69.519	ENSMEUG00000007653	RCL1	100	69.519	Notamacropus_eugenii
ENSORLG00020012211	rcl1	100	75.401	ENSOPRG00000010965	RCL1	100	75.401	Ochotona_princeps
ENSORLG00020012211	rcl1	88	66.061	ENSODEG00000004151	RCL1	96	66.061	Octodon_degus
ENSORLG00020012211	rcl1	100	87.903	ENSONIG00000003871	rcl1	100	87.903	Oreochromis_niloticus
ENSORLG00020012211	rcl1	66	73.494	ENSOANG00000013193	-	98	73.494	Ornithorhynchus_anatinus
ENSORLG00020012211	rcl1	100	76.203	ENSOCUG00000008161	RCL1	100	76.203	Oryctolagus_cuniculus
ENSORLG00020012211	rcl1	78	30.000	ENSORLG00000013605	rtca	79	30.000	Oryzias_latipes
ENSORLG00020012211	rcl1	100	99.194	ENSORLG00000010443	rcl1	100	99.194	Oryzias_latipes
ENSORLG00020012211	rcl1	100	98.925	ENSORLG00015001122	rcl1	100	98.925	Oryzias_latipes_hsok
ENSORLG00020012211	rcl1	100	97.043	ENSOMEG00000022976	rcl1	88	97.043	Oryzias_melastigma
ENSORLG00020012211	rcl1	99	76.423	ENSOGAG00000007480	RCL1	99	76.423	Otolemur_garnettii
ENSORLG00020012211	rcl1	100	76.203	ENSOARG00000013463	RCL1	100	76.203	Ovis_aries
ENSORLG00020012211	rcl1	100	76.738	ENSPPAG00000037958	RCL1	100	76.738	Pan_paniscus
ENSORLG00020012211	rcl1	100	75.668	ENSPPRG00000022645	RCL1	100	75.668	Panthera_pardus
ENSORLG00020012211	rcl1	88	77.064	ENSPTIG00000019031	RCL1	100	77.778	Panthera_tigris_altaica
ENSORLG00020012211	rcl1	100	76.471	ENSPTRG00000020743	RCL1	100	76.471	Pan_troglodytes
ENSORLG00020012211	rcl1	100	76.471	ENSPANG00000025151	RCL1	100	76.471	Papio_anubis
ENSORLG00020012211	rcl1	100	77.688	ENSPKIG00000021022	rcl1	100	77.688	Paramormyrops_kingsleyae
ENSORLG00020012211	rcl1	88	74.468	ENSPSIG00000012302	RCL1	100	74.468	Pelodiscus_sinensis
ENSORLG00020012211	rcl1	100	85.484	ENSPMGG00000024007	rcl1	100	85.484	Periophthalmus_magnuspinnatus
ENSORLG00020012211	rcl1	100	77.273	ENSPEMG00000023275	Rcl1	100	77.273	Peromyscus_maniculatus_bairdii
ENSORLG00020012211	rcl1	78	30.935	ENSPMAG00000009110	rtca	74	30.935	Petromyzon_marinus
ENSORLG00020012211	rcl1	100	75.936	ENSPCIG00000000188	RCL1	100	75.936	Phascolarctos_cinereus
ENSORLG00020012211	rcl1	100	86.828	ENSPFOG00000019682	rcl1	99	86.828	Poecilia_formosa
ENSORLG00020012211	rcl1	100	86.828	ENSPLAG00000022354	rcl1	100	86.828	Poecilia_latipinna
ENSORLG00020012211	rcl1	100	86.828	ENSPMEG00000008131	rcl1	100	86.828	Poecilia_mexicana
ENSORLG00020012211	rcl1	100	86.290	ENSPREG00000008032	rcl1	100	86.290	Poecilia_reticulata
ENSORLG00020012211	rcl1	100	76.203	ENSPPYG00000019244	RCL1	100	76.203	Pongo_abelii
ENSORLG00020012211	rcl1	99	69.189	ENSPCAG00000001440	RCL1	99	69.189	Procavia_capensis
ENSORLG00020012211	rcl1	100	76.738	ENSPCOG00000009611	RCL1	100	76.738	Propithecus_coquereli
ENSORLG00020012211	rcl1	100	75.936	ENSPVAG00000015752	RCL1	100	75.936	Pteropus_vampyrus
ENSORLG00020012211	rcl1	100	87.366	ENSPNYG00000012910	rcl1	100	87.366	Pundamilia_nyererei
ENSORLG00020012211	rcl1	99	81.250	ENSPNAG00000028307	rcl1	91	81.250	Pygocentrus_nattereri
ENSORLG00020012211	rcl1	100	76.471	ENSRNOG00000015491	Rcl1	100	76.471	Rattus_norvegicus
ENSORLG00020012211	rcl1	100	76.203	ENSRBIG00000035818	RCL1	100	76.203	Rhinopithecus_bieti
ENSORLG00020012211	rcl1	100	76.471	ENSRROG00000029781	RCL1	100	76.471	Rhinopithecus_roxellana
ENSORLG00020012211	rcl1	98	37.568	YOL010W	-	97	37.568	Saccharomyces_cerevisiae
ENSORLG00020012211	rcl1	100	76.471	ENSSBOG00000026369	RCL1	100	76.471	Saimiri_boliviensis_boliviensis
ENSORLG00020012211	rcl1	89	77.039	ENSSHAG00000014086	RCL1	100	77.039	Sarcophilus_harrisii
ENSORLG00020012211	rcl1	100	77.688	ENSSFOG00015023020	rcl1	100	77.688	Scleropages_formosus
ENSORLG00020012211	rcl1	100	88.710	ENSSMAG00000019751	rcl1	86	88.710	Scophthalmus_maximus
ENSORLG00020012211	rcl1	100	88.710	ENSSDUG00000006349	rcl1	100	88.710	Seriola_dumerili
ENSORLG00020012211	rcl1	100	87.903	ENSSLDG00000022076	rcl1	100	87.903	Seriola_lalandi_dorsalis
ENSORLG00020012211	rcl1	100	76.471	ENSSARG00000009260	RCL1	100	76.471	Sorex_araneus
ENSORLG00020012211	rcl1	100	74.599	ENSSPUG00000016330	RCL1	100	74.599	Sphenodon_punctatus
ENSORLG00020012211	rcl1	100	88.710	ENSSPAG00000018038	rcl1	100	88.710	Stegastes_partitus
ENSORLG00020012211	rcl1	100	76.471	ENSSSCG00000005217	RCL1	83	76.471	Sus_scrofa
ENSORLG00020012211	rcl1	99	72.237	ENSTGUG00000005138	RCL1	99	72.237	Taeniopygia_guttata
ENSORLG00020012211	rcl1	100	85.484	ENSTRUG00000010493	rcl1	100	85.484	Takifugu_rubripes
ENSORLG00020012211	rcl1	100	83.333	ENSTNIG00000013214	rcl1	99	83.333	Tetraodon_nigroviridis
ENSORLG00020012211	rcl1	100	72.193	ENSTBEG00000016339	RCL1	100	72.193	Tupaia_belangeri
ENSORLG00020012211	rcl1	100	75.936	ENSTTRG00000016525	RCL1	100	75.936	Tursiops_truncatus
ENSORLG00020012211	rcl1	100	77.540	ENSUAMG00000005598	RCL1	100	79.012	Ursus_americanus
ENSORLG00020012211	rcl1	88	78.049	ENSUMAG00000017890	RCL1	97	78.049	Ursus_maritimus
ENSORLG00020012211	rcl1	88	77.744	ENSVPAG00000009188	RCL1	100	77.744	Vicugna_pacos
ENSORLG00020012211	rcl1	88	79.027	ENSVVUG00000007304	RCL1	89	79.027	Vulpes_vulpes
ENSORLG00020012211	rcl1	100	69.067	ENSXETG00000000592	rcl1	100	69.067	Xenopus_tropicalis
ENSORLG00020012211	rcl1	100	87.097	ENSXCOG00000004922	rcl1	100	87.097	Xiphophorus_couchianus
ENSORLG00020012211	rcl1	100	87.097	ENSXMAG00000022366	RCL1	100	87.097	Xiphophorus_maculatus